Neoarius graeffei (lesser salmon catfish): 132888773
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Entry
132888773 CDS
T10798
Name
(RefSeq) ras-related protein Rab-33B isoform X1
KO
K07920
Ras-related protein Rab-33B
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132888773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132888773
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132888773
04031 GTP-binding proteins [BR:
ngra04031
]
132888773
Membrane trafficking [BR:
ngra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
132888773
Others
Specific organelles associated proteins
Auto phagosome
132888773
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
132888773
GTP-binding proteins [BR:
ngra04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
132888773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
GTP_EFTU
SRPRB
G-alpha
MMR_HSR1
ATP_bind_1
AAA_22
PduV-EutP
AAA_16
zf-TRM13_CCCH
NACHT
Motif
Other DBs
NCBI-GeneID:
132888773
NCBI-ProteinID:
XP_060780849
LinkDB
All DBs
Position
7:complement(76558677..76567159)
Genome browser
AA seq
214 aa
AA seq
DB search
MDSCEFWVPVVRRTCKIIVLGDAGVGKTSLTQLYCTGHFPEKTDSTIGVDFRERLLHVGG
EKIKVQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDVTNVASFRSLPLWMAECQQHLLGP
DVPRVLVANKADLVTLSVASTIEQAQHLAEVHSMPFYLYSAKGGSREQVDAIFSKLVQQI
NKQRGKRAEAVKSFKLAPKANAEEEKKKKWTCNC
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggactcctgcgagttttgggtcccggttgtacgccgcacctgtaaaataatcgtgctc
ggagacgccggtgtgggaaagacgagtctgactcagctgtactgcaccggacactttccc
gagaaaaccgactccaccatcggcgtggacttccgggagagactgctgcacgtggggggc
gagaagatcaaggtgcagttgtgggacacggcaggtcaggagcgttttcggaagagcatg
gtacagcactactaccgcaacgtacacgctgtcgtctttgtctacgacgtcactaatgtg
gcctcgttccgcagtctgcccctctggatggcggaatgtcagcagcacttgcttggacca
gatgtaccccgcgtgctcgtggcaaacaaggccgacttggtgaccttgagcgtggcctca
accattgagcaagcacagcacttagctgaggtccactcaatgcccttctacctctattca
gctaaaggtggcagcagagagcaagtggatgccatcttcagcaaactggtacagcagatc
aacaagcagagagggaaacgagcagaggcagtcaagagttttaaacttgctccaaaagcc
aatgccgaggaagagaaaaagaagaaatggacctgcaactgctga
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integrated database retrieval system
