Neoarius graeffei (lesser salmon catfish): 132889025
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Entry
132889025 CDS
T10798
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04137
Mitophagy - animal
ngra04140
Autophagy - animal
ngra04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132889025 (hif1aa)
04137 Mitophagy - animal
132889025 (hif1aa)
04148 Efferocytosis
132889025 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132889025 (hif1aa)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
132889025 (hif1aa)
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
132889025
NCBI-ProteinID:
XP_060781127
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Position
7:3361565..3412803
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AA seq
598 aa
AA seq
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MTSADTAEKKRQSCERRKARCRDAARCRRVKETEVFNQLANQLPLHHSITESLDKASIIR
LTLSYLHLRSALNAVMMGEQSELDTQWSASCLKALDGFLMILSQDGDVVYASETVSKCLG
IPQIDLSGQSVFDFTHPCDHEEIREMLVNRTGSCKKMRDEQSCLLRMKCTLTNRGRTVNL
RSATWKVLHCSGHVRVECTQSSVCEEGSTPASYLVLICEPIPHPANIEVLLDSRTFLSKH
ALNMRFSYCDERVTHLLGYEPEDLLQRSVYDFYHALDSDSLTKTHHTLFVKGQACTGQYR
MLVKGGGFVWVKTQATIIYSNKNSQPQCVICLNYVLSSVEEPELVLSLHQSVIKQEKEDE
SGTERETRSQEAVTRINEDKKEERRDGETELEAEADVTLDFPNAERSVLKDAPLYNDVML
PSTSILSPLSLPTEPPCATLPQLEDFPFPSSSPAPVSSTHSSTQDVDDLELEMLAPYISM
DNDHQLHMDTRTDGPENLDSTQKNTGTHTQHREQLDEDLSSAGQPSHKRKFETTTLSHVT
GLVVTDSPPVKRSKVTVSEAHPPATVPETLTILLLPSDMLNQIMVGGAIIKPLPHTTH
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgcagacacagccgaaaagaaaagacagagctgcgagcggaggaaggcgagg
tgtcgtgatgcggcacgatgtaggcgggtgaaggagactgaggtgtttaatcagctggcc
aatcagcttcctctccatcacagcatcactgagagcctcgataaagcctcgatcatccgt
ctcacgctgagctacctgcacctgcgctcggctctcaacgcagtgatgatgggcgagcag
tccgagttggacactcagtggagcgcttcttgtctgaaggccctcgacggcttcctcatg
attctgtctcaggatggagacgttgtttatgcatcagaaaccgtcagcaagtgtctggga
atccctcagatcgatctgtcaggacagagtgtgtttgatttcactcacccatgtgaccat
gaagagatcagagagatgctggtcaacagaacaggttcctgtaagaaaatgagggatgag
cagagttgcttgttgcggatgaagtgcaccctgaccaatagggggcgcactgtcaacctc
agatctgctacatggaaggttctccactgttccggtcacgtccgtgtggagtgcacacag
agcagtgtgtgtgaagagggcagcacgccagcgtcatacctggtgctgatctgtgagccg
atcccacatccagccaacatcgaggttcttctagattccagaactttcctgagcaaacat
gcgctcaacatgcgcttctcctactgcgatgaacgggtcacacacttattgggttatgag
cctgaggatctccttcaacgttctgtgtacgatttttatcacgctctggactcggacagt
ctcaccaagacacaccacaccttgtttgtgaagggccaggcctgtacaggtcagtaccgg
atgctggtgaagggtggaggctttgtgtgggtcaagactcaggccaccatcatttacagc
aacaaaaattctcaaccgcagtgcgtcatctgcctcaactacgtcctcagcagtgttgaa
gaacccgagctcgttctctctctccatcagtccgtgataaagcaggaaaaggaggatgag
agtgggacagagagagagacacggagccaggaagcagtgactcggataaacgaggacaag
aaagaggagaggagagacggagaaacggagctagaggctgaggctgacgtcacactggac
ttccctaacgcagaaaggtcagtgctcaaagacgctcctctctacaatgacgtcatgctg
ccctccaccagcatcctttcacctctgtcgctgcccactgaaccaccctgtgccaccctg
ccccagctggaggacttccccttcccatcatcctcccctgctccagtctcgtccactcac
agctccactcaggatgtagatgatctggagttggagatgttggctccatatatctccatg
gataatgatcatcagctccacatggatacacgcacggatggtccggagaatcttgattcc
acccagaaaaacaccggaacacacacacagcacagagaacagctggatgaagatctgtct
tccgcaggtcagccaagccataagagaaaatttgaaactactactctgtctcatgtcaca
gggctggtggtaacagactcccctccggtcaagaggtcaaaggtcacggtgtcggaggct
catccaccagccaccgtgccagaaactctgaccatcctgctgctcccctcagacatgtta
aaccagataatggtaggaggagccatcattaagcccctcccacacaccactcattag
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