Neoarius graeffei (lesser salmon catfish): 132887967
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Entry
132887967 CDS
T10798
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132887967 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132887967 (nup93)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132887967 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TarH
Motif
Other DBs
NCBI-GeneID:
132887967
NCBI-ProteinID:
XP_060779792
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All DBs
Position
6:complement(51763581..51854200)
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AA seq
820 aa
AA seq
DB search
MDTEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDTADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDADIQGFLRNERENALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFISEVGAPGRSALDS
VEVAYGRQIYVFNEKVVNGHVQPNLGDLCASVADSLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRVSVEMQMAFVRQALTFLESSYKKYTMMTVFGNLHQAQLGGVPGTYQLVHSFLNI
KLPGPMPGMQDGEVEGHPVWAVIYYCLRCGDLAAAMQVVNRAQHQLGDFKTWFQEYMNSP
DRRLAPATENKVRLHYRRVLRNSADPYKRAVYCLIGKCDIADNHGEVADKTEDYLWLKLS
QVCFDEDGSSSPQDRLTLAHLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAIAFL
FRVERLRSHAVHVALALYELKLLLKSSGQSAQLLSQEPGDPPMVRRLNFIRLLMLYTRKF
EATDPREALQYFYFLRNEKDNQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTLAIIAKVASEAENKGLFEEAVKLYELGKNPDKVLELMNKLLSPVIAQVSAPQSN
KERLKNMALGIAERYRNNGIAGEKSVDGTFYLLLDLMTFFDEYHAGHIDRAYDVMERLKL
VPLSQDQVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGVTAGTPGRQQRTLE
DRDSVLRSQARALITFAGMIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggataccgagggcttcggggaactgctgcagcaggccgagcagctggcagcggagacc
gaggccgtgtctgagctgccacacgtcgaacgcaatcttcaggagatccaacaggctgga
gagagactgcgctctcgcaccctcacacggacctcccaggacacggccgatgtcaaagcc
tcaattctcctgggatccagaggactcgacatctttcacatctcccagcgcctggagagc
ctgagcgcagccacaacctttgagccactggaaccagtgaaagacgcagacattcagggc
tttctgaggaatgagagagaaaatgcactgctgtctgctattgaggagtctcgccgcagg
accttcctgctggcggaggagtatcatcgtgagtccatgttggtgcagtgggagcaggtg
aagcagagagtgctgcacaccctgctgggagcaggcgaggatgcactggacttcagccag
gatgtagagccgagttttataagtgaagtaggagctcctggacgcagcgctctggacagt
gtggaggtggcttatgggcgacagatctacgttttcaatgagaaggttgtaaacggacac
gttcagcccaatctgggagacttgtgtgcatcagtagctgacagtctggatgataagaat
gtttctgacatgtggctgatggtgaagcagatgacagatgtgctgctggtgccagccaaa
gacacactgaagagtcgtgtctctgtggagatgcagatggcttttgtcagacaggccctg
actttcctggagagcagctataagaagtacaccatgatgacggtgtttgggaacctgcac
caggctcagttaggtggcgtgcctggcacttatcagcttgtgcacagcttcctcaacatc
aaacttcccggcccgatgccaggcatgcaggatggggaggtggagggccacccggtgtgg
gctgtgatctattattgcctgcgatgtggagacctggcagcagccatgcaggtggtgaac
agagcgcagcaccagctgggagactttaagacctggttccaggagtatatgaacagcccg
gaccgccgcctggcgccagctacagagaataaagtgcgactgcattaccggcgtgtgctg
cgcaatagcgccgatccatacaaacgtgccgtctactgcctcatcggcaagtgcgacatc
gccgataaccacggagaggtggctgataaaacagaagactatctgtggctcaagctgagc
caggtgtgttttgatgaagatggaagcagctccccacaggacagactcactctggcccac
ttacagaagcagctcctggaggactacggcgagtctcatttctcagccagtcagcagccg
ttcctttacttccaggtgctttttctgactgcgcagttcgaggcagcgatagcgttcctc
ttccgtgtggagcgtctacgcagtcacgctgtgcacgtggccctcgccctctacgaactt
aaactgctactcaaatcatcaggacagagcgcacagctattgagtcaggaaccaggagat
ccccccatggtacggcgactaaacttcatccgcctcctcatgctctacactcgtaaattt
gaggccacggacccacgagaggctctgcagtacttctacttcctgcggaatgagaaagac
aaccaaggagagaacatgttcatgcgctgtgtcagtgagctggtcattgagagtcgtgag
tttgacatgcttctgggaaggctggaaaaagacggaagcagaaagcctggcgtgattgac
aagtttgccggagacacactagccatcatcgccaaagtggcctcagaggccgagaacaag
ggcctgtttgaggaagctgtcaaactctatgagctaggcaagaaccctgataaagtgctg
gaactgatgaataagttgctgagtccagtaattgcccaagtcagcgcaccacagtcgaac
aaagagagactcaagaacatggcgctgggtatcgctgaacggtaccgcaataatggtata
gctggagagaagtctgtggatggtaccttttacttgctcctggacctcatgaccttcttc
gatgaataccatgcgggccacattgaccgtgcatatgacgtaatggagaggctaaagctg
gttcctttgagccaagaccaagtagaggagagggtagcagcgttcaggaacttcagtgat
gaggtcagacacaatttatccgaggtgcttcttgccactatgaacattctgttcacacag
tacaagcgtctgaagggcgtgacagcaggaactccgggcagacaacagcgcacgttagag
gaccgagactcggtcctgcgcagccaggcccgggcactgatcacttttgctgggatgatc
ccgtaccgcatggccggagacaccaatgccaggctggtacagatggaagtcctgatgaac
tga
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