Neoarius graeffei (lesser salmon catfish): 132888097
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Entry
132888097 CDS
T10798
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132888097 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngra03041
]
132888097 (snrpa)
Spliceosome [BR:
ngra03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
132888097 (snrpa)
Complex B
132888097 (snrpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
132888097
NCBI-ProteinID:
XP_060780068
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All DBs
Position
6:complement(79899076..79919068)
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AA seq
278 aa
AA seq
DB search
MSGQELRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRTVKMRGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIQYAKQDSDIIAKMKGTYVERDRKKEKKKPKAAESGG
SKKGAAAGMAGVPAAMPGMPPMSQAPRMMPMPGQPPYMPPPGMMPPPGMGPGQMPPGAMP
PGQMMPGQMPGQMPQQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRH
DIAFVEFDNEVQAGAAREALQGFKITQTNAMKISFAKK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtctggccaggagttgcgcctaaaccacacaatttacatcaacaacctgaatgaaaaa
ataaaaaaagatgagctgaaaaagtctctttacgccattttctcacagtttggccaaatc
ctggatatcctcgtttcccggacggtcaaaatgcgagggcaggcctttgtaatcttcaaa
gaggtcaacagtgcctccaacgctctgagatctatgcagggctttcctttttatgataaa
cccatgcgtattcagtatgccaagcaagactcagacattatcgccaagatgaagggtacg
tatgtggagcgggatcgcaagaaggagaagaagaagcctaaagctgcggagtcaggaggg
tcaaagaagggtgctgctgctggcatggctggagttcctgctgctatgcctggaatgcct
cctatgagtcaagctcctcgtatgatgccaatgccaggtcagcctccttacatgccacct
cctggtatgatgccacccccaggtatgggccctggacagatgccaccaggtgccatgcct
ccaggtcagatgatgcctgggcaaatgccaggacagatgcctcagcaggtctccgagaac
ccgcctaatcacatcctgttcctcaccaacctgccagaggagaccaatgagctcatgctc
tccatgctatttaatcagttcccagggttcaaagaggtgcgtcttgttccgggtcgtcac
gacattgccttcgtggagtttgataatgaagtgcaggctggtgcagccagggaagcatta
cagggtttcaagatcacgcagactaacgcaatgaagatctcgttcgcaaagaaataa
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