Neoarius graeffei (lesser salmon catfish): 132887238
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Entry
132887238 CDS
T10798
Symbol
stub1
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04120
Ubiquitin mediated proteolysis
ngra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132887238 (stub1)
04120 Ubiquitin mediated proteolysis
132887238 (stub1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ngra03110
]
132887238 (stub1)
04131 Membrane trafficking [BR:
ngra04131
]
132887238 (stub1)
04121 Ubiquitin system [BR:
ngra04121
]
132887238 (stub1)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132887238 (stub1)
Chaperones and folding catalysts [BR:
ngra03110
]
Other chaperones and cochaperones
Others
132887238 (stub1)
Membrane trafficking [BR:
ngra04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132887238 (stub1)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
U-box type E3
132887238 (stub1)
Multi subunit type E3
STUB1-CHIC2 complex
132887238 (stub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
CHIP_TPR_N
TPR_1
TPR_2
TPR_11
ANAPC3
TPR_8
TPR_16
TPR_12
TPR_17
TPR_BSK1_C
TPR_19
TPR_14
ARM_TT21_C
TPR_7
TPR_9
ARM_TT21_4th
SRP_TPR_like
TPR_CcmH_CycH
TPR_10
Coatomer_E
NRBF2_MIT
Motif
Other DBs
NCBI-GeneID:
132887238
NCBI-ProteinID:
XP_060778734
LinkDB
All DBs
Position
5:complement(110983255..110996595)
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AA seq
286 aa
AA seq
DB search
MAGSPEKSCSSAQELKEHGNRLFLCRKYQEAVTCYSKAINRNPSVAVYYTNRALCYVKLQ
QYDKALADCKHALELDSQSVKAHFFLGQCHLELENYEEAIGNLQRAYNLAKEQRLNFGDD
IPSALRYAKKKRWNSMEEKRISQENELHAYLTKLILAERERELEDYREKQGDDNLSDNDI
SKIKTKHDKYLIDMDELFSQVDEKRKKREIPDYLCGKISFELMREPCITPSGITYDRKDI
EEHLQRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFIQENGWVEDY
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagcccggagaagagctgctcctcagctcaggagctcaaagagcatggcaac
cgcctgttcctctgcaggaagtaccaggaggccgtcacctgctacagcaaagctatcaac
cggaacccatcagttgcggtgtactacactaatagagcgctgtgctatgtcaaactgcag
cagtatgataaggcattggccgactgtaaacacgcgctggagctcgacagccagtcagtg
aaggcacatttcttcctcgggcagtgtcatctggagttggagaactatgaagaggctatc
ggaaatctacaaagagcgtataacctggctaaagagcagcgtctgaactttggcgatgac
attcccagcgccctgcgttacgccaagaagaagcgctggaacagtatggaggaaaagcgc
atcagccaggagaacgagctgcacgcctatctcaccaaactcatcctggctgagagggag
cgggaacttgaagactacagagagaagcagggtgatgacaatctgagcgacaatgacatc
agcaaaatcaaaaccaaacatgataaatatctgattgacatggatgagctcttttcccaa
gtggacgagaagaggaagaagcgagagatcccagactacctgtgtggaaagatcagcttt
gagctaatgagggaaccgtgcatcacaccgagcggcatcacatacgaccgcaaagacatc
gaggagcacctacagcgtgtcggccattttgacccggtgacccgaagtcccctgacccag
gatcagctgatccctaacctggccatgaaggaggtgatcgatgcctttatccaggagaac
ggctgggtggaggactactga
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