Neoarius graeffei (lesser salmon catfish): 132889289
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Entry
132889289 CDS
T10798
Symbol
lrpprc
Name
(RefSeq) leucine-rich PPR motif-containing protein, mitochondrial
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ngra03029
]
132889289 (lrpprc)
Mitochondrial biogenesis [BR:
ngra03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
132889289 (lrpprc)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
TPR_24
PPR_long
PPR_3
PPR_1
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
132889289
NCBI-ProteinID:
XP_060781602
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Position
7:40163568..40275783
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AA seq
1434 aa
AA seq
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MAALFRSARLLKLSPSPLLRVKTSSHGPPVSCLYSRAVGGRGAEACSSRMVLRSMETSRS
AGSSLGLRCFSAAAERKGVVKDEPSIALRAKQAQQFDWALAKLDSSVRRTGRVTKTLIQR
IFHDICRTGYPSSNQALLLLRSCGSLLPEMPLEERSQLAHRVWEKLQELGATYDVSHYNA
LLKVYLQNEFKFSPTDFLGKMEAANVQPNRVTYQRLIAAYCQNGDIEGASKILGFMKNKD
LPITEAVFNSLVTGHSRAGDMESAENILSVMRGAGIEPGPDTYLALLTAYAELGNMTKIK
ETLNTAQSKDANLMDRDLMQLVFILAKAGHQQYVPEIVECMRHERGYVPDAMNLCLSLIT
QGFEDTAFTVLKTFPTLQTELQDGETLNMGNFFLRHCVNMNKSPEKLVAFCTQLKDSNLH
SSPLQFTLYCALESKNTVLAVEVMKKMKEEGLPIRPHYFWPLLTKHQKDKNTQGTLEVLK
AMQDLDVHLDVDTYSTYVLPTFSSIDSARVALKDAGCALDTDEFIAAEVRTVAASGRLSE
LYSLLSSPSFPAVSLSSFRGSLISGFRGSKDVESMAKITELLYNDSRFGQTDADRAETTA
YFLFNLFDGMTETEVQAKEEMLREYLNQLSNMNIIIHVNIYRGIRNILNSYHVPELIKDV
LVLVDNQSREDASLESKVLEGKLAFQERRLEELKLQGKPIGNVFRQLIATLCAEENLARA
LELKTQYENEMTASCYALLINLCCRHDNPEEALNLKRELARKDSEVTLDANKYMSLVRVL
SKHGRVEEAADILKEMKKKDVRMLDTTTTRLFHILNAAALKGDITTIRRLQDTVFTLGLV
KPTSNLCSPLVSAYLESGDVIGALEASMECQKQYNQMPRIHDIICRLVEKGETEPLQKAM
DFVSQERGEMMMLYDLYFAFLQTGRYKEARKILETPGLRARAGRLQWFAEKCIASQQMEP
LENMVDMTAKLFECDRDEMYHYMLRLCMDINDWQKAEAVWTKMQEENVIPRERTLRLLAD
ILKSNNQEVPFDMPEMWYEQPESEDHSEDVKEERLKVEESTGSTASFSRETRPHDYHLTV
MTLSKKGKVEEAYKVVKETHRKGLALAAGSYDILIKALLARGNLNDAMEVKDIASKHIAG
FKLSEMANNLHIVTLVKQGDVKGALVSLKDMLQSDQVPSQLAFTRLVQGLGNHGDIEAIQ
EVESMVKNLGTSVNLSYMLFVNNKALAHIKNGDIGSAVEGLEALYIQNSEAPQKSIAFVF
RKVLDANNGAALDKLSAMVERLCNHFATYRPATDLFLQYIDAGRIEDARFLLQRCAAVAE
QKDIMVAYMTKISQNPGQIAKIKNLFELIPDFEKENIYTFMLKCYSMDKDLTSAKALYQQ
IQDEGLQINELSLKRLALLYKNAGEAVPFEEPPETFKFYADKLKALHTQSPPDN
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgctcttcagatctgctcggctgctgaaactctcgccttctcctttgctccga
gtaaagacaagcagtcatgggccgccggttagttgcttatacagcagagcagtcggcggg
agaggagctgaagcttgttcgagtcgaatggttttgagatctatggaaacgagcaggtct
gctgggtcctctttgggtctgcggtgcttcagtgcagccgctgagaggaaaggtgtggta
aaagatgagccgagtatcgctttacgtgccaagcaggctcagcagtttgactgggctctc
gctaaactagacagctctgtcagacggactggtagagtcaccaaaacattgattcagcgc
atctttcatgacatctgccgaacaggataccccagtagcaatcaggccctgctgctgttg
aggagctgtggctcactgctgcccgagatgccccttgaagagcgcagtcagctggctcac
cgggtctgggagaagctgcaggagttgggtgccacttatgatgtaagccattacaatgcg
ctgcttaaagtctacctgcagaatgagttcaagttctcgcccactgattttcttggcaag
atggaagcagccaatgtgcagcccaacagagtgacgtatcagagactgattgcagcgtac
tgtcaaaatggtgacattgaaggcgcaagtaaaattctgggattcatgaagaacaaagac
ttgcccatcacagaggccgtgtttaactctctggtaacgggtcacagccgagccggagac
atggagagtgcagaaaacatcctgtccgttatgagaggggcggggattgagccgggccca
gacacgtacctcgctttactcacggcttatgctgaattgggaaacatgaccaaaatcaag
gagactctgaacacagcgcagagtaaagatgccaatctgatggacagagacctgatgcag
ctggtgttcattctggctaaagctggccatcagcagtatgtgcctgaaatagtggagtgc
atgcggcatgagagaggctacgtgccagatgcaatgaacctgtgtttgagtctgatcacc
cagggctttgaggacacagcgtttaccgtgctgaagaccttccccactctacagacagag
ttgcaggacggtgaaactctgaacatgggcaacttcttcctccgtcactgtgtgaacatg
aataagtccccggaaaagttggtcgctttctgcacacaactgaaggattccaacctgcac
tcttcaccactgcagttcacactgtattgcgctctggagtccaagaacacagtgttggca
gtagaggtgatgaagaagatgaaggaagaaggacttcctatcaggcctcactacttctgg
ccccttttaaccaagcatcagaaagacaaaaacacacaaggtactctggaggtgctgaag
gccatgcaagacttggatgttcatcttgatgttgacacttactccacctatgtactgcct
actttctcctccatagacagcgcccgtgttgctctgaaggatgctggctgtgcactcgac
actgatgaattcattgcagcagaagtgcgaacagtggcagcaagtggaagactttcagag
ctctactcgctgttgtcttcaccctcctttccagccgtttcccttagttcattcagagga
agcctgatcagtggctttagggggtctaaagatgtggagagcatggccaagattacagag
cttctttataacgatagccgctttggtcagactgatgcggaccgagcagaaaccacggcc
tactttctctttaaccttttcgatggaatgaccgagaccgaggtgcaggccaaagaggag
atgttgagagaataccttaatcagctcagcaatatgaacatcatcattcatgtgaacatc
tacagaggaatcaggaacatcctgaactcgtaccatgtgccagaactaattaaggacgtt
cttgttcttgtggacaatcaatcaagagaagacgctagtcttgagtctaaggttcttgaa
gggaaactagcctttcaagagagaaggctggaggagctgaaattgcaggggaagccaatt
ggaaatgtgttccggcagctcatcgcaaccctgtgtgctgaggagaacctggcccgtgct
ctggagctaaaaactcagtatgagaatgaaatgactgccagttgctatgccctgcttatc
aacctctgctgtcgtcacgacaaccccgaggaagcacttaacctgaagagagagctagcc
cgtaaggactcggaggtcacgctggatgccaacaaatacatgagcttggtcagggtgctc
tccaaacatggcagggttgaagaggctgcggacatcctgaaagagatgaagaaaaaggac
gtgaggatgttggacaccacgaccaccaggttgttccacatactcaatgcagctgctctg
aagggcgacatcaccaccattcggcgcctgcaggacacagtgttcaccttaggcctggtc
aagcccaccagcaacctctgctcaccactggtttcagcttacctagagagtggggatgtg
attggagctctggaggcaagcatggagtgccaaaagcagtacaaccaaatgccccggatt
catgacatcatctgtcgtctagtggagaaaggagagactgagccactacaaaaagctatg
gactttgtgagccaggagcgtggtgagatgatgatgctctacgacctttacttcgctttc
ctgcagacaggccgctacaaggaggcacgcaaaatccttgagacccctggtttaagggca
agagcaggtcgactccagtggtttgcagagaagtgcattgcatcccagcagatggagcct
cttgaaaacatggtggatatgactgcaaagctgtttgaatgtgaccgagatgaaatgtac
cactacatgctgcgcctctgcatggacataaatgactggcaaaaggcagaagctgtctgg
actaagatgcaggaggagaatgtgattccccgagaaagaaccctgcgcctgcttgctgat
atcctcaagagcaacaaccaggaggtgccctttgacatgcctgagatgtggtatgaacaa
cctgaatccgaggatcattctgaggacgtcaaagaggagcgtttaaaagtggaagaaagt
accggttccacagcgtctttttcaagagagactagaccccatgattatcacctcactgtt
atgactctcagcaaaaaagggaaagttgaagaggcctataaggtggtgaaggagacacac
aggaagggtctggctctggcagctggttcatatgacatcctcatcaaggccctgctggcc
agaggaaaccttaatgatgccatggaagtaaaagacattgcttccaaacatattgcagga
ttcaagctgagtgaaatggccaacaacctccatatagtgacactagtaaagcaaggagat
gttaaaggagccttggttagtcttaaggacatgctgcagtctgaccaggtcccttcccaa
cttgcttttacccgattggtccagggactgggtaaccacggagacatagaggccatccag
gaagtggagagcatggttaagaatttgggaacctccgtcaacctgtcctacatgctgttt
gtgaacaacaaggctttggctcatatcaaaaatggggacattggcagtgcagtggaagga
ctcgaggctttgtacatccagaactcagaagctccgcaaaaaagcatcgcctttgtcttc
cgtaaagttctcgatgccaacaacggtgctgcacttgataaactgagtgccatggtggag
cggctgtgtaatcactttgccacctacagacctgccacagacctcttcctgcagtacata
gacgcgggcaggatagaggacgccaggttcctgctgcagcgatgtgcagcagtggctgag
cagaaggatatcatggtggcatacatgaccaaaatttctcagaatccagggcagattgcc
aagataaagaatctgttcgagctcatcccagacttcgagaaggagaacatctacaccttc
atgttgaagtgctatagtatggataaagacctgacctcagccaaggctctttatcagcag
atacaggatgaagggctgcagatcaacgagttgtctctgaagagactggcgctgctgtac
aagaatgccggagaggccgtgcccttcgaagaacctccagagacattcaagttctacgca
gacaaactgaaagccttgcacacccagagtcctccagataactag
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