Neoarius graeffei (lesser salmon catfish): 132888229
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Entry
132888229 CDS
T10798
Symbol
afg2b
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1 isoform X1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngra03009
]
132888229 (afg2b)
Enzymes [BR:
ngra01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
132888229 (afg2b)
Ribosome biogenesis [BR:
ngra03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
132888229 (afg2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_33
DUF815
bpMoxR
AAA_2
AAA_7
TIP49
AAA_25
Viral_helicase1
NTPase_1
Mg_chelatase
RNA_helicase
Rad17
AAA_lid_PRS2_C
Vps4_C
ABC_tran
AAA_19
TsaE
NACHT
nSTAND3
AAA_30
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
132888229
NCBI-ProteinID:
XP_060780284
LinkDB
All DBs
Position
6:complement(106521103..106550206)
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AA seq
774 aa
AA seq
DB search
MFYICILVRAMPLDLLFLPPEHSDVGTQRCRLGPAVMDDLGLRLGSPVLVTLPGRVSCLC
TAWPRPDLADAYLQLDPTCSSPNLHPRELHGLRLRAECLRALKCQSVKRLRVTALVHSSE
YKRRTSAQAVGALAAELLRGLYVHEKHLVNVSHAGTPIHFLQVDSVNSGSHKVGRVTSET
RLDVVSVQTVETHQRWAREGSAVPLGGLEEVQATLKEMVTLPLRYPNSTQRVGVATGHGA
LLVGPPGVGKTQLVRSVARDVQAALVMVSGPVVVGSRPGESEENLRAAFTRASEAARDEP
CVLFIDEIDALCPKRSSSTGTPENRLVAQLLTLMDGISSDDRFVIIGATNRPDALDPALR
RPGRFDREIVVGVPTLQQRYRVLQCVCRSIPLDPSVDLNSIAEMTSGYVGADLSALSREA
ALQAILHSTQDGAGDCGQSGVEDDKVRMEHFVKALRLVPPSCLRSSVGVAEFKPVSWEQI
GGLEEVKNKLRQSVEWPMKFPEALVRVGVCRARGVLLYGPPGCAKTTLVKAAASSSHCSF
LTLSGAELYSPYVGDSERALAQLFHQARACSPSIVFLDEIDSLVGCRDDRGSCRGSSVQA
QVLSVLLNELDGVGFKPAERRETGQSEGYKGRTRRDRRMQLQELCNQDVMIVAATNRPDM
LDSALLRPGRFDHIIYVPPPDLQARLAILQLHTEKMPMSSDVCLEDLAVQTDLFSGADLE
NLCKEAALLALHEEGMSVSTVQQKHFQKVLQNFQPSISSQQLLQYQQLFRCSCS
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgttttacatttgtattttagtcagagcaatgccgctggatctcctgtttctcccgccg
gagcactcagatgtcggtacacagcgatgccgtctgggtccagcggtgatggatgacctc
ggtctgcgtcttggttctccggtgctggtgacgctgccaggcagagtttcctgtctctgt
acagcgtggccacgccccgacctggccgacgcctacctgcagctggaccccacatgctcc
tcgccgaacctccacccacgtgagcttcatggactccgcctcagggcggagtgtctcagg
gctctgaaatgtcagagtgtgaagcgtctgcgtgtgactgcgctggtgcacagcagcgag
tataaacgtaggacgtctgcgcaggcggtgggagcactggctgcagagctgctcagagga
ctatacgtccacgagaagcacctggtgaacgtctcacatgcagggacaccgattcacttc
ctgcaggtggacagtgtgaactcgggctctcataaagtgggacgcgtgacgtccgagact
cgtctggacgtggtgtcagttcagacggtggaaacgcaccagcgctgggcgcgtgagggt
tctgctgtgcctttgggtggactggaggaggttcaagccacgctgaaggagatggtgaca
ctcccacttcgttacccaaacagcacacagcgtgtgggcgtggcaacggggcatggcgca
ctgctggtgggacctccgggtgtggggaagacacagctggtgcgcagcgtggcgcgggac
gtgcaggcggcgctggtgatggtgagtgggccagtggtggtggggtcacgacccggagag
agcgaggagaacctgcgtgctgcgtttactcgggcctcggaagcagcgcgagatgaaccg
tgtgtgctcttcatcgatgagatcgacgcactgtgtccgaaacggagctccagcaccgga
accccggagaaccgactcgtcgctcagctcctcaccctcatggacggaatcagcagcgac
gacaggttcgtcatcattggagccaccaaccggccggacgcccttgacccggcactcagg
aggcccggccgcttcgacagagagatagttgtgggtgttcccactctgcagcagaggtac
cgggttctgcagtgtgtgtgtcgcagtattccgctcgacccgagtgtggatctgaactcc
atcgctgagatgacgagtggatatgtgggggcggatctgagcgcgctcagtagagaggca
gcactgcaggccatactgcactctacacaggatggagctggagattgcggccaatcagga
gtcgaggatgataaagtgagaatggagcactttgtgaaagcgttgcgattggtcccgccc
tcctgcctgaggagcagtgtgggcgtggctgagttcaaacctgtgagctgggagcaaatc
ggaggactggaggaagtaaagaataaactcagacagagtgtggagtggccgatgaagttc
cccgaggccttggtgcgtgtaggtgtgtgtcgtgcgcggggtgtgttactgtacgggccg
ccgggctgcgccaagaccacactggtgaaagcagcagcatcttcatcacactgcagcttc
ctcacgctgagtggggcggagctttactctccctacgtgggggactcggagagggcgctc
gctcagctgttccatcaggcgcgggcgtgttctccctccattgtgttcctggacgagatt
gacagcttggtgggttgccgtgacgacagaggcagttgccgtggcagcagtgtacaggct
caggtgttatcagtcctgctgaatgagttagacggtgtgggctttaaacctgctgagaga
cgagaaacgggacagagtgaggggtacaaagggagaacacgcagagaccgacggatgcag
ctccaggagttgtgtaatcaggacgtgatgattgttgctgccacgaacaggccagacatg
ttggacagcgctctgctccgcccaggccgcttcgaccacatcatatacgtccccccacct
gacctacaagctcgtctggccatcctgcagctccacacagagaaaatgccgatgagttct
gatgtgtgtttggaggatctggcagttcaaacagacctgttctctggagcagacctggag
aacctctgcaaggaggcggctctgttagctcttcatgaagaagggatgagtgtatccacg
gtgcagcagaaacacttccagaaggttctacagaattttcaaccatcaatcagctcacag
cagctcctgcagtaccaacagctcttcagatgcagctgcagttag
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