Neoarius graeffei (lesser salmon catfish): 132888064
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Entry
132888064 CDS
T10798
Symbol
dhx34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132888064 (dhx34)
Enzymes [BR:
ngra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132888064 (dhx34)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
132888064 (dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
zf-C2H2_DHX34
HA2_N
DEAD
AAA_22
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
132888064
NCBI-ProteinID:
XP_060779981
LinkDB
All DBs
Position
6:66265737..66422251
Genome browser
AA seq
1138 aa
AA seq
DB search
MSESGGSIRGWDWSSPGCRARMDEIFFRHHDYIQAKSIEHKEFWVFFERFQRFKTRREVE
SSNPSKSMAELRKKYARGSVDLGLPKEYDARYRINIFVNTGDVEYRLGDLHSRRHKDDPT
GLSSQITDCRLALLHFLDFTQKQNFCKIVKLHREQKSLPIFQYRNRIVELVQTHQVVVVA
GDTGCGKSTQVPQYLLASGFSHIACTQPRRIACISLAKRVSFESLAQYGSKVGYQIRFES
RRTSSTKLLFLTEGLLLKQIQHDAVLSQYHVVIVDEVHERHLHSDFLLGVFHSLLHRRPD
LRLVLMSATINIKLFSNYFNNAPVLQVPGRLFPIQVIYQPIPEKEQVSKLEKLDPRPYLR
VLQGIDQRYPPEERGDLLVFLSGIAEISTIMEACQTYAAHTGRWIILPLHSTLSLEQQNK
VFDIAPPGLRKCIIATNIAETSVTIDGVRFVVDSGKVKEMTFDPKTKMQRLQEFWISQAS
SEQRKGRAGRTGPGVCYRLYAESDYEGFAPYSVPEIHRVALDLLVLQMTSMGLGDPCSFN
FIDPPATLSIQASVKYLKDQGALDTQGALTPIGSLLAKLPVDVVIGKMLVLGSLFNLVEP
VLTVAAALSVQSPFLRSTQHNPDCITARQPLQSDLGDPFTLLNTFNAWVQVKGDRGGGSR
KWCKRRGLEEQRLYEMANLRQQFKELLRSHGLVEPESCHITEDRAQRRKRRTERQRLYQL
KREHDLKESSCRKILHLEEGLEQGSSCDSDEEEAGSSKDKDSVAQDVDIQEVKFKLRHDV
GKLQGDAYTSATLSSRQQALFRLVLCRSLYPQLALPDEHNSARKDSEQVFHTHNKKGVMI
HPTSVFASNPDLLHITQYESSAEKEQSDGHQLLAFVTLLETNKPYVSNCVRVPALQVLLL
VANSIDSNADCTRLVVDGWLELVISDSLAGLKVLSSALMVRDNWDSLLQAKLSQSGLRSA
VVQGLAGPIPPHHDLEKVTEGLARFLLYTKVSYSLRRLTLLQSQNLYIGPQQNIEFPPPP
LFPSMKAEPDSIKGGLRVTTYFTYNCLCDSKDLYSECLRTFWTCPHCDLHMPFTPLEQMQ
HEVTCRPLQEQQIEPEDPETEKSGSLSNLTRLYHCNICKKDLTLTSTEILKHKHQHQS
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagagtggagggagcatccgtggctgggactggagcagtccagggtgtcgtgcc
cggatggatgagatattttttcgccatcatgactacattcaggcgaaaagcattgaacat
aaagagttttgggttttctttgagcgctttcagcggtttaaaaccagaagggaggttgag
agctcaaatcctagtaaaagtatggcagagttacggaagaagtatgccaggggctcagtg
gatcttgggctcccaaaggaatacgatgcccgatacaggatcaatatctttgtaaacacc
ggcgatgtagagtatcgtctgggtgatttgcatagcaggcgacacaaggacgacccgacc
ggcctaagcagccagatcacagactgtcgccttgccctgcttcattttctagacttcact
cagaagcagaatttctgtaaaatcgtcaagctgcaccgtgaacagaaaagcctgcctatc
ttccagtaccgtaaccggattgtagagctggtccaaactcaccaagtggtggtggtggct
ggagacaccggctgtgggaagtccacacaggtgccccagtacctgctggcgtctggcttt
agccatatagcctgcactcagcctcgccgcattgcctgcatttcccttgctaagagagtg
agctttgagagtcttgcccagtatggttccaaggttggttaccagatccgttttgagagc
agacgcacgtcaagcactaaactcctgttcctgactgagggtctgctcctcaaacagata
cagcatgatgctgtgttatcccagtaccatgtggtgattgtggatgaggttcatgaaaga
cacctgcactctgacttcctgttgggtgtattccattccttgcttcaccggcgaccagac
ctgcgcttagttcttatgtctgccaccatcaacatcaagctcttctccaactacttcaac
aatgcacctgtgctgcaggtgccaggtagactcttccccattcaggtgatataccagccc
attcctgaaaaggaacaggtgtccaaactggaaaagctggacccaaggccatatctgcgt
gtgctccagggcattgaccagcgctatcctcctgaggagcggggcgatctgctggttttc
cttagtggtatagctgaaatctccaccatcatggaggcatgccaaacctatgctgcacac
accggtcgctggattatactgcctttgcatagcaccttgtcactggaacaacagaataag
gtctttgacattgctcccccagggttgaggaaatgcatcattgctaccaacatagctgaa
acctcagtcaccattgatggggtgcgctttgtcgtcgattcaggcaaagtaaaggaaatg
acttttgacccaaagaccaagatgcagagacttcaggagttctggattagtcaagccagt
tccgagcagaggaaaggtcgtgcaggtcgaacagggccaggagtttgctaccgactctat
gctgagtcagactatgagggctttgccccttactctgtcccggagatccatcgagtggct
ctagacttgttagtgctacagatgacgagtatgggtctgggagatccttgttcttttaac
ttcatagaccctcctgcaaccttgagcattcaggcatctgtgaagtatctaaaggatcaa
ggggcactagacactcagggagcactcacccccattggcagtctgctagccaagctgcct
gtggatgtagttattggtaaaatgctagttctaggttcactgttcaatctggtggagcca
gtgttgactgtagctgcagcactgagtgttcagtcaccatttctgcgcagtactcagcac
aacccagattgcatcactgcacgccaacctttgcaaagtgacctgggagaccctttcacc
ctgctcaacaccttcaatgcatgggtacaggtgaagggggataggggaggaggctccagg
aagtggtgcaaaagaagaggactagaggaacagagactgtatgagatggccaacctgaga
caacaattcaaggagctgttgaggagtcatgggctggtggagccggagtcctgtcacata
accgaggaccgggcccagcgcaggaagaggcgaactgaacgtcagagactgtaccagctg
aagagggagcatgacttaaaggagagcagctgcaggaaaatcttgcatctggaggaaggc
ctggagcaagggtcatcatgtgactctgatgaggaggaagcagggtcaagcaaggacaaa
gactctgtagcacaggacgtagacatacaggaagtgaagttcaaattgcggcatgatgtt
ggcaaacttcagggagatgcatacaccagtgcaacactgtcatctcggcaacaagctctt
ttcagactggtgctgtgccgtagcctgtacccacagctggccctgcctgatgaacataac
tctgcccgcaaggattcagagcaggtgtttcacactcataacaagaaaggtgttatgatt
caccccaccagtgtttttgccagtaatccagatttgctgcatatcactcagtatgaatcc
agtgctgagaaggagcagagtgatgggcatcagttgctggcttttgtaactctgcttgaa
actaacaagccctatgtttcaaattgtgtacgggtccctgccctgcaggttttgctgctg
gtggcaaattctatagacagcaatgcagactgcacacgcctggtggtggatggctggctg
gagctggttataagtgatagtttggcaggtctcaaagtgctatcctctgcccttatggtg
agggacaattgggacagtctgctacaggctaagttgagccagtcaggtttgagatctgct
gtggttcaggggcttgctggcccaataccaccccatcatgatttagagaaagtcacagaa
ggacttgcacgctttctcctgtatactaaggtgagttacagtctgagaagacttaccctg
ctgcagtctcagaacctgtacattggacctcagcagaacatagagtttcccccccctccc
ttgttcccttcgatgaaagctgaacctgattcaattaaaggaggtctacgtgtcaccacc
tacttcacctataattgcctctgtgactccaaagacttgtacagtgagtgcttgcggaca
ttttggacttgccctcactgtgacctgcacatgcccttcaccccactggagcaaatgcag
catgaggtcacctgtaggccactacaggaacagcagattgaaccggaggaccctgaaaca
gaaaaatctggatccctgtctaatctgactagactctaccactgtaatatctgtaagaaa
gacctaaccctcacctccactgagatacttaaacacaagcatcaacaccaatcctga
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