Neoarius graeffei (lesser salmon catfish): 132887937
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Entry
132887937 CDS
T10798
Symbol
ppfibp1b
Name
(RefSeq) liprin-beta-1b isoform X1
KO
K27096
liprin-beta
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132887937 (ppfibp1b)
Membrane trafficking [BR:
ngra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
132887937 (ppfibp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
PUMA_CC
Phage_portal_2
Motif
Other DBs
NCBI-GeneID:
132887937
NCBI-ProteinID:
XP_060779740
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All DBs
Position
6:complement(48279499..48395557)
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AA seq
981 aa
AA seq
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MMSDASDMLAAALEQMDGIIAGSKSLDYSNGIFDCQSPTSPFMGSLRALHLIEDLRGVLE
LMDTEEREGLRCQIPDSTAHSLVEWLQGHLSNGHISVTGDIYQDRLNRLESDKESLVLQV
SVLTDQVEVQGEKIRDLDLCLEEHREKLNSTEEMLQQELICRSALETQKLELIAEISNLK
RKLTDMEKERIEFDERFRDSEGLILEINELRYRISEMENERLQYEKKLKSTKEELAILRR
QLDGKDGELKRLHDETGSRSPTPAGLETTEREDTFKQRLKEKHLEVQRMKKAVESLMAAN
EEKDRKIEELRQSLTRYKKVQDMVMSVQGRKDKLKEEESDESHSDSSLSVSMATSVSVDA
EKSVVSCAEEVKSQDEPTMFVSALQVPSLTSTSQPNLETDVDLEPVQSQSDTVHQEPSQS
QEPAINTSLESVEVLKSSSLTKLDGSTSEKRPLAVVKSPAESRAFEEFNKITALPPKSTS
SSRAVEDDTFGTKKARSSFGRGFFKLRGGKRTASAPNLAETEHDGMDHLDLAGMPQKSSN
SDSTHTLSSCLEGKKKSKGIKAFIGKLTRSQSTTFTLDDNLSENEFKRGGVRATAGPRLG
WSRDLHNTNSEVDAPFARWSREQVCDWMQEQGLGLYVNLARQWISSGQTLLQASPQNLEK
ELGIKHPLHRKKLQLALQALGSEEDDNKGKLDYQWVTRWLDDIGLPQYKTQFDEARVDGR
MLHYMTVDDLLSLKVGSVLHHLSIKRAIQVLRLNNYEPNCLRRRPSDENNITPAEISQWT
NHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMALLLNIPPNKTLLRRHLAT
HFNLLVGSEAQQTKQECMENPDYTLLTATAKVKPRKLAFGSFGTLKKKRQEDNEEYVCPM
DVEMPKGHSFQKGLRGMELHIYEDDLDRLEQMEDSEGTVRQIGAFSEGINNLTSMLKDDE
FFKEIVTSSPNPSVTDDDSNV
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgacgccagtgatatgttggcagctgctttggagcaaatggatggcatcata
gcaggctccaaatcacttgattattccaatgggatctttgactgccagtctccaacttca
ccgttcatgggaagcctgcgagcgctgcaccttatcgaggatctgaggggggttttggag
ctcatggacaccgaggagagagagggactgcgctgccagatacccgattcgacagcacac
agtctggtggagtggctacagggacacctatcaaatgggcacatttcagtgactggtgat
atttaccaagacagacttaatcggcttgaaagtgacaaggaatcccttgtgcttcaggtg
agtgtcttaacagaccaagtggaagttcaaggagaaaagataagagacctagacttgtgc
cttgaggaacaccgtgaaaaactgaattccactgaagaaatgctacagcaggagcttatc
tgcaggtcagcgcttgagacccagaagctggagctgattgctgagatttccaatttaaaa
cgaaagctgactgacatggagaaggagagaatagagtttgatgaaagattcagggatagt
gagggtttgatcctagagattaatgagctgaggtatcgcatttctgagatggagaatgaa
cggttgcagtatgaaaagaaactgaagtctaccaaggaggagctggctatattaagaagg
cagctggatggtaaagatggagaactaaagaggctacatgatgagacagggtccagatca
ccaacacctgcaggattagaaaccactgagagagaggatacttttaaacagaggctcaaa
gagaaacatttggaagtgcaaagaatgaagaaagcagtcgagtcacttatggcagccaat
gaagaaaaggatcgcaagattgaggagcttcgacagtcacttacacgttataagaaggtg
caagacatggtcatgtcggtgcaagggagaaaagataaattgaaagaagaagaaagcgat
gagagccacagtgacagctctctctccgtttcaatggcaacgtcggtttccgtggatgcc
gagaagtctgtcgtgtcatgtgccgaggaagtgaagagtcaagatgagccgacaatgttt
gtcagtgcgctgcaggtgccttcactcacatccacatcacaacccaacctagagactgat
gtagacctggaaccagtgcagtcacagagtgatacagtgcatcaggagccaagtcagtca
caggaacctgccataaataccagtctggaaagtgtggaggtcctcaaatctagcagcctg
accaaactggatggcagcacaagtgagaagaggcctttagctgttgtaaagagtccagca
gagagtcgtgcttttgaggagttcaacaagattacagccttaccaccaaagtccactagc
agctcccgtgctgttgaagatgacacttttggtacaaagaaggcgagatcctcctttgga
cgaggtttctttaagctcagaggaggcaaaagaacagccagtgctccaaatcttgctgag
acggagcatgatggtatggatcacttagatcttgcagggatgccacagaagtcaagcaat
agtgatagcacacacacactctccagctgcctagagggcaagaagaagtcgaagggaatc
aaagcattcataggaaagcttacaagaagtcagtcaaccacattcaccttggacgacaac
ctatcagagaacgagttcaagcgaggcggcgtccgagccacagccggtcctaggctgggg
tggtcacgtgacctgcacaacactaacagtgaggtggatgctccatttgcgcgctggtcc
cgggagcaggtgtgtgactggatgcaagagcagggactgggcctgtacgtaaacctggcc
agacagtggatttcctcaggacagactctcctgcaggcctctcctcagaacttagaaaag
gagctgggcatcaagcatcctctccacaggaagaaactgcaactggccctacaagcactg
ggctctgaagaggatgataacaagggcaaactagactaccaatgggtgaccaggtggctt
gatgatattggactgcctcaatacaaaacccagtttgatgaggcaagagtggatgggcga
atgcttcactacatgaccgtggatgacctcctgtctctgaaagtgggcagtgtgctgcat
cacctcagcattaagcgagcaatccaagtgctgcgcctcaacaattacgagcccaactgt
ctccgacgcagaccctcagacgagaacaacatcactccagctgaaatctctcaatggacc
aatcaccgtgtgatggagtggctgcgttctgtggatctggcagaatatgcccctaaccta
aggggcagtggagttcatggaggactgatggttctcgagcctcgttttaatgtggagaca
atggcactgcttctgaacattcctcccaacaagaccttgctccgaaggcacctggctact
cattttaacctgctggtgggctccgaggcccagcagacaaagcaggagtgtatggagaat
cctgactacactttactcactgcaaccgctaaagtcaagccacgaaaactggcattcggg
agctttgggactttgaagaagaagcggcaggaggataatgaggagtatgtgtgtcccatg
gatgtggagatgccaaaaggacacagtttccagaagggattgagaggcatggagcttcat
atttatgaggatgacctggaccgactagagcagatggaggattccgagggaactgtacga
caaattggggcattctcagagggcatcaacaacttgacgagtatgctgaaagatgatgag
ttctttaaggagattgtaacatcatcccccaaccccagcgtgactgatgatgactccaat
gtttga
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