Neoarius graeffei (lesser salmon catfish): 132889217
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Entry
132889217 CDS
T10798
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132889217 (gigyf1a)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132889217 (gigyf1a)
Surveillance factors
Other surveillance factors
132889217 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
132889217
NCBI-ProteinID:
XP_060781508
LinkDB
All DBs
Position
1:complement(74903556..74993048)
Genome browser
AA seq
1002 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKDNKIPEDM
QDKVFAAILQDEPQQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGGGAIPASMTRGRGS
VRGGRGRGRGESGFYQRSNEDGEVGFSRSVREIHRSQSWDDRGERRFDKPVRREGLRVGF
EDVGTGGRKEFMRSDSDNWRTLREENEQEEGGDTGGSWRLAGSRRDDGGPRSAGWREHSE
ARRRKFDFDFRDGGSEGGRRRAGSEGAEDERDGLPEWCTDEEDGEMGTFDSSGAFMPIKK
GSKDPIPEEEFEFQGLEDEDECGTDGEKKDNSVGDKAERDETDSAAVCEVEVKSLSPSSP
SSMSLIAPQAEPMPNAAPTCLEDSQHVPAMPSKMPSEVLSEPVSELSPSASSSLPSSSPS
SSSAATDLPPLGGDPEDDEGMKHLQQEAEKMVAALQDTSLEEECFTQTLQESRNTAAALP
LSHDSAMKWFYKDPQGEIQGPFSTVEMCEWFQAGYFSMSLLVKRGCDEGFQPLGDVIKMW
GRVPFAPGPSPPPLLCNLDQDRLKKQQELATAALYQQLQQHQLFQLINRCGEQGMIPSMN
RSMSVPDTGSMWDMHTSASQPTGGEASLWDLTMNSSTQGPTLEQLQKLQERREAELRAKR
EEEERKRRDEKRRQQQEEQKRREEEELFRRKQELLMKLLQQAPRQGAAGTGSGWSTGPVP
GLGKQGKSINTLEIQQDTERLYKQQQRAQQQRWATEGLWGSAGMDGKAAGGSSPSGGSIG
VWDEALKNQSALRSSMGLKNSRSSPSLSDQYMMMNRRKRTDDEERLLKLLQGMKAQDGFT
TWCEQMLHALNTSANNSNSSLDVATIVAYLKEVESPYEVLDFIRSYLGDTVEAKEFAKQF
LERRAKQKANHQRQQQLSKEVGGLTMNSFPLQDSMRGMNPAALQSMFQAVHSGKGVMGYD
QAGKLKKKQPMMLHSDPSILGYSFHGAGDRLSLNEMEMVEDY
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagagacactcaatttcggcccagaatggctccgtgcactttccagtggaggc
agtgtgacttcccctcctccctctcccgctatgccaaagtacaagctggccgaatatcgc
tacggccgggaggagatgttagcactttatatcaaagacaacaagataccagaggacatg
caggataaggtgtttgctgctattctgcaggatgaacctcagcaacctctggcactggtg
cctctcactgaggaagaacagcggaacttttccatgtccgtcaacagtgtggctgtgctg
aggcttatgggtaaaggtggtggggccattcctgcgagtatgacccgtggcagaggcagt
gtgagaggtggccgaggtaggggccgtggagagagtgggttctaccaaagaagtaatgag
gatggagaggtgggcttcagcaggagtgttagagagatccaccgtagccagagctgggat
gaccggggcgagaggcgctttgacaagcctgtgcgcagggaggggttgcgtgttggcttt
gaagatgtgggcactggggggaggaaagagttcatgcgttcagacagtgataactggcgc
acactgcgagaggagaatgagcaggaggagggtggagacacaggaggcagctggagactg
gctggctcacgccgagatgatggtggtccccgttcagcaggctggcgggagcatagtgag
gctcgtcgtagaaagtttgacttcgacttccgggatggagggagtgagggaggaaggagg
agagcaggaagtgaaggggcagaggacgagagagacggtctgccggagtggtgcactgat
gaggaagatggagagatgggtacctttgactcttctggagcattcatgccaatcaagaag
ggctctaaggaccctattccagaagaggagtttgagtttcagggtctagaagatgaggat
gagtgtggtacagatggagagaagaaagacaacagtgtgggagacaaagccgagagagat
gagaccgactctgcagctgtgtgtgaggtagaggtgaaatctctctctccctcctctcca
tcctccatgtccctcattgctcctcaggccgagcccatgcccaatgctgcccccacttgt
ctggaggattctcagcatgtacctgccatgcccagcaagatgccaagtgaagtgttatca
gagcctgtgtctgagttgagccctagtgcctcctccagtctgccttcatcctctccttcc
tcttcctctgctgctactgacctcccaccactggggggtgaccccgaggacgacgagggc
atgaagcacctgcagcaggaggcagagaaaatggttgcagctcttcaggacacatctctg
gaggaagagtgtttcacccagacactgcaggagagcagaaacactgcagctgccctgcct
ctctcccacgactctgccatgaagtggttctacaaagacccacagggagagattcagggc
ccctttagcacagtagagatgtgtgagtggttccaggcaggctacttcagcatgtctttg
ctggtgaagcgtggctgtgacgagggtttccagcctctgggagacgtgattaagatgtgg
gggcgggtgccctttgcacccggcccctccccaccgccactgctgtgtaatctggatcag
gacagactgaagaagcagcaggagttggctacagctgctctttaccagcaactgcaacag
catcagcttttccaactcattaacaggtgcggagagcagggtatgattccttcgatgaac
agatcaatgtcagtgccagatacagggtccatgtgggacatgcatacctcagcctcacag
ccgacaggtggtgaggccagtctatgggacttaacaatgaattcttcaactcagggtcca
actcttgaacagcttcagaagctccaggagagaagagaggctgaactcagggctaagcgg
gaagaggaagagagaaaaagaagggatgaaaagagaagacagcaacaggaagaacagaag
aggagagaggaggaagagctcttcaggcgcaaacaggagctgctgatgaagttactgcag
caggctccacgtcagggggctgccggcaccggctcaggctggagcaccggcccagtgcct
ggactggggaagcagggcaagtccatcaatacgctggagattcaacaggacaccgaaaga
ctctacaaacagcagcaaagagcccaacaacaaagatgggctacagagggtctctggggt
tctgctggcatggatgggaaggcagctggtggcagcagtccttcaggtggaagcattggg
gtttgggacgaggccctaaagaaccagagcgccctccgcagcagcatgggcctgaaaaac
agccgcagtagcccctcgctcagtgatcagtacatgatgatgaatcgccgcaaacggact
gatgacgaggagcgcttactgaagctcttgcaggggatgaaggctcaggatggctttaca
acatggtgcgagcagatgctgcatgctcttaacacctctgccaacaactccaactcctcc
ctggatgtggccacgattgtggcatatctgaaggaagtggagtcgccgtatgaggtgttg
gacttcatccgttcctatctgggtgacactgtggaagccaaagagtttgccaagcagttt
ctggagcgccgtgccaaacagaaagccaaccatcagaggcagcagcagctctcgaaggaa
gtgggtggactgaccatgaacagctttcctctgcaggattctatgcgaggaatgaaccct
gctgctttgcagtccatgttccaggcagtgcattctgggaagggagtaatgggctacgac
caggcagggaaactgaagaagaaacagcccatgatgctgcactctgatcctagcatctta
ggttactcattccatggtgcaggggatcggctgagcctgaatgagatggagatggtggag
gattactga
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