Neoarius graeffei (lesser salmon catfish): 132887856
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Entry
132887856 CDS
T10798
Symbol
tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
Enzymes [BR:
ngra01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
132887856 (tsen34)
Transfer RNA biogenesis [BR:
ngra03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
132887856 (tsen34)
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
CTD10
Motif
Other DBs
NCBI-GeneID:
132887856
NCBI-ProteinID:
XP_060779577
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All DBs
Position
6:complement(34562073..34576059)
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AA seq
322 aa
AA seq
DB search
MDWDATELSIQSDEQHAESSECVEARNQTDGEEKAENQTVNISFCGSTPLLWRAADIKKC
REEVGVIGTLVGSLARQPRQNVRLGRPLEILQEEAWLLVETGKAIALRHKELSADEESRL
KAVELYEARLEQSYKEQHVLALEDKKAVLQRVISEKQNAHKGKDAAEQAVRQRLESLEKS
FSFPRSAMAVQLCTARAGFSHCPEEHAFLTVDWPMPRNKRSETRFRVYKDLRRKGFYLTP
AGKFGGDYLVYPDDPLRFHAHFIALCLPMDEKLPLCDVLAIARLGSSVKKTVLLCSPQDT
SDSGEEMGEEVVYSSLQWSGIV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggattgggatgcgacagaactgagcatccagtctgatgaacaacatgcagaaagcagt
gagtgtgtggaggcgagaaatcagactgatggcgaagagaaggctgagaatcagactgtg
aacatcagcttctgcggatccacgcctttgctgtggagggcggcagatattaagaagtgt
agagaagaggtcggggtgatcgggactcttgtggggtctctggccagacagccaaggcag
aatgtcagactgggaaggccactggaaatcctgcaggaagaggcttggctgctggtggag
actggaaaggcgattgctttacggcacaaagagctgtctgcagatgaagaaagtcgtttg
aaggcagtggagttgtacgaggccagactagagcagagttataaggagcagcatgttctc
gccctggaggacaagaaagctgtactgcaaagagtaatcagtgagaaacagaatgctcac
aagggtaaggatgcagcagagcaggcagtcagacagcgacttgaatctctggagaagagc
ttctcgttcccccgttctgccatggctgtccaactctgcactgcacgtgccggcttcagt
cactgtcctgaggaacatgctttcttgactgttgattggccaatgcctagaaacaagcgc
tcagagacgagattccgggtttataaggatcttaggaggaaaggcttctatctaactcca
gcagggaagtttgggggtgattatctggtgtatccagatgatccactccgctttcatgcc
cacttcatcgccctgtgcttgccaatggatgaaaagttaccactctgtgatgttcttgct
atagcaaggcttggatccagtgtaaagaaaacagtgttactttgctcaccacaggatacc
agtgacagtggagaggaaatgggagaggaggttgtgtattcgtctctgcagtggagtgga
atagtatag
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