Entry |
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Symbol |
trip12
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Name |
(RefSeq) E3 ubiquitin-protein ligase TRIP12
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KO |
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Organism |
ngra Neoarius graeffei (lesser salmon catfish)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:ngra00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132887839 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:ngra04121]
132887839 (trip12)
Enzymes [BR:ngra01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132887839 (trip12)
Ubiquitin system [BR:ngra04121]
Ubiquitin ligases (E3)
HECT type E3
132887839 (trip12)
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
6:29987518..30155380
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AA seq |
2067 aa
MSIRINHTAGGSLRRSQRNTLATRLQSEQSKQKTHSPPESRRSYTKASKAPPTPAAGSSC
GHAPRRNSLALSSLSHSVSDPDSEAAGSSDQHEVSNSRALKRSSAPDHNTTFSPSPAKRP
KAPPFESSEQSEPADPTADSAPDLPPTARSKKRRLASEHPTSRTLNRKSGTCPATSSSHK
RKKADTPFCSSSSSSFSSSSSFLSGSSSEQAGRSSKPSKLASKSAASAKSVTDSASSSSA
SSSSFTSSSSSSSSVVVAGASGCAPPSQGARLKQGKDQSKSRRSRSASSPSPRRSSRDKE
HSKSSTAASKFDWTSRFSPRVNLPKPRLALPGSSKPETPSGSSKPGPSGLQAKLASLRKS
SKKRSESPPAELPSFRRTRQNTTGSCASTSRRGSGLGKRGAAETRRQDKMAENDNNQDGA
NSSRTEETPQGASASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPRMSQ
LFHRTIGTGASSKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPA
LITLLQMEHNFDIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALT
ALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSL
PLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVVTPPVLS
SGMFIMVVRMFSLMCSNCPNLAVQLMKQNIAETLRFLLCGASNGSCQEQIDLVPRSPQEL
YELTSLICELMPCLPREGIFAVDAMLKKGSAHTTEAAVWQWRDDRGLWHPYNRIDSRIIE
TAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLINPNTGHVEVRGED
ARAELMREEAELARCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFSDSELLKDVL
RNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLAESES
FLPSPPKACTSGITAATTTITTATPPAASSVTSDLGSPSFHNNMEDSLDLSPQGRLSDVL
KRKRLPRRVPRRPKYSPPRDDDKVDNQAKSPTTTASPKSSFLASLNPKTWGKLGAQNNST
NSEPSRTAGVSGLARTANKDSVSNNRDKIKAWIKEQASKFVERYFNSENVDGSNPALNVL
QRLCTATEQLSLQVDGGVECLVEICSIVSESDVSSFEIQHSGLVKQLLLYLTSNSERDVV
SRDERIKRFLHIFYGSPVPGQEPLFRLEPTENGPLLALVHKMNSCLSQMEQFPVKVHDFP
SGNGNGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVR
GYGRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIADHLLPYNMTVYQAVRQ
FSLQPEEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGCKDSVGGKRGRAQTAPTK
TSPRNAKKQDELWHDGVCPSVSNPLESYLISEPPEGITFDDPSLEVILLLRVLHSISRYW
FYLYDNAVCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPPWLTELGKTCPFFFPFD
TRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLKQAESV
MQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQE
GTKYMFSSRGLFAVPFGRSTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKW
MLRNESSISSHDLVNIDPGVAKSIQHLEDIIRQKRRLEQDKSYTRETLQQALESLNMNGC
SVEDLGLDFTLPGFPNIELKKGGKDVPVTIHNLEEYLRLVVYWTLNEGVSRQFESFREGF
ESVFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFEVLSS
FDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKL
PDYSSIEIMREKLLMAAREGQQSFHLS |
NT seq |
6204 nt +upstreamnt +downstreamnt
atgtccatcaggattaatcacactgcaggggggtcactgcgccgatcacagaggaacaca
ctcgccaccaggttgcagtcagaacaaagcaaacaaaaaacacattcccctcctgaaagc
agaagatcatatactaaagcttccaaagccccgcccacacctgcagctggctcctcgtgt
ggccacgcccctcgaagaaacagtcttgctctctcttcattaagtcactctgtgtctgac
ccggattcagaggcagcaggaagctcagaccaacacgaagtcagcaacagtcgtgccctc
aaacgtagctctgcacctgatcacaacaccaccttctcacccagcccggccaagcggccc
aaagctccgccctttgagagctctgagcagtctgaacctgctgacccgactgctgactcc
gcccctgacctcccgcccacagccaggtctaaaaagcgacgtttggcatctgaacatcct
actagcaggacactaaacaggaagagtgggacgtgccctgccaccagctcctctcacaaa
cgcaaaaaggcagacaccccattttgttcctcttcttcctcctcattctcttcctcctct
tcttttttatccggctcgagcagcgagcaggccggccgctcatccaaaccctccaaactg
gcgtccaaatcggctgcctcggccaaatccgtgaccgactctgcctcttcctcttctgct
tcttcttcctcctttacttcctcttcatcctcctcttcatccgtagtggttgcaggtgcc
agcggctgtgccccgccctcacagggcgcccggctcaagcagggtaaagatcagagcaag
tcgcggcgctctcgctctgcctcttcgccttctcctcgccgcagcagtcgtgataaagag
cacagcaaatccagcacagctgcctctaaattcgattggacgagccgcttcagtcccaga
gtgaacttgccgaagcccagactcgccctgcctggatcctccaaacccgaaactccatca
gggtccagcaaacccggcccgagcggactgcaggccaaacttgccagtctgagaaagtcc
agtaagaagcgtagtgagtctccccctgcagaactcccaagctttaggaggacacgacaa
aacaccacgggctcctgcgccagcaccagtcggcgaggttcaggtttagggaagcgtggt
gcagctgaaactcgccgacaggacaaaatggccgaaaacgacaacaatcaggacggagcc
aattcatcacgcacagaagagaccccacagggagcttcagcctccagttcggtagctggt
gctgtcgggatgaccacatccggagagagcgaatcagatgactcagaaatgggccgatta
caagctctcctggaggcacgtggtctgccccctcacctttttggacctcgtatgtcccaa
ctgttccatcgtaccatcggcactggagcaagttcgaaggctcagcagttgctgcagggt
ctgcaggcgacgggggacgagtctcagcagctgcaggcagcgatagaaatgtgccagctg
ttagtgatggggaacgaggagacgctgggaggatttcctgtgaagagcgttgtacctgct
ttgatcacattgttacaaatggagcataacttcgatattatgaatcatgcatctcgtgct
ctaacgtacatgatggaggctctgccacgctcttctgctgtagttgtagacgccattcct
gtcttcctagaaaagcttcaggtgatccagtttatcgatgtggccgagcaggctctcact
gcgctggagatgctctcgcggagacacagcaaggccatcctgcaagccggtgggttggcc
gactgtttgctgtatctggagtttttcagtattaacgctcagaggaatgcattagccatt
gctgctaactgctgccagagcatcacacctgatgagtttcactttgtagccgactcactg
cctctactcactcagagactcacacaccaggacaaaaagtcagttgagagcacgtgtctt
tgctttgcccggctggtagacaactttcagcatgaagagaatttgttgcagcaggtggca
tcacgcgatctgctaacaaacatccagcagcttctggtggtaacgccaccggtgctgagt
tcaggcatgttcatcatggtggtgcgcatgttctcactcatgtgttccaactgccccaac
ctcgctgtgcagctgatgaagcaaaacattgcagagacgctgcgtttcctgctttgtgga
gcatcaaatggaagctgtcaggagcaaatcgacctcgttcccagaagtccccaggaactc
tatgagctcacttcccttatctgtgagctgatgccatgcctgcctagagaaggcattttt
gctgtcgatgccatgttgaaaaagggtagtgcgcacactacagaggctgcagtgtggcag
tggagggatgaccgaggcctgtggcatccatacaaccgtatagacagtcgcatcattgag
acggcccatcagaacggtgaggacgagatcagcctctcaacgcttggccgagtttacacc
attgacttcaactctatgcagcagatcaatgaggacacgggaacggcacggggaattcag
aggaaacccaaccccctgatcaaccccaacactggtcacgtggaggtgcgtggtgaggat
gcgcgtgcagagctgatgcgggaggaggcagagctagcacgctgctttattaagactctg
ttcggtgtgctatatgaggtgtacagctcctcagccggtcccgccgtcagacacaagtgc
ctcagagccatcctgcgcatcatctacttctctgactccgagctgctcaaggatgtgctg
cgcaaccacgccgtctccagtcacatagcctcgatgctatccagtcaggacctgaagatt
gtggtcggctctctgcagatggcggagatcctcatgcagaagctacctgacgtgttcagt
gtgtacttcaggagagaaggtgtgatgcaccaggtgaagaacctggctgagagtgagtcg
ttcctccccagtccgcccaaggcgtgcacgagcggcatcactgcagcaaccaccacaatc
accacggcaaccccacctgccgcctccagcgtcacatcagatttgggttcgccaagtttc
cataacaacatggaggactcgctggacctcagcccacagggtcgtttgagtgatgttctg
aagaggaagcgtcttcctcgcagagtgccacggcgtcccaagtattctccacccagggat
gatgacaaagtggacaatcaggctaagagtcccaccaccactgcgtctcccaaatcatcc
ttcctggcgagtcttaaccccaaaacttggggaaaacttggtgctcagaacaatagcact
aactctgagccatctcgcacagccggggtcagtggcctggcacgcacagctaacaaagac
tcggtttctaataaccgggacaaaattaaagcatggataaaggagcaggccagtaagttt
gtagagcgatacttcaattcggagaatgtggacggcagcaacccagcactgaacgttttg
cagagattgtgtactgctacagagcagctgagcctgcaggtggatggcggtgtggagtgt
ttagtggagatctgcagcatcgtttcagaatcggatgtttcgtcatttgagattcagcac
agtggcctggtgaaacagctgctgctctatttaacctccaacagtgagagagacgtcgtc
agcagggacgagaggatcaaaagattcttgcacattttctacggcagtcctgttccaggg
caggagccactgttccggctggagccaacagagaatgggccactgctggcactcgtgcac
aaaatgaacagctgtctgagtcagatggagcagtttcctgttaaagtgcatgactttccc
agtggtaatggcaacggcagcagaggttctcaagcactgaaattcttcaacacacatcag
ctgaagtgccagctgcagagacacccagactgcacaaacgtgaagcagtggaagggggga
cctgttaaaattgaccctcttgcactagtacaggccattgaaagataccttgttgttaga
ggatatggccgaatcagagaggaggatgaagacagcgatgatgacggatcagacgatgaa
attgatgagtcacttgcagctcagttcctgaactcgggcagcgtgcgccaccggctgcag
ttctacattgctgatcacctgctgccgtacaacatgactgtgtaccaggcggtgcgtcag
ttcagcctgcagccagaggaggagcgcgagagcactgacgatgaggccaaccctctcggt
cgcgccgggatctggaccaaaacacacacaatatggtataagccagtcagagaggacgag
gatggctgtaaagactctgtaggagggaagaggggtcgagcacaaacggctcccactaaa
acctcaccacgtaacgctaagaaacaggatgagctgtggcacgatggtgtgtgtccgagt
gtcagtaacccattggagtcgtacctcatatctgaacccccagagggcattacgttcgat
gacccctccctggaggtcattctgctattgagggttcttcactccatcagcagatactgg
ttctacctctacgataatgctgtgtgtaaggagatcattcccactagtgagttcatcaac
agtaaacttacagcaaaagcaaacagacagctgcaggatccgcttgtgatcatgactgga
aacatcccaccctggctcactgagctgggcaagacctgtccgttctttttcccatttgac
acgaggcagatgttgttctatgtcactgcatttgatcgtgaccgcgccatgcagcgtcta
cttgacaccaaccctgaaatcaaccagtcagattcacaggacagccgcgtagcaccccgc
cttgacaggaagaagcggacgataaacagagatgagttgttaaagcaggcagagtctgtg
atgcaggatctgggcagttccagagccatgctggagattcagtatgagaacgaggtgggg
acaggtcttggtccaaccctggagttctacgctcttgtgtctcaggagcttcagagagct
gatctgggtttatggcgaggagaggaggtcacccttgccaacccaaaagggagtcaggag
ggcaccaagtacatgttcagctctaggggcctctttgctgtaccttttggtcgtagcacc
aagccagctcacattgccaagatcaagatgaaattccgctttttaggaaaactcatggct
aaagccatcatggacttcagactgctggatctgcccctgggcctgcccttttacaagtgg
atgttgagaaatgagtcgtcaatcagctcccacgatttggtcaacatcgaccctggcgtg
gccaaatccatccagcacctggaggacatcattaggcagaagaggagactagagcaggac
aaatcctatacaagagagacactacagcaggctctggaaagtttaaatatgaatggctgt
tcagtggaggatttagggctggacttcacactgccaggattcccaaacattgagctgaag
aagggaggcaaagatgtcccggtcacaatccacaacctggaggagtacctcaggttggtg
gtgtactggaccttaaatgagggtgtgtcccgacagttcgagtcttttagggaagggttc
gagtcagttttccccctccaccacctacagtacttctacccagaagagctggaccagtta
ttgtgtggcagcaaatcagagacgtgggatgtcaaaactctgatggaatgctgcagaccg
gaccacgggtatacacatgacagccgggcggtgcgattcctctttgaggtgctgagtagt
tttgatgcagagcagcagagactcttcctgcagtttgtgactgggagcccgagactgccg
gtaggaggtttccggagtttaaatcctcctctgacaattgtgcgcaagacatttgaatca
acggagaacccagacgactttttgccatcggtgatgacgtgtgtaaactacctgaagctt
ccggattattccagcattgagatcatgagggaaaaactgttaatggcggcacgggagggc
cagcagtcttttcacctctcctga |