Neoarius graeffei (lesser salmon catfish): 132887778
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Entry
132887778 CDS
T10798
Symbol
six5
Name
(RefSeq) homeobox protein SIX5
KO
K19474
homeobox protein SIX5
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132887778 (six5)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
132887778 (six5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
RNase_J_b_CASP
Motif
Other DBs
NCBI-GeneID:
132887778
NCBI-ProteinID:
XP_060779380
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Position
6:complement(19425735..19456082)
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AA seq
957 aa
AA seq
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MASLSLESPEQTENGSAEESGQTEARVKEETDSEEVSERLLETFPKSALGFSSEQVACVC
EALLQAGNVDRLWSFLATIPPSSDVLRGNETLLKAQALVAFHREDFTELYAILESRDFHP
SNHGFLQDLYLRARYKEAERSRGRSLGAVDKYRLRKKFPLPKTIWDGEETVYCFKEKSRN
ALKECYKVNRYPTPDEKKNLAKLTGLSLTQVSNWFKNRRQRDRTPSGTNSKSESDGNHST
EDEASKADLEDITDRPAAQEAGGSTASLISLSGAPCSTGGQLILNNTSGFLTSPHPLLLN
GSPLLSGTGTGVIINGLALSDGHTVTLSPVTTNTPLLLNGAQVISKGSGSNSVSDENCIT
KMETQASLTSSVPVSLPEDAKVTNDIVSPLDFITVPEPVKAQNGNQMVPPTSISTSTISS
TVMTHTSLPSLALTQNGILSSAVPPSGVVISNPAMPLQSTQQPELVVVATAGSQISPTSS
VSQMASSTVSSSQVLSLPQVVPSIQGIPVSQLVQHPAGTPVSCPQLVPVSPITTQLSQSS
APQFPTPNLQIGPRHTQPQNGSSALGENTVVSVSQVPNGQAPQGMTVQLTDQSSSATTPQ
IQTPLGTQGIPISSPTQVVPVSQSKDTGQSQLVPLPQLMPVSPIAGAPTGTISFPQVVPA
APSFSIPTPGGAFQILTSGSGGGVAVPQGAIRISPIGPPQSVPSAGAIPGVQLLNSGVIQ
LSSASPGNFLLAGGSPFLSVQNGKLILTIPAGFQFTSMPVKSIPENPGPSASSSSGLEQT
STGTSLQNQPVSLSSAQTSTPFHSSPLIGSSALYCNPEPGALANPTPGASPNTSDPPTPT
PTSVLPSQQTLSPESMLSFSPLSSGVASGPHLIQPAWSPMPLSSSSGLTLFDVRGKGDLP
EDPALLGLPGGESLLLGTPPPSDDIHRESHLDDVEMDGDSKILTQLQSVPVDDDLGL
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttgtctttggaatctcctgaacaaacggagaatggaagcgctgaggagtcc
gggcaaacagaagcccgagtcaaagaggaaacggactcggaggaagtttctgagcggctc
ttggagaccttccccaagtccgcgctcggcttttccagtgagcaggtcgcctgcgtgtgt
gaggctctgctgcaggcgggcaacgtggatcgcctgtggagcttcctggccaccatccct
ccttcgtccgacgtgctacgtggcaacgagaccctgctgaaggcccaggccctggtcgct
ttccaccgcgaggactttacagagctgtacgccatcttagagagccgcgacttccacccg
agcaaccacgggttcctgcaggacctgtacctgagagcgcgctacaaggaggcggagagg
tcgcggggtcgcagcctgggggccgtggacaagtaccggctgcgcaaaaagttccccctt
ccaaagaccatctgggacggagaagagacggtatactgtttcaaggaaaagtcgcgcaac
gccctcaaagagtgttacaaagtgaaccggtacccgactccggacgagaagaaaaatctg
gccaaacttactggactttctttaacccaagtaagcaactggttcaagaatcggcgacag
agagaccgaactccatccggtaccaacagtaaaagtgaatctgatggaaaccacagcaca
gaggatgaagctagtaaagctgatttggaggacattactgacagacctgctgctcaagag
gctggaggctcaactgcttctctcatatccctttctggtgccccctgtagtactggaggg
cagctcattctgaataacacaagtggattccttactagtcctcatcccctgttgctcaat
ggaagcccattactatcagggactggaactggtgttatcattaatggactggctctgagc
gatggccacacagtcaccctcagtcctgtaactactaacacgccacttttactcaatggg
gctcaggttatatctaagggtagtgggagcaacagtgtttcagatgaaaactgcattacc
aaaatggaaacgcaagccagcctcactagctcagtccctgtctcattgccggaggacgca
aaagtgaccaacgatattgtctctccattggacttcattactgttccagagcctgtgaag
gctcaaaatggcaaccaaatggttcctcccacctccatatccacatccacaatctcttcc
acagtgatgactcacacctcccttccttcattagcattgactcaaaatggcatcctttct
tctgcggttcccccatctggtgtggttatttccaacccagcgatgccactacaatccacc
cagcaacctgagcttgtggtggtagcaacagctggttcccaaataagccctacttcttct
gtttcacaaatggcatcttccactgtctctagctctcaggttctttctttgccccaggtg
gtaccatccatccaaggtattccagtatctcagttagtacagcatccagcagggactcca
gtgtcttgccctcagttggttccagtgtctcccattaccactcaattatcccagagttct
gcccctcagtttcccactcccaatctgcaaattgggcctaggcatactcaacctcagaat
ggatcctctgcacttggggagaacactgttgtgtctgtctcccaggtgcctaatggacag
gctccacaagggatgacagttcagttaacagaccagtccagttcagccaccaccccacag
atacagaccccactggggacacaaggcattcccatctcctcaccaacacaagtagttcct
gtttcacagtccaaggacacggggcagtcccaactggtacctttgcctcaactcatgcct
gtatcccccattgctggagcacctacagggaccatatccttccctcaggtagtcccagca
gcaccctccttctccatccccactccaggaggtgctttccagattttaacatctggctct
ggtggaggagttgctgtgcctcagggggctatacgtataagccccataggacctcctcag
agtgtgccttcagctggtgctattccaggtgtccagcttctcaattcaggagtgattcaa
ctttcctctgcttctccaggtaacttcctcttggcaggtggcagtccattcctgagtgtt
cagaatggtaaactcatcctcaccatcccagctggtttccagtttaccagtatgcctgtt
aaatccatcccagaaaatccaggcccaagtgctagcagcagtagtggactggaacaaact
tcaacaggaacttcactacaaaatcagccagtctccttatcctctgcccagacctctact
ccctttcattcatctcctttaattggctcatctgcgctttactgtaatcctgagcctgga
gccttggcgaaccctaccccaggagcctctccaaacacttcagaccctccgactccaacc
ccgactagtgtgctgccatcccaacagaccctcagccctgagagcatgctgtcattcagt
cccctcagcagtggtgtagccagtggtcctcatctcattcaacctgcttggagtcccatg
cccttgtcatcttcatctggacttacgctgtttgatgtacgtgggaaaggcgatctacct
gaggacccggctttattgggcttaccgggtggggagtccctgctattgggtaccccccct
ccaagtgatgatatacatagggaatctcatctggacgatgtggagatggatggagactca
aagattcttacacaactgcagtctgtccctgtggatgatgatttgggtttgtaa
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