Neoarius graeffei (lesser salmon catfish): 132887847
Help
Entry
132887847 CDS
T10798
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04517
IgSF CAM signaling
ngra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
132887847
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132887847
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ngra04812
]
132887847
Cytoskeleton proteins [BR:
ngra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
132887847
Intermediate filaments
Intermediate filament-binding proteins
132887847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH
PH_9
CREPT
YdjO
SLATT_6
Motif
Other DBs
NCBI-GeneID:
132887847
NCBI-ProteinID:
XP_060779556
LinkDB
All DBs
Position
6:32430505..32652367
Genome browser
AA seq
2576 aa
AA seq
DB search
MASAATDLDNAEAQRQLNNNNRPSSTGFWESETTSAKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIHNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNIA
EQSLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRIGKVLDNAIEAE
KIIQRYEVLASDLLEWIEKTISIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWEKLEKAEHERGVSLRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERMGAV
MELAVEMESEGYYDIRRIMARKDNILKQWDLLKDLVTARKTRLEKNLALQKTFQEMVYMI
DWMEEMQMKLLSKDFGKHLLEVEDLLQKHTLQEADITVQAERVQTLNAAALKFTNIDGYQ
PCDPQVICNRVNHVSTCLEELKQLAANRRSELEDSRELWVFFQEVEECDCWMREKISILN
TQSCGKDLSSVLKLLQKHKSIAGELLARRALLQQTMKKGKQIITQKRLHTAGINDKLMEV
KEDWKRLEDQAAMRLGHLQEALDFFQFSAEMDDQLAWLQDAYRLVSSDDFGHDEFSTQSL
LKKHVRVREEVDKHRQNVVALRQHAVILPLHYGELEEVKERIQEVERVYSEVAEVAVMRQ
QWLNDALAVYRMFSEVNACELWIDEKEKWLNKMDVPERLEDVEVVAHRFESLDQEMNSLM
GRILDVNLIVQQLLDGDHPSSTEVRGCQDHLNSRWNHMVELVEQKKDHLNSILRIQNYLL
ECSEIKSQIQEKRKAIDATQYSGSDLGSVLALQRRLSTMEGALAVLEPKLIHLQQEAEDL
ATSEPHKAEEILIPFEGVSLEWDELKRTLQGCEDSLTVAGRLQQFIQDLDSFLTWMVQKQ
TEAASNELPESLDEAERLINLHAALNEEIHSYEEDFERLQAVRELLDSDDTLLANAALHQ
WLQKLSAGWNKLLQMWESRRDELVQAHIYHLFMKDVKQAEAFLNNQESSLAHVELPTTVE
TVEAAIKKHKEFSMAMELNLHRIKAVIEAGESLISQNNIYSERIRDRVDLLITRGNQNRD
VAQQWLRKLTDQWELQRFMQDCHELGDWVMEKMLMARDSTCDDTQQLHKKWLKHQTFMAE
LTQNKEWLDKIQKEGERLIAEKPELSSMVQQKLSEIRECWLELENLTQVKALQLFENDRA
QQIAQNYTRLNERVQQLELQLNHCDQGHDLTSVNKQLKKLQMMERQMEEWCNEVCDLQQQ
SSSLPEEYVMTDAVSERQAEVEARIVRLIEPLKERRRILLASKELHQVRRDLQDEILWVQ
ERLPLATSQETGSSLLGVQQLMKKNQSLQRELESHQGHVEEVMERARMFSSVRTTEAECV
SALMEDLHSLWGALWAETECKQVHLDSMYQAQQYYSDIMEVEAWLNEQELHMMNEEKGKD
ESSTLQLLKKQLSLEQTIEDYAETIGLLSQQCRQLLELRHPDSEQISKRQSQIDRLYVSL
KDLVEEHKCRLEQQYWLFQLHREVEELEQWIAEREISASSTELGQDYEHVTILQEKFTDF
ALETGSVGQERVIAINQMVDELIDYGHVDAAIIAEWKDGVNESWAELMELMETRAQMLAA
SHQLHKFFSDCREVIIQIADKHRRLPEVQECQDGTTNTSSLQRLMNTFEQDIQLLVGQMR
QLQENAAQLRTVYAGEKAEAIAMQEYEVMRAWKELIMSCEECRVQITMTSDKLQFLSIVR
DQLIWMDSIICQIGTGEKPRCRTLYLSADVFRDVSSVEVLMNYHQSLKSEVEARNNSIVQ
CIEMGKMLLAERNPAAEEIKEKLEKVMAKQRELTEKWDKHWEDLQHMLEVHQFAQEAVVA
ESWLSSQEAFLVSQELGGSVDEVEQLIRRHEAFRKAAAAWEERFSSLRRLTTVEKMKAEQ
SKLPPTPLLGRKVFLDPQDSSPARSSPSSLHKQTIYEQGDYWGERNMAQPSTPPGSRRLG
STVTNYTPVVSGSAMSRIQEARNTGVLGVAAGLGMSTELKSTQIRPLRDTVRPLIDVNIM
AEVVLQEPGCSGGSRPELQVEQQRPHVKDFRMERQLSNEQLIQARRDELPQEVWRERAER
ERRLERQTSSEQEVYETRRRDRHRLERQESSEHETGREPSDRRSGGGEKRSTLADIVEQL
QEREAAQARGEIPRLPNGFPEKSSRPDRPRARDRPKPRRRPRPKDGAQGETRRSRSAPAQ
SSSSVPQPPSHNAQREGFLFRKLDIESQKKSSNSRSWVNLYCILNKGELGFFKDSKNTTS
TYNNEPHLNLSSCSCDIILGYKKRKNVFTLKTKDGSEFLFHAKDEDDLKGWISSLTMSIS
EHEEIAKWGQSHPTTSSTDEGTRREGSRAEKSDRADRGSERSDKGEKMEKKSGKKK
NT seq
7731 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgccgctacggatttggacaatgctgaagcccagagacaattaaacaacaac
aaccggcccagcagcacaggattttgggaaagcgaaaccactagtgctaaactgtttgaa
tgctcacgcattaaagcactagcagacgaaagggatgcagtgcagaagaaaaccttcact
aagtgggtgaactctcacctggctcgtgtatcctgccgcatcgctgatctgtataatgat
ctgagagatggttacatgctcaccaggctactggaagtgctttctggagaactactgcct
cgacctactagaggaagaatgcgaatccactgtctggagaatgtggacaaagccctgcag
ttcctcaaagagcagagagttcatctggagaacgttggatctcacgatattgttgatggc
aaccatcgtcttacactcggtctcatctggaccattatccttcgcttccagatccaagta
attaaaattgagacagaggacaacagggagacacgctcagctaaagatgctctattactg
tggtgccagatgaaaacggcagggtatcctgaagtaaacattcacaatttcacgacatgt
tggagagatggattggctttcaatgcccttatacatcgacacaggcctgatttgattgaa
tttcacaagctgaccagatcgaatgctacacacaatctgcagcaagccttcaatattgct
gagcagagtctcgggctcactaaacttcttgatccagaggatgtgaacactgaaaatccg
gatgagaagtctattataacatacgttgtgtcctactaccactacttctccaaaatgaaa
gctcttatagtagagggcaaaaggattggaaaggtgctggataatgccatagaagctgag
aagattattcagcgttatgaagttctggcctcagatctgctggagtggattgaaaaaacc
attagcatcattagcaaccagaagtttgctaactctctaacaggagtacaacaacagctg
caggcctttacaacctactgcaccattgagaaacctataaagttccaggagaaagggaac
cttgaggtgctactctttaccatccaaagcaaactcagagccaacaaccagaaaccatat
gtgcctcatgatggaaagctcatttctgacatcaacaaggcatgggaaaagttagaaaag
gcagagcatgaaagaggtgtgtctttaaggaaggagctgattcgtcaggagaaactggaa
ctacttgctcagcggtttgatcacaaaaccaccatgaggcaggcgtggcttaatgagaac
cagcggcttgtttcccaggacaattttggctatgatttgccagcggtggaggcggcaatg
aagaagcatgaggcgatcgaggctgacatctcgtcctatgaggagcgcatgggtgccgtg
atggagctggccgtggagatggaaagtgaaggatattatgacatcagacgcattatggct
aggaaagacaatattctaaaacaatgggatctgctgaaagatcttgtgactgctcgaaaa
acacgactagagaaaaacctagcactgcaaaaaaccttccaggaaatggtctacatgatt
gactggatggaggaaatgcagatgaaactgctctcaaaagactttgggaaacacctgctg
gaggtggaagacctgctgcagaaacacactctgcaggaggcagacatcactgtacaggca
gagcgtgtgcaaacactcaacgctgctgcacttaaattcaccaacattgatggataccag
ccatgcgatcctcaggtcatctgtaatcgtgtaaatcatgtaagcacttgtctggaggaa
ctgaaacagctagcagctaatcgtcgctctgagctagaggattctcgtgagctctgggtt
ttcttccaggaagtagaagagtgtgattgctggatgcgcgagaagatctcaatcctgaac
acacagagctgcggtaaggatctcagcagtgtcctgaagctcctgcagaagcacaagagc
atagctggtgagctgttagctcgacgtgcacttctccagcagactatgaaaaagggaaaa
caaattatcacgcaaaaacggttgcacacagctgggataaatgataagttgatggaagtg
aaggaagattggaaaagactggaggatcaagctgcaatgagacttggccatctgcaggag
gcgctggatttctttcagtttagtgctgaaatggatgatcagctagcatggcttcaagat
gcctacagacttgtctccagtgatgattttggtcatgatgagttttctacacagtcgttg
ctcaagaagcatgttcgtgttcgtgaggaggtggacaagcaccggcaaaatgttgtagca
ctccgtcaacatgcagtaatactgccacttcattatggagagctagaggaagtgaaggag
cggatacaggaagtggagcgtgtgtatagtgaggtggcagaggttgcggtgatgcgccag
cagtggctgaatgatgctcttgctgtctaccgcatgttcagtgaagtgaacgcatgtgag
ttatggattgatgaaaaggaaaaatggctgaacaaaatggatgttcctgagagacttgag
gatgttgaggtggtcgctcacaggtttgagagcctggaccaggagatgaacagtttgatg
ggaaggatcctggatgtgaatctcattgttcagcaactcttggatggtgaccatcctagt
tccactgaagtcagagggtgtcaggatcacttgaacagcaggtggaaccatatggttgaa
ctggttgagcagaagaaggatcatttgaactcaatccttcgcatccagaattatttactt
gagtgcagtgagattaaatcacaaattcaggaaaaacgcaaagccattgatgcgacacaa
tattcgggcagcgatctgggcagtgtcttagcactacaaaggcgtttgtccaccatggag
ggagctcttgccgttctagagcccaaactcatccatttgcagcaggaagcagaagacctt
gcaacctccgagccacacaaagcagaggagattctcattccctttgaaggtgtgagtctg
gagtgggacgaattgaaacgtactcttcagggttgtgaggattcattgactgtagctggc
cggctacagcagttcattcaggatttggattctttcttgacatggatggtgcagaagcag
acggaggcagcatctaatgagttacctgagtctttggatgaggctgagaggctcatcaac
ctccacgcagctctcaatgaagaaattcacagctatgaggaggattttgagcggctgcag
gctgtgagggaactgttggattcagatgacactctactagcgaatgctgcactacaccag
tggctccagaaacttagtgcaggctggaacaagctgctacagatgtgggagagcaggagg
gatgagctagtgcaggcacacatctaccatcttttcatgaaagatgtcaagcaggctgag
gccttcctcaacaaccaggagtcctcattggcacatgtggagctccctacaacagtggag
acagtagaagcagccattaagaaacacaaagagttcagcatggcgatggagctcaatctg
caccggatcaaagctgtgattgaggcaggagagagtcttatcagccagaacaacatctac
tctgagcgcatccgagatcgggtggatttactcattaccagagggaatcagaaccgtgat
gtggcacagcagtggctcagaaaactcacagatcagtgggagctgcagagattcatgcag
gactgccatgagttgggtgactgggtgatggagaagatgctaatggcacgtgactcaacc
tgtgatgacactcagcaactccataagaaatggctgaagcaccaaacgtttatggctgaa
ctcacacagaacaaagagtggcttgacaaaattcagaaggaaggtgagcggctgatcgcg
gagaagccagagcttagctccatggttcagcagaagctcagtgagattcgtgagtgttgg
ctggagctagaaaacttgacgcaggtcaaagcactgcagctgtttgagaacgaccgtgca
cagcagatcgctcaaaattacactcggctgaatgagcgtgtgcagcagctggagctgcag
ctaaatcactgcgaccaaggccacgacctcacctccgtcaataagcagctcaaaaagctc
cagatgatggagcgacaaatggaagagtggtgtaatgaagtgtgtgacttgcaacagcag
tcatcctctcttcccgaggagtatgtgatgacagacgcagtgtctgagcgtcaggctgaa
gtagaggcacggattgtacgtctcatcgagcctctgaaagagagacgaagaatcctgctt
gcttccaaagagttgcaccaagtgcgccgtgacctgcaggatgaaattctgtgggtgcaa
gagcgccttcctctagcgacatcacaggaaactgggagtagtttactgggtgtacagcag
ctcatgaagaaaaatcagagcttgcaaagggagttggagagccatcaggggcatgtggaa
gaggtgatggagcgagcgcgtatgttctcatcggtgcgcacgactgaggcagagtgtgtg
agcgcattaatggaggatctacacagcctatggggtgcactgtgggctgagacagaatgt
aaacaagtacacttagactccatgtatcaggctcaacagtactacagcgacattatggaa
gtggaggcgtggctcaacgaacaggagctgcatatgatgaatgaggagaaaggaaaggat
gaatccagcactcttcagctgctgaaaaaacagttatctttggagcagacaattgaggat
tacgctgaaaccatcggccttttatcacaacagtgcagacagctacttgagctcagacat
cctgacagtgaacagatcagtaaacgccagtctcaaatcgaccgactctacgtgtctttg
aaggacttggtggaagagcataagtgccggttggaacagcagtactggctctttcagctc
cacagagaggtggaagaactggaacagtggattgctgagcgagagatctcagccagctcc
accgaacttggacaggactacgaacatgtcacgatcctgcaggaaaagtttactgacttt
gccttagagaccggaagtgtgggtcaggagcgagtgattgctattaatcaaatggtggat
gagttgattgattatggccatgtggatgctgccatcattgctgagtggaaggatggagtg
aatgaatcatgggctgaactgatggagctgatggaaaccagagcacaaatgcttgctgcg
tcacaccaacttcacaaattcttttccgactgcagagaggtgataatacagatagctgat
aaacaccggagattaccagaagtgcaagagtgccaggatggcacaacaaacactagctca
cttcagagactcatgaacacatttgaacaggacatccagctattggttgggcagatgaga
cagttacaggaaaatgctgctcagctccgtactgtttatgcaggagagaaggcagaggcc
attgccatgcaggaatatgaagtgatgcgagcatggaaggagctgatcatgtcctgtgag
gaatgtcgtgtacagattaccatgacatcagataaactgcaatttttaagcatagtacgt
gatcagttgatatggatggacagcatcatctgtcagataggaacgggagagaaaccaagg
tgcagaacgctttacttatctgctgatgtttttagggatgtctcctctgtcgaggtgctc
atgaactaccatcagagtctgaagagtgaagtggaagcacgaaataacagtattgtgcag
tgtatcgagatgggaaagatgctgctggctgaaagaaacccagcagcagaagagattaaa
gagaaactggagaaagtcatggcgaaacaaagagagctgacagagaaatgggataaacac
tgggaggacctacagcacatgttagaagttcatcagtttgctcaagaggcagtggttgct
gagtcctggctctcatctcaggaggcattcctggtcagtcaggaacttggtggcagtgta
gatgaagtagaacagcttattcgccggcatgaggccttcaggaaagcagctgcagcctgg
gaagagagattcagctcattacgccgcctcactacggtagagaagatgaaggcagagcag
agtaagctgcctccaactcctttgctgggtcgtaaggtttttctggacccacaggattca
tctccagcacgtagcagcccttcatcacttcacaagcagaccatttacgaacagggagac
tattggggtgagcgaaacatggctcagccatctacgccacccggatctcggagacttggc
tcaacagtcacaaactacacaccagttgtgagtggatcagccatgtccagaatccaagag
gcaagaaatactggtgtcctgggggtcgctgcaggtcttggaatgtccacagaacttaaa
agcactcagataagaccactgcgtgacactgtgcgccctctaatagatgtgaatataatg
gcagaggtagtgcttcaggagccgggatgcagtggaggcagtcgccctgaattgcaggtg
gaacagcaacgtcctcatgtgaaggactttcgtatggaacgtcagctttctaacgaacag
ctgattcaagcgaggagagatgaacttccacaggaagtatggcgggaaagggcagagaga
gagaggaggctagagagacagacctccagcgaacaggaagtatatgaaacccggagaaga
gaccgacatcggcttgagagacaagaaagcagcgaacatgagacgggcagagaaccatca
gacagacgatcaggaggaggagagaaacgttctaccttagctgacattgtggaacagctt
caggagagagaagctgcacaggctcgaggagaaattcctcgccttccaaatggatttcca
gagaagtcgtcacggccagaccgaccccgagctcgagaccgaccaaaaccacggagacgg
ccgcggcccaaagatggggcacagggtgaaacgagacgttcacgatctgctcctgcacaa
agcagctcatctgtcccccagccaccttcccataatgctcagcgtgagggcttcctcttc
cgcaagctagacatagagagccagaaaaaaagctctaacagcagatcttgggtgaatctg
tactgcatactgaataaaggcgaacttggtttcttcaaggattcaaagaacacaacatct
acatacaacaatgagccacatctcaatctgagcagctgctcctgcgacatcatccttggc
tataagaagaggaaaaacgtcttcactcttaaaactaaagacgggagcgagttcctgttc
catgctaaagatgaggatgacctgaaaggctggatctcgagtctcaccatgagtattagc
gaacacgaggaaatcgctaaatgggggcagtctcatccaactacctcatctacagacgag
ggcacacggagggaaggcagcagagctgagaaatcagacagggctgatcggggctctgaa
cgctcggacaagggtgagaaaatggagaaaaagagcggaaaaaagaaatga
DBGET
integrated database retrieval system
