Neoarius graeffei (lesser salmon catfish): 132889217
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Entry
132889217 CDS
T10798
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132889217 (gigyf1a)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132889217 (gigyf1a)
Surveillance factors
Other surveillance factors
132889217 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
132889217
NCBI-ProteinID:
XP_060781508
LinkDB
All DBs
Position
1:complement(74903556..74993048)
Genome browser
AA seq
1002 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKDNKIPEDM
QDKVFAAILQDEPQQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGGGAIPASMTRGRGS
VRGGRGRGRGESGFYQRSNEDGEVGFSRSVREIHRSQSWDDRGERRFDKPVRREGLRVGF
EDVGTGGRKEFMRSDSDNWRTLREENEQEEGGDTGGSWRLAGSRRDDGGPRSAGWREHSE
ARRRKFDFDFRDGGSEGGRRRAGSEGAEDERDGLPEWCTDEEDGEMGTFDSSGAFMPIKK
GSKDPIPEEEFEFQGLEDEDECGTDGEKKDNSVGDKAERDETDSAAVCEVEVKSLSPSSP
SSMSLIAPQAEPMPNAAPTCLEDSQHVPAMPSKMPSEVLSEPVSELSPSASSSLPSSSPS
SSSAATDLPPLGGDPEDDEGMKHLQQEAEKMVAALQDTSLEEECFTQTLQESRNTAAALP
LSHDSAMKWFYKDPQGEIQGPFSTVEMCEWFQAGYFSMSLLVKRGCDEGFQPLGDVIKMW
GRVPFAPGPSPPPLLCNLDQDRLKKQQELATAALYQQLQQHQLFQLINRCGEQGMIPSMN
RSMSVPDTGSMWDMHTSASQPTGGEASLWDLTMNSSTQGPTLEQLQKLQERREAELRAKR
EEEERKRRDEKRRQQQEEQKRREEEELFRRKQELLMKLLQQAPRQGAAGTGSGWSTGPVP
GLGKQGKSINTLEIQQDTERLYKQQQRAQQQRWATEGLWGSAGMDGKAAGGSSPSGGSIG
VWDEALKNQSALRSSMGLKNSRSSPSLSDQYMMMNRRKRTDDEERLLKLLQGMKAQDGFT
TWCEQMLHALNTSANNSNSSLDVATIVAYLKEVESPYEVLDFIRSYLGDTVEAKEFAKQF
LERRAKQKANHQRQQQLSKEVGGLTMNSFPLQDSMRGMNPAALQSMFQAVHSGKGVMGYD
QAGKLKKKQPMMLHSDPSILGYSFHGAGDRLSLNEMEMVEDY
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagagacactcaatttcggcccagaatggctccgtgcactttccagtggaggc
agtgtgacttcccctcctccctctcccgctatgccaaagtacaagctggccgaatatcgc
tacggccgggaggagatgttagcactttatatcaaagacaacaagataccagaggacatg
caggataaggtgtttgctgctattctgcaggatgaacctcagcaacctctggcactggtg
cctctcactgaggaagaacagcggaacttttccatgtccgtcaacagtgtggctgtgctg
aggcttatgggtaaaggtggtggggccattcctgcgagtatgacccgtggcagaggcagt
gtgagaggtggccgaggtaggggccgtggagagagtgggttctaccaaagaagtaatgag
gatggagaggtgggcttcagcaggagtgttagagagatccaccgtagccagagctgggat
gaccggggcgagaggcgctttgacaagcctgtgcgcagggaggggttgcgtgttggcttt
gaagatgtgggcactggggggaggaaagagttcatgcgttcagacagtgataactggcgc
acactgcgagaggagaatgagcaggaggagggtggagacacaggaggcagctggagactg
gctggctcacgccgagatgatggtggtccccgttcagcaggctggcgggagcatagtgag
gctcgtcgtagaaagtttgacttcgacttccgggatggagggagtgagggaggaaggagg
agagcaggaagtgaaggggcagaggacgagagagacggtctgccggagtggtgcactgat
gaggaagatggagagatgggtacctttgactcttctggagcattcatgccaatcaagaag
ggctctaaggaccctattccagaagaggagtttgagtttcagggtctagaagatgaggat
gagtgtggtacagatggagagaagaaagacaacagtgtgggagacaaagccgagagagat
gagaccgactctgcagctgtgtgtgaggtagaggtgaaatctctctctccctcctctcca
tcctccatgtccctcattgctcctcaggccgagcccatgcccaatgctgcccccacttgt
ctggaggattctcagcatgtacctgccatgcccagcaagatgccaagtgaagtgttatca
gagcctgtgtctgagttgagccctagtgcctcctccagtctgccttcatcctctccttcc
tcttcctctgctgctactgacctcccaccactggggggtgaccccgaggacgacgagggc
atgaagcacctgcagcaggaggcagagaaaatggttgcagctcttcaggacacatctctg
gaggaagagtgtttcacccagacactgcaggagagcagaaacactgcagctgccctgcct
ctctcccacgactctgccatgaagtggttctacaaagacccacagggagagattcagggc
ccctttagcacagtagagatgtgtgagtggttccaggcaggctacttcagcatgtctttg
ctggtgaagcgtggctgtgacgagggtttccagcctctgggagacgtgattaagatgtgg
gggcgggtgccctttgcacccggcccctccccaccgccactgctgtgtaatctggatcag
gacagactgaagaagcagcaggagttggctacagctgctctttaccagcaactgcaacag
catcagcttttccaactcattaacaggtgcggagagcagggtatgattccttcgatgaac
agatcaatgtcagtgccagatacagggtccatgtgggacatgcatacctcagcctcacag
ccgacaggtggtgaggccagtctatgggacttaacaatgaattcttcaactcagggtcca
actcttgaacagcttcagaagctccaggagagaagagaggctgaactcagggctaagcgg
gaagaggaagagagaaaaagaagggatgaaaagagaagacagcaacaggaagaacagaag
aggagagaggaggaagagctcttcaggcgcaaacaggagctgctgatgaagttactgcag
caggctccacgtcagggggctgccggcaccggctcaggctggagcaccggcccagtgcct
ggactggggaagcagggcaagtccatcaatacgctggagattcaacaggacaccgaaaga
ctctacaaacagcagcaaagagcccaacaacaaagatgggctacagagggtctctggggt
tctgctggcatggatgggaaggcagctggtggcagcagtccttcaggtggaagcattggg
gtttgggacgaggccctaaagaaccagagcgccctccgcagcagcatgggcctgaaaaac
agccgcagtagcccctcgctcagtgatcagtacatgatgatgaatcgccgcaaacggact
gatgacgaggagcgcttactgaagctcttgcaggggatgaaggctcaggatggctttaca
acatggtgcgagcagatgctgcatgctcttaacacctctgccaacaactccaactcctcc
ctggatgtggccacgattgtggcatatctgaaggaagtggagtcgccgtatgaggtgttg
gacttcatccgttcctatctgggtgacactgtggaagccaaagagtttgccaagcagttt
ctggagcgccgtgccaaacagaaagccaaccatcagaggcagcagcagctctcgaaggaa
gtgggtggactgaccatgaacagctttcctctgcaggattctatgcgaggaatgaaccct
gctgctttgcagtccatgttccaggcagtgcattctgggaagggagtaatgggctacgac
caggcagggaaactgaagaagaaacagcccatgatgctgcactctgatcctagcatctta
ggttactcattccatggtgcaggggatcggctgagcctgaatgagatggagatggtggag
gattactga
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