Neoarius graeffei (lesser salmon catfish): 132887982
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Entry
132887982 CDS
T10798
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04115
p53 signaling pathway
ngra04120
Ubiquitin mediated proteolysis
ngra04137
Mitophagy - animal
ngra04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132887982 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
132887982 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132887982 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
132887982 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132887982 (siah1)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132887982 (siah1)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
132887982 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
132887982
NCBI-ProteinID:
XP_060779824
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All DBs
Position
6:53652132..53696999
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AA seq
330 aa
AA seq
DB search
MSPTVRLQPVYSWKGVFKLFACVAARTASKPKEVHTFQEKNIALLGNHMDEEMSRQTATA
LPTGTSKCAPSQRVNTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCC
PTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSCPCPG
ASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLV
LEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIM
NSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccaccgtgaggctacagcctgtctactcatggaagggggtgttcaagctcttc
gcgtgcgtagctgcccgaacggccagcaagcctaaagaggtccacacgtttcaagagaag
aacatagccttactggggaatcatatggacgaagaaatgagtcgccagactgccaccgcg
ctgcccacaggaacctcaaagtgcgccccctcccagcgtgtgaacaccacagcctccaac
agtgacctagccagcctgtttgagtgcccggtgtgttttgactatgtgctgcctccaatc
ctgcaatgccagagcggccacctggtgtgcagcaactgccggcccaagctgacctgctgt
ccgacgtgccgcggcccattgggctcaattcgtaacctggccatggaaaaggtggccaac
tccgtgctgttcccatgcaagtacgcctcgtcgggctgcgaagtgacgctgccacacaca
gacaaggccgagcacgaagagctgtgtgagttccggccatactcgtgcccatgtccgggt
gcttcgtgcaagtggcagggctcgctggacgcagtcatgccacacctgctgcaccagcac
aagtccatcaccacgcttcagggcgaggatatcgtcttcctggctacggacatcaacctg
cccggtgccgtcgactgggtcatgatgcagtcctgcttcggtttccacttcatgctggtg
ttggagaagcaggagaaatatgatgggcatcagcagttctttgccatcgtacagctgatc
ggaacacgcaagcaggctgagaacttcgcctaccgactggagctgaacggccaccggcgg
cgcctcacctgggaagccacaccacgatccatccatgagggtattgccacagccatcatg
aacagtgactgtctagtgtttgacacctccattgcccagctgtttgctgaaaatggaaac
ctgggtatcaatgtcaccatatccatgtgctga
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