Neoarius graeffei (lesser salmon catfish): 132888147
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Entry
132888147 CDS
T10798
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132888147 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132888147 (dhx36)
03012 Translation factors [BR:
ngra03012
]
132888147 (dhx36)
Enzymes [BR:
ngra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132888147 (dhx36)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
132888147 (dhx36)
Translation factors [BR:
ngra03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
132888147 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
AAA_16
T2SSE
NB-ARC
PhoH
TsaE
AAA_7
Motif
Other DBs
NCBI-GeneID:
132888147
NCBI-ProteinID:
XP_060780155
LinkDB
All DBs
Position
6:complement(88857780..89011733)
Genome browser
AA seq
1001 aa
AA seq
DB search
MSYGYGRGRGRRGGGERWSSDWEARDEQPRGGGGRGRHPPHLKGREIGLWYAKWGGVKRA
EAERKSRAVVQMDESREQHITQLLNSVQREPSHDYAPSVPPYRQVKPEPSGHSYFDGDGP
PEEPQETVKVAKIESVKEEGAEIKTDIKEAQHVDRDLEYLVQEINRKPSLDEDLKRDLQS
KRQNSRYLEMLAFREKLPSYSMREELVKLIQANRMVVVSGETGCGKTTQVTQFILDDYIQ
RGMGSLCRVVCTQPRRISAISVAERVAAERAESVGEGKSCGYQIRLQSRLPRKQGSVLYC
TTGIILQWLRSDPCLSSISHLVLDEIHERSLHSDVLLTIVKDLLNHRDDLKVVLMSATLN
AEKFSKYFDNCPMIHIPGHTFPVKEYLLEDVVEMLRFRPQQQQDRRPRFRRGFMNGQNVR
PEKQEKEAEYKESWPCFARTLKDRFSDSTVDALEVMDDDDKINLELIVALIRHIVLNEDD
GAILVFLPGWDNISSLNDLLMADQMFKSDKFVIIPLHSLMPTVNQTQVFKRLPPGVRKIV
IATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMSAEWVSVANAKQRKGRAGRVSP
GKCYHLYNSLRASLLDDYQLPEIQRTPLEELCLQIKILKLGSIASFLRKTLDPPSDRAIE
LAITHLMDLNALDRNEELTPLGFHLARLPVEPHIGKMILFGALLACLDPVLTIAASLSFK
DPFSIPLGKEKIADQRRKTLSKNTKSDHLTVVNAFRGWEEAKRRGYRYEREYCWDNFLSA
NTLQMLQNMKGQFAEHLLAAGFVSSKDPKHSGANINSENEKLLKAVIVAGLYPKVAKICP
SHHTKRPIPAKVYTKADGKVCIHPKSVNSEETQFHYTWLIYHLKMRTTSIFLYDCTEVSP
FSLLFFGGDISIQKDQEQETIAVDEWIVFQSPARIAHLVKNLKKELDLLLEDKIKQPRPV
DWSDRTSEDCAVISAIIDLITTQESATSSQEPYRRSHKHWC
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggatacgggagaggaagaggcaggagaggaggaggagagcggtggagctcc
gactgggaagcccgggatgagcagcctcgaggcggcggaggccgcgggagacacccgccg
cacctgaaggggagagagatcggactgtggtacgccaagtgggggggagtgaagcgggca
gaggccgagaggaagtcgagagctgtagttcagatggacgagtcgagagagcagcacatc
acacagctgctcaattcagtccagagagaaccatcacatgactacgcgccgtccgtccca
ccgtaccggcaggtgaaaccagaaccgagtggccacagctactttgacggcgatggtcct
ccagaagagccgcaggaaacggtaaaagtggcgaaaatcgagtcggtcaaggaagagggg
gcggagataaagacggacataaaggaggcgcagcacgtggaccgagatctggaatacctg
gtgcaggaaattaaccgaaagccttcactggatgaagatctgaaacgtgaccttcagagc
aaaagacagaattcaagatacctggaaatgctggcgtttcgagagaagctgccttcctac
agcatgagagaggagctggtgaagctgatccaggcaaaccgcatggtggtggtgagcgga
gaaaccggctgcggcaaaaccacgcaggtcacgcagtttatcctggacgattacatccag
cgtggcatgggctcgctctgcagggtggtgtgcacgcagccccgccgcatcagcgccata
tcggtggccgagagggtggcagcggagagggcggagtctgtcggcgaagggaagtcatgc
ggatatcagatccgtctgcagagccggttgccacggaaacaaggctcggtgctgtattgt
acgacgggaattattcttcagtggctgcgctcagatccgtgtttgtccagcatcagtcac
ctggtcctagatgagatccacgagcgcagcctgcactcggacgtcctcctcaccatcgtc
aaggacctgctgaaccacagagacgacctgaaggtcgtgctcatgagcgccacgctgaac
gccgagaagttcagcaagtacttcgataactgccccatgatccacatcccgggtcacacc
ttccctgtgaaagagtacctgctggaggacgtggtcgagatgctcaggttccggccgcag
cagcagcaggatcgtcgtcctcgcttcaggagaggcttcatgaacggccagaacgtgcgg
cctgagaaacaggagaaagaagcggagtacaaggagagctggccgtgtttcgctcgcaca
ctcaaagacaggttctccgacagcaccgtcgacgccctggaggtgatggacgacgacgac
aagatcaacctggagctgatcgtagcactcatccgccacatcgtgctcaacgaagatgac
ggagccatcttggtgttcctgccaggctgggacaacatcagcagcctgaatgatctgctc
atggccgaccagatgtttaaatccgataagtttgtgatcattccactgcactcgctgatg
cctacagtcaaccagacacaggtttttaaaaggctacctcctggagttcggaagattgtg
attgctacaaacatcgcagaaaccagtattactatagatgacgtggtgttcgtgatcgat
ggagggaaaattaaagaaactcacttcgacacccagaacaacatcagcacaatgagcgca
gaatgggtgagcgtcgccaacgccaagcagaggaaggggcgggctggcagggtgtctcca
ggtaaatgttaccacctgtataacagtctgagggcaagtctgctggacgactaccagctc
cctgagatccagcgcacaccgctcgaggagctctgcctacagattaagatcctgaaattg
ggctccatcgcatcattcctgaggaagactctggaccctccgtcagacagagccatcgaa
ctggccatcactcacctaatggatctgaacgcgttggaccggaacgaggagttgactccg
ttgggattccatctggcccgtttgcctgtggagccgcacatcggaaagatgattctgttc
ggagctctgctcgcctgcctggaccctgtgctcactatagcggctagcctgagctttaaa
gacccgttctccataccactggggaaggaaaagatcgcagaccaaagaagaaaaaccctg
tccaagaacaccaagagtgatcacctgactgtcgtcaacgccttccggggctgggaggaa
gcaaagcggcggggctacaggtacgagcgggaatactgctgggacaacttcctctcagcc
aacacactacagatgttacagaatatgaaaggacagtttgcggagcatctcctggccgct
gggtttgtgagcagtaaagacccaaaacattccggtgccaacatcaactccgaaaatgag
aagctcctgaaggctgtgatcgtagccggcttgtaccccaaagtggccaagatctgcccg
agccaccacaccaagagacccataccagcaaaggtgtacactaaggctgacgggaaggtc
tgcatccatcctaaatctgtcaactcagaggagacacagttccactacacctggctcatc
tatcacttgaagatgagaactaccagtatctttctgtatgactgtactgaggtgtctccg
ttctcgctcctcttcttcggtggtgatatctccatccagaaggaccaggagcaggagacc
atcgcagtggacgaatggatcgtcttccagtctcccgctcgcatcgctcacctggtcaag
aacttgaagaaggaactggatctgctgctggaggacaaaatcaagcagccacgcccggtg
gactggagcgaccgcacctcggaagactgcgccgtcatctcggcaatcatcgacctcatc
accacgcaggagagcgccacgtcttcgcaagagccgtaccggagaagccacaagcactgg
tgctag
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integrated database retrieval system
