Neoarius graeffei (lesser salmon catfish): 132888052
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Entry
132888052 CDS
T10798
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1 isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
132888052 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngra03400
]
132888052 (fan1)
Enzymes [BR:
ngra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
132888052 (fan1)
DNA repair and recombination proteins [BR:
ngra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
132888052 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
BsuBI_PstI_RE
PRP21_like_P
SduA_C
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
132888052
NCBI-ProteinID:
XP_060779952
LinkDB
All DBs
Position
6:61350132..61442434
Genome browser
AA seq
988 aa
AA seq
DB search
MDLKPGRSKSKAHVRPLRRLSVAKKDDQKGNAKLQKGPSITSFFKNTPPSKLACPLCGKF
VPRFKINEHMDSQCRDFLEANDVQAAAAQDNEQGKISWPFSNNAPQSPNKEKNASVPEND
QETKTSPYFNKCGIMRQESPKTSSNAREVKIVSLGRLSSKLSKKVLFVSEDSEVHSTQMS
IKEEPISSEPSSSQKENFDENVNVKSEHQETNSTLTTRAPTENLPRVEKVEQATPKVKSL
GPDVSQTTEATASLRLMKRKKEESPGAGVTPNMQKKTRYSGKRTAKSGSTDPLPEVEVSK
SKSKDVERDQIMAPDGGSDLPQDDGTSSVEHGSPRRPYYLQNFLTVLETVLENKDDRVLF
SDEELSSIQRFKQLSAPGQMLYVRLFQRKLKWLQVSKLDYAEISSDLSPVVQELVSNGFL
QTESELAEIQDVLDLLPAPELRSLAKTFHLGGPGNSSQKQQLVEGLLLLSKQRSLFSLVP
GQSSTGAVILKRAKQLAGSCVLLCRDPRAMFSRALLLFSLTDTLEEEEMASGGQGQLYTI
LLVNSGRLAFPAYTVQRSARIFRDREDLIRYEAAMRTLQEVITAMQAGCWEDAHVLYASA
KSNWQNMKQTYDLSWQEELPVFLRCFTVGWACTRILSRGVEILQRLRRYEDAVDELRSLL
SQSVFCPDSRGRWWDRLALNLQQHLKCHEQAIYAIRDGLNDPLVRTGHRLSLHQRATRMK
ESASCKKYRLLLRDLPSVRVHSVTHVTIRGQLFPHEGGMGKSVFLRPAVGHEGSGEGGDA
MVMCSVEELALAHYRELGFDQGIHGEGSTFSTLFGLLMWDVVFMNVSDVFRTSYQTCPLD
LYTDCFYENRKEVIEARAELLSEASTETLQQLLADVWNSQEGRVCALVNWERFSCLQQAQ
SLVGCLGGRFLSGVVLRMAKDYRHSKGGLPDLVVWNASNNSYKLVEVKGPNDRLSQKQQL
WLDELQKLGADVEVCHVTAVGARGARLE
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggatctcaagcctggtagaagcaagtccaaagcccatgtcaggcctctaagaagactt
tctgtagcaaaaaaagatgaccagaagggcaatgcgaaactgcagaagggcccttctatt
acttcttttttcaagaacacaccaccttccaaactggcctgcccactgtgtggcaaattt
gtacctcgtttcaaaatcaatgaacacatggactctcagtgtcgagactttcttgaggca
aatgacgtacaggcagcagcagcccaggacaatgaacaagggaaaatatcttggcccttt
tcaaataacgcccctcagagtccaaataaggagaaaaacgcaagcgtgcctgaaaatgat
caggagacgaaaacaagcccgtattttaacaagtgtggcataatgagacaagagtcaccg
aagacaagttccaatgctagagaggtcaagatagtcagtcttgggcgtttgtcttcaaaa
ctctccaaaaaagtactgtttgtttcagaggactccgaagttcatagcacccaaatgtca
atcaaagaagagccaatctcaagtgagccaagtagttcacaaaaagaaaactttgacgag
aatgtaaacgttaaatccgaacaccaagagacgaattcaacgttaactactcgggcgcca
actgaaaatctacctcgtgttgaaaaagttgaacaggccacgccaaaagtaaaatcactg
ggtcctgatgtttctcaaacaacagaagccactgcttcattgagattaatgaagaggaag
aaagaagagtctcctggtgcaggtgtcaccccaaacatgcagaagaaaacgcgatattcg
gggaaaagaactgccaaatctgggagcactgatccattaccagaggttgaagtcagtaaa
tccaaaagcaaggatgtagaaagggaccagattatggctccagatggaggcagtgatctt
ccacaggatgatggtacctcctctgtggaacatggttcacccagacggccatactacctt
cagaacttcctgactgttctggaaaccgtgctggagaataaggatgaccgagtgctcttc
agtgacgaggaactctcgtctatccagagattcaagcagctgtcggcgcctggacagatg
ctgtatgtgcgtctgtttcagaggaagctgaaatggctgcaagtgagcaaactagattat
gctgagattagttcagacctcagtcctgttgtacaagaacttgtctccaatggcttcctc
cagacagagtctgaacttgccgagatccaggacgtattagatcttctacctgctccggag
ctccgaagcctggccaagactttccacctgggaggtccagggaacagtagccagaaacag
cagctggtggaagggcttctccttttgtccaaacagcgctctctcttttctcttgtccct
ggccaaagcagcactggtgcagtcattctcaaaagggcaaaacagctagcgggctcctgt
gtgttgctgtgtcgggatcctcgcgctatgttctctcgtgccctcctacttttctctctt
actgatactctggaggaggaggaaatggcatcagggggtcaaggccaactctacactatt
ctcctggtcaactctggacgtctggctttccctgcctacacagttcagcggtctgcccgg
atatttagggacagggaagatttaatcagatacgaagctgccatgcgaacccttcaagag
gtgattacagcaatgcaggctggttgctgggaggacgctcacgtcctctatgcttccgcg
aagtctaactggcaaaacatgaagcagacgtatgacttaagttggcaggaggagttaccc
gtgttcctgcggtgcttcacagtaggctgggcatgtacacgtatattgtctcgaggagtc
gagatactacagaggctacgtcgctatgaggatgcagtggacgagctgcggtctcttttg
tctcagtcagtgttctgtccagacagcagagggcgctggtgggacagacttgcactcaat
ctccagcagcacctaaaatgccatgagcaggccatctacgccatcagggatggattaaat
gatccactggtccggacaggtcaccgtttgtcactgcaccagagagccaccagaatgaag
gagtcagcgagttgtaagaagtaccgcctgctgctccgagaccttccttctgtccgtgtg
cacagtgttactcatgttacaatccgaggccagctttttccacacgagggcggtatgggc
aaatcggtgttcctcaggcctgctgttgggcacgaaggctctggagaaggaggcgatgcc
atggtcatgtgctctgtagaggagctggctttggcgcactacagagaactcggcttcgat
caaggcattcacggagaaggctcgacattctccactttgtttggccttctgatgtgggac
gttgtcttcatgaacgtctcggatgtcttcagaacatcctatcagacgtgtcctctggac
ttgtacaccgactgtttctacgagaatcgaaaggaggtcatcgaggcccgtgctgagctg
ttgtccgaggcgtccacggaaacactgcagcagctgctggctgatgtgtggaactcacag
gagggaagagtttgtgcacttgttaactgggagcgattctcttgtcttcagcaagcccag
agcttagtaggatgtctgggaggacgatttttaagtggagtcgttcttagaatggcaaaa
gactacagacacagcaaaggagggcttcctgacctggttgtgtggaacgcttcaaataac
agctataagctagtggaggtgaagggccctaatgaccgtctgtcccagaaacagcagctc
tggctggatgagctgcagaaactgggtgctgatgttgaagtgtgtcacgtcactgctgtt
ggagctcgtggagcgcggctggaatag
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