Neoarius graeffei (lesser salmon catfish): 132887815
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Entry
132887815 CDS
T10798
Symbol
rsf1a
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132887815 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngra03036
]
132887815 (rsf1a)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
132887815 (rsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
WSD
DDT
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
132887815
NCBI-ProteinID:
XP_060779455
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Position
6:complement(24184814..24297416)
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AA seq
1342 aa
AA seq
DB search
MAAPVALAGLPPGLCPSFAVVCSFLERYGAALDLPEMTFPQMEGYLQDTSSVPQPLIELH
VKLLRKLGKSVTSDRWEKYLVKVCQEFNSTWAWELERKGYPEMSMECKADILKYLCESQF
DDNLKFKTAVNEEDPEQMRLQPIGRDKEGLLYWFQLDQDQNVRLYVEEQDDLDGSSWRCI
VRNRNELADILELLKAKMEPAVTDEERHDGTSGSPGNEKSCGGELKVMKKAAKVECASEE
ESKPVTLSTVNINSDKSPKEESQTVCEIKKRGSAEPLKLEQEGKEELKLKVVGTETPKLD
QAPVIDNRVSTIKSLIKDEPRDSPRHWNAISVVMAPGSIKQELPAKTESYKDKKEKTSED
FERAMKSDQQAKIPLKKRELKRSDGYDNSHYSHINNKNNSNGSVSVGGIIVRNPAAMEHA
GEKKIAPPPVLIENSQVQSSESVHERVISQNKKEQYVGFGVIMGPIERKQTFPVPDGSGN
PTKDRNGLHEDQDLKSFKTEVTHTENIRQSVLVRKPSISQPTHLSSMSEEMTLRVEHAES
DAKVKALGADAKERTALLLALPTDGEKECSDGKSVIRSSAEQETVAKLEELGSVEELAGS
RKAKGTMLPDGGTGDMTDRLKTAEENDSKGLKSSRKKRSDKAKLKLQTGEDRNKLEDEEV
SSELQKEGIRLKIKIPLHRRTPELRRSARICKPSPKLAEIQERKHTAPSTAREVEEHMDQ
EEERALHKKDLHKKINSDGLIKSAKGKRRHRRARWSKPSKSRKTEVAVGGDTVCESKSER
DDKSELDSQHSEEAPPEDACKHCSLPNHPELILLCDRCDSGYHTACLRPPLMIIPDGEWF
CPPCQHKYISAGASWLRWLRRHTINLGTRVRFRPEKLLCERLEEQLQNLDTALKKRERAE
RRRERLVYVGISVENIIPNPDADAEDGKQEKKKGTKKCKNLERRSTRKRKSISYRFDDFD
EAIDEAIEEDVQNSDGGDVDLGKDMAAVTEQGEKDVAKEIRQPVKTPAPRKRKRRRRLND
LDSESTLDEEESEDEFQISDSMEEDDFVVSGDDGGSDADAASWDGSERGSISSSIDRLPP
TRRTTRNDHAQGTKRSTRRSARRHRGSTEEEEEMDTEGSSEVSDSDVNLSRRRSRRSQKA
QINYCETSESEGSQKDLERKTNQASRRRRISSSNTSVISKDSEAEEESDSRSRPRGRKRQ
STREDSKQRHKQLKLKPARSTSEEEEESDEEGDAGASDEEKRPLRKSLNRIESDEEEEDV
LEKRQMRKMAGKQASGVTDCREPSVRAHTRGSKDSLLKHNGLLPPRSSAQDEDKDEEDEE
EEDDLMAATDFVNFVFDSEQLS
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggtagctctagcgggtcttcctccaggtttatgtccgagctttgccgtc
gtttgctcgtttttagagcgatacggtgctgctctggatctgcctgaaatgactttcccg
cagatggagggatacttgcaggatacatcatcagttccgcagcctcttattgagctccat
gtgaagttacttcgcaaacttggaaagtctgtgacgtcagacagatgggagaagtatctt
gttaaggtatgtcaggagttcaacagtacctgggcgtgggagctggagaggaaaggatac
ccagaaatgtcaatggagtgcaaggctgatatccttaagtacttgtgtgaaagccagttt
gatgacaacctcaagtttaagacggcagtgaacgaggaagacccggagcagatgcgcctg
cagccaattggcagagataaggaagggctcctctactggttccaactggatcaagaccaa
aatgtgcggctctatgtggaggagcaggatgatctggatgggtcatcatggaggtgtatt
gtcaggaataggaatgagttagcagacattttggagcttcttaaagctaagatggaacca
gcagtgacggatgaggagcgacacgacggtacttctggcagcccaggaaacgagaaaagc
tgtggaggtgaacttaaagtcatgaagaaggctgctaaggttgagtgtgcatcagaagaa
gaaagcaagcccgtcaccttgagcactgtaaatataaattctgacaaatctcccaaagaa
gaaagtcagacagtctgtgaaattaaaaaaagaggatctgctgagccacttaagcttgaa
caagagggaaaggaagagcttaaactgaaagtggttggcactgaaacacctaaattggac
caggctcctgttatagacaacagagtgagcacaattaagagcctcatcaaggacgagccg
agggattcacctcgacactggaatgccatctcggtcgtcatggcacctggctccatcaaa
caggagcttccagcaaagacggaatcctataaggacaagaaagagaaaacgtcagaagat
tttgagagggccatgaaaagtgaccagcaggctaagataccattgaaaaagagggagctg
aaaagaagtgatggctatgacaacagtcattacagccacataaacaataaaaacaacagc
aatggcagtgtttctgtaggtggcataattgtacgtaacccagcagcaatggagcacgct
ggagaaaagaaaatagcaccacctccagttcttatagaaaactcacaagtacaaagtagc
gaatctgtccatgaaagggtcatatctcagaataagaaagaacagtatgtaggatttggt
gtgattatgggcccaattgagagaaagcaaacatttcctgtaccagatggctcaggaaat
cccacaaaggatagaaatgggctgcatgaagatcaggatttgaagagctttaagactgag
gtgacgcatactgagaacataaggcagtcggttctagttagaaagccaagtatctcccag
cccactcatttatcgagcatgagtgaagagatgacgcttcgagttgaacatgctgagagt
gatgccaaagtaaaggctcttggagcagatgcgaaggagcgaactgcgttattattagct
ttaccaacagatggtgaaaaggaatgtagtgatgggaagtcggttattaggtctagtgct
gagcaggaaacagtagcgaagctggaagagctgggtagtgtagaagagcttgctggaagc
aggaaggctaaagggacaatgctccctgatggaggaacaggtgatatgacagaccgtctt
aaaacagcagaagaaaatgacagcaaaggattgaaaagttccagaaaaaagcgctctgat
aaagccaagctcaagttgcaaactggggaggatcggaataaacttgaagatgaggaagtg
tcctctgagcttcagaaggaaggaattcgtctgaagatcaagatcccactgcacagacga
actcccgagctccgcaggtcagccagaatctgcaagcccagtcccaagctggcagagatt
caggagcggaaacacacagcgccttctacagcacgggaggtggaagagcacatggatcag
gaagaggagagagcgcttcacaagaaggaccttcacaagaaaatcaactcggatggacta
atcaaatctgctaaggggaaacgacgacacagacgagctcgctggtcgaaaccttcgaaa
agtcgcaaaactgaagtcgctgtaggaggagacacagtatgcgagagcaaatctgagaga
gatgataagagcgagttggattcacagcactcggaggaagcgccacctgaagatgcctgt
aaacactgcagcctccctaaccaccctgaactgattctcctctgtgaccggtgtgacagt
ggctaccacacggcctgtctgcgacctcctctgatgatcattcccgatggagaatggttc
tgccctccgtgtcagcataaatacatttctgcaggggcgtcgtggctcaggtggctaagg
cgccataccataaatctggggacccgggttcgattccgacccgagaagctgctgtgtgag
aggctggaggaacagttgcagaacctggacacagctctgaagaaacgggaaagagctgag
aggaggcgtgagcgcctggtctatgtaggaatcagtgtggagaacatcatacccaatcca
gatgctgatgcagaggatggaaaacaagagaagaaaaaaggcacaaagaagtgtaagaac
ctggagaggagatcaacacgaaagagaaaatccattagttacaggtttgatgactttgat
gaagcgatcgatgaagccatagaggaagatgtacagaattcagatggaggagatgtggat
cttggtaaggatatggctgctgtcacagagcagggagagaaggacgtagccaaggagatc
cgacagcctgtgaaaactcctgctccgcgcaagaggaaacgccgccggagactgaacgat
ttagacagcgaaagtacactggatgaggaggagagtgaggatgagtttcagatcagtgac
agtatggaggaggatgattttgtggtgtcgggggatgatggaggcagcgatgctgatgct
gcatcctgggatgggagtgagagaggcagcatctccagcagcatagaccgtctgcctcca
acgagaagaacaaccaggaatgaccatgcacaggggaccaaaaggagcacacgcagatcg
gcacgacgccaccgaggctctacagaggaggaggaagagatggacacagagggctccagt
gaggtcagtgacagcgatgtgaatctgagcagaaggaggtcacggcgcagtcagaaagcc
cagatcaactattgcgagacgtccgagtctgaggggtcacagaaagacttggaacggaaa
actaaccaagcatcacgtcgccgccgaatctccagctctaacacatccgttatttctaag
gattccgaggctgaggaggagtctgactcgaggagcagaccccgaggcagaaagagacag
tccacaagggaagactcgaaacagaggcacaaacagctcaaactaaaaccagcaagaagt
acaagtgaggaagaggaggaatcagacgaggaaggagatgctggtgcatccgatgaagaa
aaaaggccgctccgtaaaagcctgaaccgtatcgaatcggatgaggaagaagaggatgtg
ttagagaaaagacagatgagaaagatggccgggaagcaggccagcggagttacagactgc
agggagccgagtgtgagggcacacactagaggctcgaaggactcgctgctgaagcacaac
ggcttgcttcctccaagatcttcagctcaggatgaagacaaggatgaggaagatgaggaa
gaggaagacgacctcatggccgctacggactttgtgaactttgtttttgacagcgaacag
ttatcgtga
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