Neoarius graeffei (lesser salmon catfish): 132887836
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Entry
132887836 CDS
T10798
Symbol
snrpd2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132887836 (snrpd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngra03041
]
132887836 (snrpd2)
03032 DNA replication proteins [BR:
ngra03032
]
132887836 (snrpd2)
Spliceosome [BR:
ngra03041
]
Complex A
U1 snRNP components
Sm proteins
132887836 (snrpd2)
U2 snRNP components
132887836 (snrpd2)
Complex B
U1 snRNP components
132887836 (snrpd2)
U4/U6.U5 tri-snRNP components
132887836 (snrpd2)
Complex C
U2 snRNP components
132887836 (snrpd2)
DNA replication proteins [BR:
ngra03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
132887836 (snrpd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Motif
Other DBs
NCBI-GeneID:
132887836
NCBI-ProteinID:
XP_060779531
LinkDB
All DBs
Position
6:complement(29438258..29445793)
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AA seq
118 aa
AA seq
DB search
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLITGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttttgaacaagccaaagtcggagatgactcctgaggagctgcagaaacgtgag
gaggaggagtttaacaccgggccgctgtctgtcctcacgcagtctgtcaagaacaacaca
caggtgcttatcaactgccgcaacaacaagaagctgctgggtcgagtcaaagcctttgac
agacactgtaacatggtcctggagaatgtaaaagagatgtggactgaggtgcccaagagt
gggaaggggaagaagaagtccaaaccagtgaataaagaccgttacatctccaagatgttt
ctgagaggagactctgtcatcgtggtactgaggaatccactgatcactggcaaataa
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