Neoarius graeffei (lesser salmon catfish): 132888239
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Entry
132888239 CDS
T10798
Symbol
sema6dl
Name
(RefSeq) LOW QUALITY PROTEIN: sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like
KO
K06842
semaphorin 6
Organism
ngra Neoarius graeffei (lesser salmon catfish)
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GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
132888239
NCBI-ProteinID:
XP_060780299
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All DBs
Position
6:complement(107457597..107525891)
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AA seq
1049 aa
AA seq
DB search
MWCVIFPKLLLLLLLLLRTHAISFPEDIAPLDIVDRHYSRQYPVFRGRPSGNESQHRLDF
QLMTRIQDTLFIAGRDQVYLVSLRESYRNDITPYRKLTWRSSQADRETCALKGKHRDECH
NFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEISGLARCPFDAKQTNVALFS
DGKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAVDYGNYVYFFFRE
IAAEHNNLGRAVYSRVARVCKSDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDVLQS
LTNIITINGVPSVVGVFTTQLNSIPGSAVCAFSLPDIEKVFEGRFKEQKTPDSVWTPVPD
DRLPRPRPGCCAGHGSAESYRSSVEFPDETLQFIKLHPLMDSAVPSIRDEPWITKTRVRY
RLTALAVDNAAGPYKNYTVVFIGSEAGVVLKVLAKTTGFSLNESVLLEEIDVFNQAKCLS
NSEDERHVLSFHLDKNTHTLYVAFSSCVVRIPLSRCERHRTCHKACIASRDPYCGWMPHG
ACERIPAGGDSGFEQDVEFGDTGRLGDCHEFMTTASAPGFKSYGDATSAKQEKPVRSVTP
SSTSDPKHSPHTPPSPPPQLLNTQKSVHHDDSETSRSFDRVMEGIWEIQTADSNQLVHMN
ILITCVLAAFLLGAFIAGAVVYCYRDVFLHKKTRKIHKVPHGKDEESAPSRTDSNGSFTK
LDGLFESPLKEFPSAMEEARIFFSGDKDEKNPESKTVILSRQNPELAALPTPESTPVLHQ
KGLQPNKNQWERAQGKTCVSRKEAPPKSPQNPNIPSAVVLPNATHEKPTPSSDTSSVTSV
HKEQQRSVDARNTLNELLKHLNEANEAETINANPKAIMADTPRPRPHLMLEPLENLAEIP
PKVPSREASLYSPTSYSPPSSYSASSYSPSSSLPRHSPTKRVDVPSVPTSPTGQMGTLDR
QRFHRGSSAHRHAGSSSAVVARHSSFNRGALAPPTPPSRMDSQGISRQHSGYGSLPRTSV
KRTVSLRPDVPPKPGGFVSQTRPVNKYSY
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgtgtaatatttcccaagctgctgcttctgctgctgctgttgttgcgaactcat
gccatcagtttccccgaggacatcgcaccactggacatcgtggacagacattattccaga
cagtatccggttttccgaggccggccgtctggaaacgaatcccaacatcggctggacttt
cagctgatgaccaggatccaggacacactgttcatcgccggcagggaccaggtgtatttg
gtgagtctgagggagtcgtacaggaatgacatcactccctacaggaagctgacgtggagg
tcgagtcaggccgaccgggagacgtgcgctctcaagggcaagcacagggatgagtgccat
aactttattaaagttttggttcccagaaatgatgaccttgtcttcatctgcggcaccaat
ggctttaaccctatgtgccgttactacaggctggataatctggagtttgatggagaggag
atcagcggtttggctcggtgtccatttgacgctaaacagaccaacgtagcgctcttctca
gatgggaagctgtactcagcaacagtagctgatttcctggcgagtgatgcagtgatttat
cgcagtatgggcgacggctcggctctgaggaccattaaatacgactccaaatggctgaag
gagcctcacttcctgcacgcagtggattatgggaactatgtgtactttttcttcagagag
atcgcggcggaacacaacaacctggggcgggcggtgtactcccgtgtggcgcgggtgtgt
aagagcgatgtgggcggttctcagcgtgttctggagaaacactggacatcgtttgtgaag
gcgagactgaactgctccgtccctggagaatccttcttctacttcgacgttctgcagtcg
ctcactaacatcatcaccatcaacggggttccgtctgtggtgggtgtgttcactactcaa
ctcaacagtattccaggctcggctgtgtgtgcgttctctcttccggatattgagaaagtg
tttgagggacgttttaaagagcagaaaactccggactcggtgtggactcctgttcctgac
gacagactgcccagaccgcggccgggatgctgtgctggtcatggatcagcagaatcttac
agaagttctgtcgagtttccagatgaaacactgcagtttataaagttacacccactgatg
gacagcgctgtgccctccatccgagatgagccctggatcaccaagaccagagtcaggtac
cgcttgacagctctggcagtggataatgcagcaggtccctataagaactacacggtggtg
tttattggctctgaggcgggcgtggttctgaaggttctggcgaagaccacggggttttca
ttaaacgagagcgttctgctggaggagatcgatgtgtttaatcaggccaagtgtctgtct
aacagtgaggacgagaggcatgtcctctccttccacttggacaaaaacacacacacactg
tacgtggccttctccagctgtgtggtgcgaatcccgctgagccgctgtgagagacaccga
acctgccacaaggcttgtattgcatccagagatccatactgtggttggatgccacatggg
gcttgtgagaggattccagcaggaggagacagtggctttgagcaggatgtggagttcggg
gatacggggcgtctcggtgactgtcatgagtttatgactaccgcttcagcgccaggtttc
aaatcatacggcgacgcaacttctgcaaaacaggaaaagccggtgcggtcagtcacgccg
tcctccacttcagaccctaaacattccccacacactcctccctctcctcctcctcaactc
ctcaacacgcagaaatctgttcaccatgacgattcggaaacttccagatcatttgaccgg
gtgatggagggtatctgggagatccagacggccgattccaaccagctggtgcacatgaac
atcctgatcacgtgtgtcttggctgcattcctgttgggggcgttcatcgccggcgctgtg
gtctactgctaccgagacgtcttcctgcataagaagacacgcaaaatccacaaagtgccg
cacggtaaagatgaggaatcggcaccatcacgcacagactctaacgggagcttcaccaag
ctggacggcctcttcgaaagtccgctgaaagaatttcccagcgccatggaagaggccagg
atcttcttcagcggagacaaagatgaaaagaacccagaatccaagactgtcatcctcagc
aggcaaaatccagagctggcagcactgcccacgcccgagtcgacgccggtgctccaccag
aaggggctccagccgaacaagaaccagtgggaaagggcacaagggaaaacgtgtgtgtct
cggaaagaggctccacccaaaagtccacaaaaccccaacatcccaagtgccgtcgtgctt
ccaaacgcaacgcatgagaaacccactccaagcagcgacacgagcagcgtgacgtcggtc
cataaagagcaacagcgttccgtagacgctagaaacacactgaatgagcttctgaagcat
cttaatgaggctaacgaggcggagacaataaatgccaatcctaaagccatcatggccgac
acacctcgtccccgcccacacctcatgctcgagcccctggagaacttagcagaaatccct
cctaaagtcccaagtcgggaagcatcactttattccccgacatcctattccccgccctca
tcctactcagcttcgtcctattcgccgtcgtcctcgttacccagacacagtcccactaaa
cgcgtggacgtcccgtctgtgcccacgtcacccacaggacaaatggggaccctcgacagg
caacgtttccaccgtggcagctccgcccaccgccatgccggatcgtccagtgccgtggtg
gcacgccactccagtttcaaccgaggtgcactggctccgcccacaccgccctccaggatg
gactcgcagggcatttcgaggcagcacagcggatacggatcgcttcctcggacttctgtt
aaacgaacagtgtcgttaagacctgatgttccgcccaaaccaggaggatttgtgtcacaa
acaaggcccgtaaacaaatacagttactga
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