Neoarius graeffei (lesser salmon catfish): 132888126
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Entry
132888126 CDS
T10798
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03022
Basal transcription factors
Brite
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132888126
Coactivators
SAGA/TFTC/STAGA complex
132888126
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
132888126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132888126
NCBI-ProteinID:
XP_060780120
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Position
6:complement(85570550..85846019)
Genome browser
AA seq
950 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLVGRSGNKAGGAKQHLGKALASRANTTSE
QQQQHHHHQQQQQQHKAGKERGSESTPAGRAASPESCVKASMSGSLSHSSTSSAKQDGAA
SPAASVSAAGRRAAAAAAASGSMETARHYGTRKKRGGARGSAASRSVNGAATSSSSSSSV
STNSPSSTGAAAVSIATARANSTTYTVSSASKSVALDKGTPTIALHRLPSHIVASIAQGR
NGTSVSALIHQGRVNHGKNFQSGEDKSKADVQPASVNSVPSAVCIAVTQSKPQPQPTSQP
QSKPQTPAQTQLQHQSAPQPQTQSQPQPRPAAPPQRITAPQLIVRPPQQQATIQLPPGFT
IPPGMVLVRTELGQLMMVPQQALAQAQAQSALSPRPAAPTTTATFRVTTPQSPVSIQTSR
AAPAVQNKVVQSQTLSPAPQTCTTSTTTTTTTATTTSTTTATPALTRVPLAVTTPQQHPA
ALAPQGPTLAPPTAAGPAPGATVISQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVK
GLVQDLLDAKIEPEEFTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQPLQS
KTTISPAGAVTGAVTTGNAPRQPNSTITPSQNIKRTGIIGGQVRMPVVITQTVRAAGAVG
KSPVVQAGKSPLAVSVQLSGAQKNKVNDPGGGSFRDDDDINDVASMAGVNLSEESARILA
TNSELVGTQIRSCKDEAFLPTGLLHRRILETAKKFGVTEVPLEAVNFIAHATQTRLRTVL
EKVSFIAQHRLDSSKDEEWHEQSSDVRSQLKFFEHLERLEKQRKDEQEREILLKAAKSRS
RQEDPEQARLKQKAKEMQQQELAQIRQRDANLTALAAIGPRKKRKVDSPGATSGAEVSGS
SVGSPASSLSSSRQFHRQRITRVNLRDFIFYLEQERETSRSLLLYRALLK
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagatatgctgttctctgaggtggatgagaaggcg
gtgagcgacctggtgggctcgctggagtcgcagcttgtcggccggagcggaaacaaggct
ggcggcgctaagcagcacttaggaaaagcgttagcttctcgggctaatactacatccgag
cagcagcaacaacatcatcatcatcaacaacaacaacaacaacataaagccgggaaggag
cgcggctcagagagcactccagcgggcagagcggcttctccggagagctgcgtgaaggcg
agtatgagcggttcgctttcacactcatccacatcttcggctaagcaggatggagcagct
tctcctgcggctagtgttagcgctgccggccgcagagcagcagcagcagcagcagcctcg
ggctccatggagacggcgcggcattacggtacgcggaagaagcgcggtggcgcgcgaggc
agcgctgcgtcgcggagtgtgaacggcgctgcgacctcctcctcctcctcctcttccgtc
agcaccaactcgccgtccagcaccggggccgccgcggtttccatagcgacagcacgcgcc
aactccaccacgtacaccgtgtccagcgcgagcaagtcggtcgcgctggataaagggacg
cccacgatcgcgctgcaccgactcccgagtcacatcgtggccagcatcgctcagggcagg
aacggcacgagcgtgtcggcgctcatccatcaagggcgcgtgaaccacggcaagaacttc
cagagcggcgaggacaagagcaaagcagatgttcagccagccagtgtgaactctgtcccg
agcgctgtgtgcatcgcggtgactcagtccaaacctcaacctcagcccacatcccaacct
caatccaaacctcaaactccagcccaaacccagttgcagcatcagtccgcacctcaacct
caaacacaatcccaacctcaacctcgacctgcagctccaccgcagaggatcacggctccg
cagctgatcgtcaggccgccgcaacagcaggcgacgatccagcttcctccaggatttact
atccctccaggcatggtgttggtgcggacggagctgggtcagttgatgatggttccacag
caagcactggctcaagcgcaggctcagagtgccctctcaccccgacccgctgctcccacc
acgacagctaccttcagagtcaccaccccacagtctcccgtctcgatccagacctctcgg
gccgctcctgctgtccagaataaagtggttcagtcccaaaccctgagtcctgctcctcag
acctgcactacttctacaactactactactactactgctactactacttctactactacg
gctactcctgcccttaccagggtgcctttggcagtaacaacaccccagcagcaccctgca
gctctggccccccaggggcccaccctggctccacccaccgcagctggccctgcccctgga
gcaactgtcatctcccaggaaatgcaagagaatgtgaaaaagtgtaagaacttcctggca
acattgatcaaactcgcatcccataattccccgtcgccggagacgtcacggaacgtgaaa
ggattggtgcaggaccttctggatgccaaaatcgaaccagaagaattcaccagccggctg
cagacggaactgaagtcatccccgcagccttacctggtgccttttctcaagaaaagccta
ccagcattgcgtttgtccctgttgaacagtcagcagtcgctcactcagcccctgcagtct
aagaccaccatatctccagcaggagccgtcaccggggctgttaccacgggcaacgccccc
cggcaacctaacagcaccattacaccgtcacagaatattaagaggacagggataatagga
gggcaggtccggatgcctgtggtcatcacgcagacggtgcgggcggcaggtgctgtaggg
aagagtccggtggtgcaggcagggaaaagccccttggcggtcagcgtgcagctctcagga
gctcagaagaacaaagtgaacgatcctgggggaggctcctttagagacgatgatgacatc
aatgacgttgcgtctatggccggagtgaacttgagtgaagaaagcgctcgtatcttagca
accaactcagagctggtgggcacacagatccgctcatgtaaagatgaggccttcctgccc
acgggcctactgcatcggcgcatactggagacggctaagaagttcggggtgacggaggtt
cctctggaggcggtaaacttcatcgctcacgccacacagacacggctgaggacggtgctg
gagaaagtatccttcatcgcccagcacaggctggactccagtaaggatgaggagtggcac
gagcagtcgtcagacgtccgctctcagctcaaattcttcgagcatttagagcggctggag
aaacagaggaaagacgagcaggagagagagattctcctcaaagcagccaaaagtcgctcg
aggcaggaggacccagagcaggctcgtttgaagcagaaggcaaaagagatgcagcagcag
gaactggcccagataaggcagagggacgcgaacctcacagctctcgctgcgatcggccca
cggaaaaaacgcaaagtggactcgcctggagcgacatcgggggctgaggtgtcggggagc
tccgtgggttctccagcctcatcgttgtcatcgtcgcgccagttccatcggcagcgaatc
acgcgcgtgaacctcagggacttcattttctacctggaacaggagcgagagacgagccga
tcgctcctgctgtaccgtgctctgctgaagtag
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