Neoarius graeffei (lesser salmon catfish): 132887986
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Entry
132887986 CDS
T10798
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132887986 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngra03021
]
132887986 (sf3b3)
03041 Spliceosome [BR:
ngra03041
]
132887986 (sf3b3)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132887986 (sf3b3)
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
132887986 (sf3b3)
Spliceosome [BR:
ngra03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
132887986 (sf3b3)
Complex B
132887986 (sf3b3)
Complex C
U2 SnRNP specific factors
132887986 (sf3b3)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
132887986 (sf3b3)
TFTC complex
132887986 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
132887986
NCBI-ProteinID:
XP_060779836
LinkDB
All DBs
Position
6:complement(53812959..53898975)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGITHAIHGNFSGTKQQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG
IIRSLMAFRLTGGTKDYVVVGSDSGRIVILEYHPSKNMFEKVHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGAI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRRFVIHPETNNLVLIESDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGSGQWASLVRLINPIQGNTLDLVQLEQNEAAFSVAVCHFANGG
DEWYVLVGVARDMILNPRSVGGGYIYTYRLVGGGEKLEFVHKTPVEDVPLAIAPFQGRVL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVVVSDIQESLFWVRYRRNENQ
LIIFADDTNPRWITTACLLDYDTMAAADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKADVIMNYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacctgaccttgcagcgtgccactggcatcactcatgccatccatggc
aacttctcaggtaccaagcagcaggagattgttgtttctcgcggtaagattctggagcta
ctgcgccctgatgcgaacacaggcaaagttcacacgctgctcaccatggaggtgttcggc
atcatccgctctctcatggcgttcaggctgactggtggcacaaaagactacgtcgtggtg
ggcagtgattcgggccgtatcgttatcctggagtatcacccctccaagaacatgtttgaa
aaggtgcaccaggagacctttggcaagagtggctgtcgacgcattgttccaggacagttc
ctggctgtggatcccaaaggcagagctgttatgatcggtgctatagagaagcagaaattg
gtgtacatcctgaatagagatgcagctgctcgcctcaccatctcgtcccctctggaagct
cacaaggctaacacgctggtctatcatgtggttggggtggatgtgggttttgagaacccc
atgtttgcctgtcttgagatggactatgaggaagctgataacgatcccacaggggaagcg
gcagctaacacacagcagactctgactttctatgagctggacctgggactcaaccacgta
gttcgcaaatacagcgaggctctggaagagcacggcaacttcctcatcacagtgccaggt
ggctctgatggtccgagcggtgtgctcatttgctcagaaaattacatcacttacaagaac
tttggggaccagccggatatccgctgcccaatcccacgcagaaggaatgacctggacgat
ccagagaggggcatgatctttgtctgttcagccacacacaaaaccaagtccatgttcttc
ttccttgcccagactgagcaaggagacatcttcaaggttaccctggaaacagatgaggag
atggtcactgagatcaggatgaaatattttgacaccatccctgtcgccactgcaatgtgt
gtgttgaagaccggcttcctattcgtgtcatcagagtttggaaaccattatctgtatcag
atagcccacttgggagatgatgatgacgaaccagagttctcttctgccatgcctctggag
gaaggagacacctttttcttccagccacgaccccttaagaacctggtacttgtagatgaa
caggagaatctttcccctatcatgtcctgccagattgccgatttggccaacgaggacaca
cctcagctgtatgtggcttgtggtagaggaccaaggtctacgctaagggtccttagacat
ggtctggaggtctccgagatggcggtttctgagcttcccggtaaccccaatgctgtgtgg
actgtgaggaggcatgtagaagacgagtttgacgcctacattattgtgtccttcgttaac
gccacactggtgctgtcaattggagaaaccgtggaagaagtgacagattcaggcttcctg
ggtactaccccaactttgtcctgttctttgctgggagatgatgctctggtgcaggtctac
ccagatggtattcgccatattcgagcagataagcgtgtcaatgagtggaagactccagga
aagaaaacaattgtgcgctgtgccgtgaaccagcggcaggtcgtcattgccctgactgga
ggagagctggtgtattttgagatggatccgtcaggccagctgaatgagtacactgagaga
aaggagatgtctgcagatgtggtgtgcatgagtcttgcgaacgttcctccaggtgaacag
cgctcgcgcttcctggccgtgggcttggtggataacacagtgcgcattatctcccttgac
ccctcggattgtctacagccactgagtatgcaggctctgcctgcgcagccagaatctctg
tgtatcgtggagatggggggtgtggagaaacaagatgagttgggagagaaaggtgccatc
ggattcctctacctcaatattggcctgcagaatggtgtattactccgtactgtgctggac
ccagtgactggagacctgtctgacactcgcacacgctacctgggctctcgaccagtgaag
cttttcagagtgcgaatgcagggacaggaagctgtgttggccatgtccagccgatcatgg
ctgagctactcgtaccagtcacgtttccatctgacgccgctttcctatgaaaccctggag
tacgcgtcagggtttgcttcagagcagtgtcctgaaggcattgtagccatctctaccaac
acactgagaattctggctctggagaaactgggtgctgtgtttaaccaggtagctttcccg
ctgcagtacacaccgcgcagatttgtcattcacccagagaccaacaacttggtcctcatt
gaatcagaccacaatgcctacactgaagccaccaaggcccagcgcaagcagcagatggca
gaggaaatggtggaggctgctggagaggatgagagggagctggctgcagaaatggctgct
gcctttttgaatgagaaccttccagaagcaatctttggtgccccaaaggctggctcaggg
cagtgggcctcactggtgcgcctgatcaaccccatccagggcaacaccctggatttggtt
cagctggagcagaatgaagctgcgtttagcgtggctgtttgtcactttgctaatggaggc
gatgagtggtatgtgttggtgggtgtggcaagagacatgatccttaacccacgctcagtg
ggcggtggctacatttatacctaccgcctggtaggaggtggtgaaaagctggaatttgta
cacaagactccagtggaggacgtccctctggccatcgcccccttccagggcagagtgtta
gtgggggtgggcaaactactgcgcatctacgatcttggcaaaaagaagctgctccgcaag
tgtgagaacaagcatgttcctaacctggtgacgggcatccacaccattggccagcgtgta
gttgtgtcggacatccaggaaagtttgttctgggtgcgttacaggcgcaacgaaaaccaa
ctcatcatttttgccgatgacacaaacccacgctggattaccaccgcctgcctgctcgac
tatgacaccatggctgcagctgacaagtttgggaatattagcattgttcgtctgccgcct
aacaccagtgatgatgtggatgaggaccccacagggaacaaagcgttgtgggacagaggc
ctgcttaatggagcctcgcaaaaggctgatgtaattatgaactaccacataggagaaacg
gtcctgtcactgcagaagaccacactcatccctggaggctcagagtctctggtgtacacc
acactgtcaggtggcattggcatccttgtgcccttcacctctcatgaggaccacgacttc
ttccagcacttagaaatgcacatgcgctcagagttccctccactttgcggccgagaccat
cttagcttccgctcctattacttccccgtgaagaacgtaattgatggagatctctgtgag
cagtttaactccatggatccccataaacagaaaagtgtcgctgaagagttggaccgcaca
ccaccagaagtgtcgaagaaactggaagacatccgcacacgttatgccttttaa
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integrated database retrieval system
