Neoarius graeffei (lesser salmon catfish): 132888133
Help
Entry
132888133 CDS
T10798
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
132888133
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ngra04990
]
132888133
Domain-containing proteins not elsewhere classified [BR:
ngra04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
132888133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_3
TSP1_spondin
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
132888133
NCBI-ProteinID:
XP_060780131
LinkDB
All DBs
Position
6:complement(86353453..86521519)
Genome browser
AA seq
960 aa
AA seq
DB search
MNRASCVSVAMVIALLWTNLSDSQFTLDHKKVAPRPVVEPRILDSSGSWGSWGPWGECSR
SCGGGVQEQSRPCLRISIPPATVYSSSQGPHTGHQDPSFVISALRPSVPAHHGNHRPFPD
AQRTHHTSRGETRKQKSEARPGRRRGGSTRISPGMYGYGKMPYVISSQRDSGQTMYSQRQ
PRSPSDYRYNSYRQQKYRNTQQSPPQNTPHSMSQQASWVPLHQPSSGLQSQENPHPPGTL
TSGFSQVSAPGRPHNPLLLPASSCSGVASQYKMCNMNSCPPASRNIRDIQCSSYNNHPFM
GRLYEWEPFNEVPGDHLCELNCRAVGYRFYVRQSARVIDGTPCGQNETAICVAGTCQSPG
CDELLGSGKVPDKCGVCGGDNTACRLISGLFQHSLSKVGYHKIVEIPQGATKINITEMVK
SQNYLALRSRSGRSIINGNWAIDRPGKYEGGGTMFTYRRPNEISSTAGESFLAEGPTNEI
LDVYMIYQQPNPRVHYEYVLPSENSVSTAPNTEEGNTVTGGAGYDQYGRRPSQEGHEGTG
GHRNLPHIPENQVPPRRHREHNWKLTGTTDCSASCGRGIRYTVFGCVHRVTHEHVSDSQC
DSTTKPSTQEEPCNVQPCPAFWDIGEWSECSKTCGLGMQHRQILCRQFYANRTLNVPAKR
CEHLERPESSSTCQLKICSEWQIHSEWSSCSMPCGVGQRTREVHCISNVGDIVEDEECNM
NLRPRDIENCDMGPCAKSWFYTHWGEQCSAECGFGVRSRSVVCLLNLVSSVPLEGCGTER
PPQAQPCNNGPCESRTEWFTGPWGQCSAECGTGSQQRTVVCMMKADDSYAVMPLYECSSL
DKPLSQQSCTVKACGAKWYYTDWSACSKTCEGGFRVREVRCLSDDMMPSEGCEERLKPED
KEECNPEVCVPQIDEKCKDKYFNCNVVVQARLCVYDYYKKACCASCARVAQRQSTHRSYR
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgaacagagcgtcatgtgtaagtgttgccatggttatcgccctgctttggacgaacctc
tctgactcccagttcacactggaccacaagaaggttgctcctagaccagtggtcgagcct
cgaattttggactcttctggatcgtggggttcttggggtccatggggtgaatgttcccgc
tcctgtggtggtggggtacaggaacaaagcaggccatgcttacgcatatccatccctcca
gccacagtttattcctccagtcagggtcctcacacggggcaccaggatccgagttttgtc
atatcagcattaaggccctctgttcctgcgcatcatggtaatcacaggcctttcccagat
gctcagaggacacaccataccagtcgtggggagacaagaaagcagaagagtgaagcacgg
cctgggaggcggcgaggaggcagcactcggatcagcccagggatgtacggttacgggaag
atgccatatgtgatctcctcacagagagattctggacaaaccatgtacagccagcgacag
cctcgctcaccatctgactacagatacaacagctacagacagcagaagtacagaaatact
cagcaaagtccacctcaaaatacccctcacagtatgagccagcaggcatcctgggttccc
ctccaccagcccagctcgggtctccagtctcaggagaatccacaccctcctggcacactg
acatcaggttttagccaagtttcggctccagggagacctcataacccgttactgctgcca
gcctcgtcctgctctggagttgccagccagtacaagatgtgcaacatgaattcttgtccc
cctgccagcaggaatatcagagacatccagtgttcctcgtataacaatcaccccttcatg
ggccgactctatgaatgggaacctttcaacgaagttcctggagatcacctgtgcgagctg
aactgccgtgcggttggatatcgtttctatgtgcgccagtcagctcgggtcattgacggg
acgccatgtggacagaacgagacggccatctgcgtggctgggacgtgtcagagtccagga
tgtgatgagctgttgggttcagggaaggtgccggataaatgtggcgtgtgtggcggggac
aacacggcatgtcggctgatttctggactgttccagcacagcctgtccaaagtgggttac
cacaagatcgtagagatcccacagggagccaccaaaatcaacatcactgagatggtcaag
agccaaaactacctcgctttgcggagtcgctctggacgttccattattaatggaaactgg
gccattgaccgacctggaaagtacgaaggaggagggacgatgttcacttacagacggccc
aatgagatcagcagcactgctggagagtcctttctagcagaaggaccaaccaatgagatc
ctggatgtctatatgatctaccagcagcccaatcctagagtgcactacgagtacgtcctt
ccgtctgagaactccgtcagcacggctccgaacacagaggagggtaacacagtgactggt
ggggcaggatacgatcagtacggcagaaggccgtctcaggaaggacatgaagggacaggt
gggcacaggaacctacctcacattcctgaaaaccaggtaccacctcgcaggcacagagaa
cacaactggaaactcacgggcacgacagactgcagcgcctcctgtggcagaggaatcagg
tacactgtgttcggctgtgtccatcgagtgactcacgagcatgtgtccgatagtcagtgt
gacagcacgactaaacccagcacacaggaggagccctgcaacgtccagccatgtcctgca
ttttgggatattggtgagtggtcggagtgcagtaagacatgtggcctcggcatgcagcac
cggcagattctgtgccgacagttttatgccaaccgcaccctcaacgtgcccgccaaacgc
tgtgaacacctggaacggcctgaaagcagcagcacctgtcagctgaagatctgcagcgag
tggcagattcactctgagtggagctcttgctccatgccctgcggtgtcggtcagagaaca
cgtgaagtgcactgcatcagtaacgtcggtgatattgttgaggatgaagagtgcaacatg
aatcttcgtccccgtgacattgagaactgtgacatggggccgtgtgctaagagctggttc
tacacacactggggtgagcagtgctctgcagagtgtggctttggcgtgcgaagccgcagt
gttgtgtgtctcttgaacctggtgagcagtgtgcctctggagggctgtggtacagagcgc
ccccctcaggctcaaccgtgtaacaacgggccgtgtgagagccgcacagaatggttcact
ggaccctggggacagtgctcggcagagtgtggaacaggcagccagcagaggacagtggtg
tgtatgatgaaggctgatgacagctatgcagtgatgccgctctatgaatgctcttctctg
gataaaccactcagccagcaaagctgcactgtcaaggcctgtggagccaagtggtactac
actgactggagtgcatgttcaaagacatgtgaggggggattccgtgtccgagaggtgcgc
tgtctctctgacgatatgatgccaagcgaaggatgtgaagaacggctgaaaccagaggac
aaagaggagtgcaaccccgaagtgtgtgttccacagattgatgaaaagtgtaaagacaaa
tatttcaactgcaacgtggtggtccaggcccgcctgtgtgtgtacgattactataagaag
gcgtgctgtgcgtcatgtgcgcgtgtggcgcagagacagtcgacacacaggagctacaga
tag
DBGET
integrated database retrieval system
