Neoarius graeffei (lesser salmon catfish): 132887643
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Entry
132887643 CDS
T10798
Symbol
abcc8b
Name
(RefSeq) ATP-binding cassette sub-family C member 8
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132887643 (abcc8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ngra02000
]
132887643 (abcc8b)
Transporters [BR:
ngra02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
132887643 (abcc8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
nSTAND1
Lipin_mid
DEAD
Motif
Other DBs
NCBI-GeneID:
132887643
NCBI-ProteinID:
XP_060779092
LinkDB
All DBs
Position
6:14437591..14517193
Genome browser
AA seq
1595 aa
AA seq
DB search
MMHGYRATPISNSTLSFCGTDNSSAYKVDNGLLNNGCFLDALGLVPHVFLLFSTFPILFI
GWGSQSSKVHIHHSTWLHFPGHNLRWLLTAALLFVLVCEVAEGIVSDGFNQSRHLHLYMP
AGLGILAAITSIVYYHNIETSNFPKLLLALLIYWILAFVTKTIKFTKYNEHRISLGQLRF
CITGLLALIYGLLLTVEINVILRRRYIFFPHPTEVKPPEDLQDLGVRFLQPFVNLLSKST
YWWMNTFITSAHKQPIHLKTIGKLPIAMRALTNYQKLRKAFNTQKERGMIPARGPRSIWY
ALRQAFGGPLLLSITYRFLADLLGFTGPLCISGIVHHISRDNHTIKSPVKLLGIHFISSQ
AFLANAYVLAVLLFLALLLQRTFLQASYYAAIETGIKIRGAIQCKIYNKIMCLSTSNMSM
GDMTISQICNLVARDTEQLMWFFFLCPNLCAMPVQITIGVILLYYLLGISALIGAAVIAI
LAPMHYFVATQLSRTQKSTLEYSSERLKKTNEMLRGIKLLKLYAWEHIFRSSVEETRKKE
LTSLRAFALYTSLSIFINAAIPIAAVLTTFVVHAYVHSSTDTSLSPAVAFASLSLFHILV
TPLFLLSSVLHSTVKALVSVQKLGEFFASEEIELDQEAKTPTPTDTNNHSNIKSVYMLQL
QASKLVNRKNKAKQDKKSKIPQQDPNLNMSVVNEENICLKIVNGYFTWTQGCPTLTNIDI
KVPFGALTMVVGQVGCGKSSLLLAALGEMQKISGSVTWNKLPDQEEEENNRLFVNHVAGP
KAPEKRAPVAYVSQRPWLLNATVEENILFNMAPNKKRYAEVIEACQLQPDIDTLPQGDQT
VIGERVSLSLSQGIILSGGQRQRISVARAFYQQTKVVFLDDPFSALDIHLSDHLMLEGIL
KFLRQEKRTVVLVTHKLQYLPHADWIIAMKDGTVQTQGTLKDIQCAEPELFEHWKTLMNQ
QDKENTVELKRKSFRRMYTRDILATEEDDEDGSLCTDEDSLTAELHQRNTMLWGSLGTYL
RAAGFLLLPLLILSQLTKHSLMLAIDYWLAHWTSQAIAARTNCTSSAQDCVPSQSLYLQV
FCVLCFLGIVLCLITSVASEWAGLRAAQELHCSLLRVIILAPMRLFETTPLGNILNRFSG
DVNIIDQHIPVAMECLSRSTLLCVSAVGVISYITPVFLIALLPLAIICYFVQKYFRVASR
DLQQLEDSTQIPLLSHYSVTIEGLTTIRAFRHEQRFKKKLLEYTDANNIASLFLTAANRW
LEVRMEYIGAFVVLIAAVASISSALYSKLSAGLVGLGLTYALMVSNYLNWMVRNLADMEV
QLGCVKRISRLLNTEPENYNGEMTPAQVPAGWPKYGEIQIKNLSARYDSSLKPILKHVNA
HIKPGQKVGICGRTGSGKSSFSLALFRMVDTCEGRIIIDGIDIAKLPLQTLRSKFSIILQ
DPILFSGTIRFNLDPERKATDRMLWEALDIAQLTPVVEALPGGLDAMVTEGGENFSQGQR
QLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADWTVVNIAHRVHTILGSD
VVIVMKGGAILEYDRPDVLLEQKDSVFYSFVRADK
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacggatacagagcgactccaatctccaacagcaccctgtccttctgtgggact
gataactcatctgcctacaaggtggataatggacttctgaataacggctgtttcctggat
gctcttgggcttgtaccacacgtcttccttctcttcagcactttccccatcctcttcatc
ggttggggcagccaaagctctaaggttcacatccatcacagcacatggctgcatttccca
ggccataacctgcgctggttgctcacagccgctttgttgtttgtgctggtgtgtgaggtc
gctgaggggattgtctccgatgggtttaaccagtcacgccacctccatctttatatgcct
gctggattgggcattctggcagctataacctccatagtgtactaccacaacatagaaact
tccaactttcctaaacttctgttagctctgctcatctactggattttggcctttgtcacc
aaaaccatcaagttcaccaagtacaatgaacacagaatcagcctggggcaactgcgcttc
tgcatcacgggcttgctggctttaatctacggcctgctgctgacggtggagatcaacgtt
atactacgcaggcgctacatattcttcccacacccgactgaggtgaaacctccagaggac
ctgcaggaccttggtgtccgtttccttcagccttttgtcaacctactgtccaagagcaca
tactggtggatgaacacattcatcacatcggcccacaaacagcccatccacctgaaaacc
atcggcaagctgcccatagctatgagagcactcaccaactatcagaagctacgtaaggcc
ttcaatacacaaaaggagcgaggcatgatccctgcacgaggcccacggtcaatttggtac
gctctgaggcaggcatttggaggccctctactccttagcatcacttaccgcttcctggct
gacctgcttggcttcaccgggccactctgcatctctggcatcgtccaccacatcagccgt
gataatcacaccatcaagtcaccggtgaagctgctaggcatccatttcatttcctcacag
gcatttttagcgaatgcctacgtgttggcggtgctgcttttcctagctctgctccttcaa
aggacattcctacaggcttcctactatgccgccatagaaaccggcattaaaatcagagga
gccatccagtgcaagatctacaataagatcatgtgcctgagtacctccaacatgtccatg
ggcgacatgaccatctctcagatctgcaatctggtggccagagacacagagcagctcatg
tggttcttctttctgtgtcccaacctgtgtgccatgccagtgcagatcactattggtgtg
atcctgctgtactacttattgggaatcagtgccctgattggagctgcagtgatcgccatt
ctcgccccgatgcactactttgtggccacacagctttcccgaacacagaaaagcacactg
gagtactccagtgagagattgaagaagactaatgagatgttgaggggtattaagctgtta
aaattatatgcctgggagcacatatttagatccagtgtggaggagacaagaaaaaaagag
ctgactagcctccgagccttcgccctctacacgtcactctccattttcattaatgcagcc
attccaatcgcagcagttcttacaacgtttgtagtacatgcctacgtacacagctctaca
gacacttctctctctcctgctgtggcctttgcttctctctcactcttccacatcttggtc
acacccctcttccttctttctagtgtactacactcaactgttaaggcgcttgtaagtgtg
cagaaacttggcgaattttttgctagtgaagagattgaacttgatcaagaagcaaaaact
cccacaccaactgatacaaacaaccacagtaacataaaatcagtgtacatgttgcaactc
caggcctcaaagctggttaaccggaagaacaaagccaaacaggacaagaagagtaagata
ccacagcaggatccaaacctgaacatgtctgttgtaaacgaggagaatatctgtctcaag
atcgtgaatggctacttcacctggactcagggatgtccgactctgaccaacattgacata
aaggttccttttggtgcattgactatggttgtagggcaggtaggatgtggaaaatcctcc
ctactgttagctgctctgggggaaatgcagaaaatctcaggaagcgtcacatggaacaaa
ttaccagatcaggaagaggaagagaataacaggttgtttgttaatcacgttgctggccca
aaagcaccagagaagagagctccagtggcctacgtttctcagagaccatggctcctcaat
gccacagtggaggagaacatcttattcaacatggcccctaacaagaaaaggtacgcagaa
gtgattgaggcatgccagctccaacctgatatcgacacacttccccaaggagaccaaacc
gtgattggagagagggtttctctgtctctttctcagggcattattctgtctggcgggcag
cggcagcgtatcagtgtagccagagctttttatcagcaaactaaagtggtgttcctggat
gacccattctccgctctggacatccacctgagtgaccatctgatgctggaaggaattctg
aagttcctcagacaggagaaaaggacagtggtgctggtcacacacaaactgcaatactta
ccacatgcagactggatcatagccatgaaagatgggacagtccagacacaaggcacatta
aaggacatccagtgtgccgagcctgaactgtttgaacactggaaaaccctgatgaaccaa
caagacaaggagaacactgttgagctaaagaggaagagtttcaggaggatgtacaccaga
gacatacttgccacagaggaagacgatgaagatggttccctgtgtacagatgaggacagc
ctgacagccgagctgcatcagagaaacactatgctatggggctcactggggacatacctg
cgagcagctggcttccttttgcttccactgcttatcctgtcgcagctcaccaaacactcg
ctcatgctggcaatagactactggctcgcccactggacatctcaggctatcgcagctcgt
actaactgcacatcatctgcacaggactgtgtgccgagtcagtctctgtacctgcaggtg
ttttgtgtcttgtgttttctgggtatcgtgttatgtttgatcacctctgtggccagcgag
tgggcaggactccgggccgctcaggaactccactgcagtcttctccgtgtcatcatcctc
gctccgatgagattgtttgagacaactcctcttgggaatattctgaaccgattctctggt
gatgtcaacatcattgatcagcacatcccggttgccatggaatgtttgagccgctccact
ctgctgtgtgtctcagcggtgggtgtcatatcctacattaccccagtcttcctcatcgct
ctgctccctctggccatcatctgctactttgtccagaagtatttccgggtggcatccaga
gatctgcagcagttagaggacagcacccagatccccttgctgtcccactactccgtaact
atagagggtctgaccaccatcagagcctttagacatgaacaaagatttaagaagaaactt
ttggaatacacagatgccaataacatcgcctcgctctttctcacagcagccaatcgctgg
ctcgaagtccgcatggagtacatcggggcatttgtggtgctgatagcagctgtggcgtcc
atcagcagtgccctgtacagtaaactctcagctggattagtgggtctgggcctcacatat
gctctcatggtgtcgaactatctgaactggatggtgcgcaatctggctgatatggaggtc
caactcggctgtgtgaagaggatcagccgtctgctcaacacagagcctgagaactacaat
ggagaaatgactccagctcaggttccagcaggctggcccaagtatggcgagatccaaatc
aagaacctgagcgcaagatatgatagcagcctaaaacccatcctaaagcatgtcaatgct
catatcaaacctggacaaaaggtggggatatgtggccgaacaggaagtgggaagtcttcc
ttttcgttggctcttttccgaatggtagacacatgcgagggtcgaattattattgatggg
attgatattgctaaattgccccttcagaccctgcgctccaaattttccatcattcttcag
gaccccattttattcagtggaacaattcgatttaatctggatccagagagaaaagccact
gaccggatgctgtgggaagctctggatatcgctcagctcacacccgtggtggaagcttta
cctggcggattagatgccatggttacagaaggaggagaaaacttcagccaggggcagcgg
cagctcttctgtctggcccgagcatttgtgaggaagagcagcatcctgatcatggatgaa
gccacagcgtctatagacatggccactgaaaacattctacaaaaagtcgttatgactgct
tttgcagattggactgtcgtaaacattgctcatcgtgtgcacaccatcctgggctcagac
gtagtcatcgtgatgaagggtggagccattctggaatacgacagacctgatgtcctgctg
gaacagaaagacagtgtcttctactctttcgtcagagcagacaagtga
DBGET
integrated database retrieval system
