Neoarius graeffei (lesser salmon catfish): 132889140
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Entry
132889140 CDS
T10798
Symbol
itga9
Name
(RefSeq) integrin alpha-9 isoform X1
KO
K06585
integrin alpha 9
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04510
Focal adhesion
ngra04512
ECM-receptor interaction
ngra04514
Cell adhesion molecules
ngra04810
Regulation of actin cytoskeleton
ngra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132889140 (itga9)
04514 Cell adhesion molecules
132889140 (itga9)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132889140 (itga9)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132889140 (itga9)
04810 Regulation of actin cytoskeleton
132889140 (itga9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngra04515
]
132889140 (itga9)
Cell adhesion molecules [BR:
ngra04515
]
Integrins
Integrin alpha subunits
132889140 (itga9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
Integrin_alpha
FG-GAP_2
SARA
Motif
Other DBs
NCBI-GeneID:
132889140
NCBI-ProteinID:
XP_060781331
LinkDB
All DBs
Position
7:18234575..18493844
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AA seq
1032 aa
AA seq
DB search
MYCKRIGLLTWKSGVLDVFCVCLYFSFVYAYNIDLEHPLVFRGPNATFFGYSVLEHFHDN
TRWILVGAPQANSSFSKSVHSPGAVFKCRIHSNPERRCTEIDLGRGNKKRESCGKTCQGD
RDDEWMGVSLARQDKPNGRVLACAHRWKNVYYESEHILPHGYCSVIPPTLQGRTQALIPC
YEDHKKMYGEEHGSCQAGIAGAFMEELVVMGAPGSYYWTGTVKVFNITSNTQYSLNKNQL
SSQRYSYLGDAVTAGHFSSPTSIDIAAGAPRDGGGGKVYVFRIDSVSLVKVFQASGKMMG
SYFGSSLCAVDLNADGLSDLLVGAPMFSEVRDEGQVSVYISRGNGVMEEVMLLNGDNAYN
AHFGECISAIGDIDDDGYQDVAIGAPKEDDFGGAVYIYHGDAKALVNKYSMRFSGRSINP
TIQMFGQSISGNVDMDGNGYPDVTIGAFMADSVVLLRSKPVITVDVSIFLPAAINITVPQ
CHENPQHLNCFNVTVCMRFHGKLVPGQIELLYNLTADADKRYKGLSSRVYFTLGGEQTGV
VGQNFNLRINQQECHHYTTYVRKEVKDVFAAITFEASYSLGKHVLDVHHVHELASLSPVL
RWRKGEKITARNETWFEKNCLSDDCAADLKLHGKLLLSGHHIRPHLALGGVKNVSLNITI
INAGDDAYDTNIYLNFSREVHYINFLQREEKGISCELIQLDFLKCSVGFPFMRAQTKYHL
SVLFDTSHLSGENETLLFLVHARSANPEHENKLHDNTLELSIPLMHEVDTAVTGVVTPSS
FVYGNSVDSSRFIQLEHMECNFQPLNFTFQVLNNGPSRLPGSTVDIRIPNRLAGNGANMF
HIIDTQVAEGRGNCTWHRNPTPCIIPQDRESIFHTIFAFFTKSGRKVLDCDRPGRACLTI
SCSLGSQAKDEATVIDVQMLLNTETLKKDSSSVIQFVTRSHVQVDSRAMEVPTGLPEDIS
LVFEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRHYREIIEAEKNRKD
SDESWDWVQRSE
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtactgcaagaggatcggactattaacgtggaaaagcggagtgctggatgttttttgc
gtgtgtttgtacttttcttttgtttatgcttacaatattgacctggaacaccctctggtt
ttccgtggaccaaatgcgacgttttttggctactcggttctggagcacttccatgataac
acacgatggattttggttggggctcctcaggcaaattcatccttcagtaaatctgttcac
tctcctggagctgtgtttaagtgccgtatacacagcaacccagagcgccgctgtacagag
atcgacctgggcagaggtaacaagaaaagggagtcttgtggaaagacatgccaaggggac
agggatgatgagtggatgggggtcagtctggcgagacaagacaaacccaatggaagagtt
ctggcctgtgcacatcgctggaaaaatgtgtactacgaatcagagcacatcctaccgcat
ggctactgctctgtgatcccaccaacattacagggcaggacccaggctctcattccttgt
tatgaagatcataagaagatgtatggggaggaacatggctcatgccaggcaggaatcgca
ggagctttcatggaggagctggtggtcatgggagcacctggatcatactactggactgga
acagtgaaagtgttcaatatcacctccaatactcaatacagcctcaacaaaaatcagctg
agttctcaaagatacagttacctgggcgatgcagtgacagctggtcacttctcatcacct
acttccatcgatattgctgctggtgcacctcgggatggtggtggtggaaaagtttacgtc
ttccggattgacagcgtctctcttgtaaaggtctttcaagcctcagggaaaatgatgggc
tcttactttggctcctcactgtgtgcagttgacctgaacgcagatggactctcagacctg
ctggtcggggcaccaatgttcagtgaggttcgggatgaaggccaggtgtctgtttacatc
agcaggggcaatggggtgatggaggaggtgatgcttttgaatggggacaatgcatacaat
gctcatttcggagagtgtatcagtgctattggggatatcgatgatgacgggtaccaagat
gtggcaataggagctcccaaagaagatgactttgggggtgcagtttacatctatcatggt
gatgctaaagcattagtcaacaagtactcaatgaggttctctggacgaagcatcaatcca
accatccaaatgtttggccagtcaatatctggcaacgtggacatggacggaaacggatat
ccagatgtgacaatcggtgcattcatggcagacagtgtggtgttactaagatctaaaccg
gtaatcacagtggatgtgtccatctttctgccggccgccataaacatcaccgtgcctcag
tgtcatgaaaatccacagcatctaaactgctttaatgtcacagtctgtatgcgcttccat
gggaaacttgtgcctggacaaatagagctgctgtacaatctaacagcggatgcagataag
cgatacaaaggcttatcatcacgagtctatttcacacttggtggagagcagactggtgtt
gtgggtcagaacttcaaccttcgcatcaaccagcaggagtgccatcactacacaacctat
gtacggaaagaagtgaaggatgtgtttgcagccataacgtttgaggcatcatacagcctg
ggcaagcatgtgctggacgtacatcatgtgcatgagcttgcttcactctctcctgtactg
cgctggaggaaaggagagaagattacagcaaggaatgagacttggtttgagaagaactgt
ctgtccgatgactgtgctgctgacctgaagctacatggcaaactgctgctttcaggacat
cacatcaggcctcaccttgctctcggaggggtgaaaaatgtctctctcaacataaccatt
atcaatgctggagatgatgcttatgacaccaacatctacctaaatttttccagggaggtt
cactacataaactttctgcagagggaagaaaagggcatttcctgtgaactgattcagctg
gacttcctcaaatgcagtgttggatttcctttcatgagagcccagactaagtatcatctg
tctgtactttttgacacaagtcatctgtctggtgaaaatgaaacactgttatttttagta
catgccaggagcgctaacccagaacatgagaacaaattgcatgataacacactggagctg
tccatcccgctgatgcatgaagtggacacagctgtcactggtgtggttactccttcctca
tttgtgtatggaaattctgttgactcttctcgctttattcagctggaacacatggagtgc
aacttccagcctctcaactttacctttcaggtgctaaacaatgggccaagcagactaccg
ggctccactgtggacataaggatacctaacaggctggcaggcaatggagccaatatgttc
cacatcatagacacacaagtagctgagggcagagggaactgtacatggcatagaaacccc
acaccatgcatcatcccccaggacagagagagtattttccacaccatatttgcgttcttc
accaagtctggcaggaaagtcttggactgtgaccggccaggaagagcctgtctaaccatt
tcctgtagcctaggatcccaagcaaaagatgaggctacagtaattgatgtgcaaatgcta
ctgaacactgaaacacttaagaaagacagctcttcagttattcagtttgttacacgaagc
catgtccaagtggacagccgagctatggaggtgcccactggcctaccagaggacatttct
ctggtatttgaggcactgcatagtcaggaacccaggggttatgtggtgggttggatcatt
gccatcagtctgcttgtgggaatcctcatcttcctcctgctggctgtgctgctctggaag
atgggatttttcaggcggcattaccgagaaataatagaagcagaaaagaacagaaaagac
agtgatgagagctgggattgggttcagaggagtgaatga
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integrated database retrieval system
