KEGG   Neoarius graeffei (lesser salmon catfish): 132888117
Entry
132888117         CDS       T10798                                 
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04382  Cornified envelope formation
ngra04510  Focal adhesion
ngra04512  ECM-receptor interaction
ngra04518  Integrin signaling
ngra04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    132888117 (col4a5)
   04518 Integrin signaling
    132888117 (col4a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    132888117 (col4a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    132888117 (col4a5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    132888117 (col4a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ngra04147]
    132888117 (col4a5)
   00536 Glycosaminoglycan binding proteins [BR:ngra00536]
    132888117 (col4a5)
Exosome [BR:ngra04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   132888117 (col4a5)
Glycosaminoglycan binding proteins [BR:ngra00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   132888117 (col4a5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 132888117
NCBI-ProteinID: XP_060780144
LinkDB
Position
1:complement(73238927..73383188)
AA seq 1694 aa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NT seq 5085 nt   +upstreamnt  +downstreamnt
atggtccatgttgaaagggtggattctttaaaaatgaataaaaagttaaagagtctgcag
aagctcgtcgccgtgctgttcttcatatctctgtccataagcgttcagcagtctgagtgt
gcggcatgtcatggctgtgggaccggactgaagtgtgactgcagtggagtgaaaggagca
aagggtgagcgaggttttccaggtcaaacaggtcatccaggtgcaccaggataccctgga
ccagaagggccagctggacctcgtggacagaagggtgatgatggaccttcaggaccacct
ggatcgaaaggaataagaggacctcctggacttcctggatttgcagggacaccaggaatt
ccaggtcttccgggactggacgggcctccaggtccaaaaggaattgcgggctgtaacgga
acaaagggtgaaaaaggatttccaggaactggaggtttcccaggtggagacggtcaaccg
ggaccacgtggttatccaggacagaagggagagcctggtgaggtcattactgtagatacg
caaggaacaccaggacttccaggaagcatcggtcagccaggccccagaggagagccagga
cagcccgggttgccaggtcctattgggcctcagggtccgagaggttacgatggaccacca
ggtccccctggtctaccagggccaaagggaaatatggggctgaacttccaagggccaaaa
ggaaagaaaggtgaagctgggttacaggggcctcctgggcctccagggcaagttgaccag
ttaataggtgaaacagagggagtgattcatcgaggagagaagggtgaccgcggaccacct
ggaccacgtggatatcctggccctcctggaacacctggcccatacggcagtctgaaggga
gataaaggagagccaggagaacctggaaagaggggtaaacctggcaaagatggggacgtt
ggccctcctggacttccgggtgttataggagacactggtgaacctggttttccaggaaga
cctggagaaagaggtgagaaaggtgagcgaggactacctggacctccaggcgtggcgaca
gccttacctgggagccttgtcggccctaaaggagatcctgggcttcctggagtccctggg
aggaaaggagagccagggctagttggtatccaaggaccaccaggtcagccaggtcgtcca
ggaattggaggtcaaggcccacctggcccccctggttatccaggagagagaggacagaag
ggagatcaaggatcgcctggagcttctcttccaggttctcctggcagacctggaccacca
ggtttacaaggacctccaggacctcccggacctccagcattgcccaccggtgatggaaac
tgcatcccaggacctgctggtcttccaggcctgaatggggaccccggttacccgggagag
ataggccagaaaggtgaaaagggggaaacgtgtgtgaattgtttcgtaagcggcaacctc
atcccaggacctcagggtccacctggacgcccaggacctccaggcaatcctgggctccct
ggtttgaaaggagacagagggcccccaggcagccctggtttcatggggccatcaggttta
ccaggatcaggtggtttacctggagaacctggacagaagggtgaccctggtgaagcaatt
agccttgatggtatgaagggagacaagggagacacaggattccctggacctccaggtcag
cctggccgggacggaactcctggtcgaaatggagctcctggaccgcctggtcccaaaggc
acacctggttcccttacgcttaaaggtgaacgtggcccttctggagatgctggtctccca
ggctctcctggagacaggggccttcctggtgcccctggatttggcccacagggacctcgt
ggagagaaaggattccagggtgtgtcaggaaggcaaggacctcctggacctccaggtcag
aaaggtgaaccaggtctgacggtctctgagaaagggacacctggacctgccggacgtgat
ggtgatcccggtctacctggaaatccaggtaacccaggccaacctggctcccctggcttc
ccaggattacctggccagaaaggagagtctggtctcccgggcataggctttccaggccca
ccaggtcctaaaggattcccaggtattgcgggaagtcctggcaaccctggcaggcctgga
ccagctggtgtggatggaatacctggtgtacctggaccccgtggacctaagggtgaacct
ggttatggtatccctggccctcaggggtccccaggtttgcctggcagtaagggttttcct
gggcataaaggtgatcctggattccctggaaatccaggtgcacccggccgacccggtatt
gatggtcctcctggttataaaggcgatcctggtcatcctggtcctccgggtgcatctggt
cctcaaggcccccctggttttggtttacctggtttacctggaccagcaggacctcctgga
cctatgggcagtcctggttcccctggtttgaatggtgagaaaggagacattggttctcct
ggactggatattccaggctttcctggtgaccagggtcgtcccggattgcctggaccacct
ggcccaactggcccaactggaagccctggtaaacctggccaagatggactacctggattc
cctgggcaaaagggagaaatgggtgtgatgggcactccaggaactcctggtaatcctggc
agtcctggtgtgccaggatttcctggaccaaaaggtgataatggccagccaggactgcca
ggaaaccaaggtataaaaggaggaaagggagataaaggtgaaccaggtataagaggccca
gctggtatcagctatcctggtgcctcaaaaggattgaaaggagaaccaggacttcaagga
attagaggagcttcaggagaaaaaggtgttcctggccttccaggagatcaaggcatccct
ggacagaatggacgtgctgggccacctggacccccaggtccaaagggagatcctggaatt
ccaggaataccaggaacccctggtacccaaggaccgaaaggcggcatgggcgagatggga
tttcctggcccttctggagttaaaggaaacccaggtcaacctggacgacctggacagcct
ggctctccaggagcaccagggttcccaggaccaaaaggagaccctggaacaccaggattt
gggcaaccaggagctccaggacccaagggtgaacccggctctcctggtggccctggaggt
acagggccaaaaggtcaacaagggcccccaggaggtccagggatacctgggagccctggc
ccaaagggtgatcctggcctcccaggattccaaggtacacttggtgctcctggtcctaag
ggtctggatggagtcccaggtgcccctggtctagcaggcgcacctggaaggccaggaacc
cctggctcgcctggtttgccaggcacacctggagacaagggtcagcctggtcgtgatggt
attcctggacctccaggattaaaaggagagtcaggtataccaggttatggactcccaggt
cctccaggcattcctgggatgccaggtaacaaaggagactctggccttcctggccagcct
ggcagccctggtttccctggactaaagggtgatgtaggattgcctggtgcaccaggcaac
cctggtcttcaagggtcccctggtcctccgggtcagtctattcaagggcctaaaggcatc
cagggtcctcctggacctccaggaagaagaggttctcctggcacagaggggccccgtgga
ccaccaggttctggaggagtgaagggtgagaaaggctaccctggaaaccctggacaacct
ggtttaactggacagaagggagacactggatcaccaggttttacgggcccttctggacct
cctggacctgttggacctaaaggtgacagcggtcttccaggcattccaggattatcagga
cctaaaggtcagcctggtgcttctgggggtcctggcttgcgcggtgatcctggtgactct
ggtcctccaggtgctcctggtctgccaggtcaagctccaaccccaattgtggtgaaaggt
gctcaggggcctcctggtcctccgggaccccaaggaccccaagggctaccaggagaggca
ggactggaggggcttccaggtcagcctggtagtccaggtgacccaggtcctgatggacct
ccaggattcattggtcctgctggaaggaaaggagactctggaccctctgggcagccaggt
gggcggggtttacccggcacttctggtccagaagggcgtccaggtcctccaggtcctcca
ggtgtgtcttcagcatctcatggctttctgattacgcgacacagtcagtctatagatgca
ccttcatgcccagctggcacttctcccatctacgaaggctattctctgctctacgtccag
ggcaacgagagggcacatggtcaggacctgggtacggctggaagttgtctacgtcgtttc
agcaccatgcctttcatgttctgcaacatcaacaatgtgtgcaactttgcttcccggaat
gactactcttattggttgtccactcctaaacccatgcccatggacatggcaccgatccaa
ggagaaaacatcaaaccctacatcagcagatgtgctgtatgtgaagcaccaactatggtg
atagcggtgcacagccagaccatccaactgccatcatgtccgcagaactgggagccgctg
tggatcggctactccttcgtaatgtacactagtgcaggtgcagaaggctctggtcaggct
ctggcctcgcctggctcctgtctggaggagtttcgttcatctcccttcattgagtgccat
ggtcacggaacctgcaactactacggcaactcctatagcttctggctatccactgtcgaa
cagtctgaaatgttcaggaagccacagtctgagacactgaaagcagggaatctccagaca
cgcgtgagccgctgtgttgtgtgcatgaagagtacaagaacatag

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