Neoarius graeffei (lesser salmon catfish): 132889381
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Entry
132889381 CDS
T10798
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
132889381 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngra04040
]
132889381 (kcnma1a)
Ion channels [BR:
ngra04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
132889381 (kcnma1a)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
132889381
NCBI-ProteinID:
XP_060781784
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Position
7:complement(47237833..47610542)
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AA seq
1142 aa
AA seq
DB search
MLAVADHNASHDGTSRMTNIFPNNQDSSVSMSRMDVIIPFSPDVPCDNNGQRMWWAFLAS
SMVTFFGGLFIILLWRTLKYLWTVCCHCGVKNKEAQKVNNGQADGPVKGQDEKDDAPASE
VGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQNFYKDFTL
QIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLR
ALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQ
PLSYWECVYLLMVTMSTVGYGDVCAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRK
KYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEAL
FKRHFTQVEFYQGSVLNPHDLARVKIESADSCLILANKYCADPDAEDASNIMRVISIKNY
HPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQGLSTMLANL
FSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLKLLLIAIEY
KSEQRESSILINPGNHVKMQEGTLGFFIASDAKEVKRAYFYCKACHDDITDPKRIKKCGC
KRLEDEHPSALSPKKKQRNGGMRNSPNCSPKVMRHDPLLIPGNEQIENMDVNVKRYDSTG
MFHWCPSKDIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASNFHYHE
LKHIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNI
DDASLQDKECILATLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGLVRQVSV
TTGSNIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFN
DNILTLIRTLVTGGATPELEALLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADL
GDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSTLSQCTKRYVITNPPYEFELVPTDQIF
CLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIPATNRPNRSSKTRESRDKHKKEMV
YR
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgtggcagatcacaacgcttcccacgacggcacctctagaatgactaatatc
ttcccgaataaccaggactcttctgtctccatgtccaggatggacgtgatcatcccgttc
tccccagacgtgccgtgtgataacaatggccagcgcatgtggtgggctttcctcgcctca
tccatggtgacgttcttcgggggcctctttatcatcctcctgtggaggaccctcaagtac
ctgtggactgtctgctgccattgtggcgtcaaaaacaaggaggcccagaaagtgaataac
gggcaggcagatgggccagtgaagggccaggatgagaaggatgatgccccagctagtgag
gtgggctggatgacctcagtgaaagactgggccggggtcatgatctcagcacagactctc
acaggcagagtactggtggtcttagtctttgctctcagtattggagcccttggaatatac
ttcatagactcgtctgaccctatagaatcctgtcagaatttctataaagacttcacgtta
cagatcgacatggccttcaatgtcttcttcctactctactttggtctgcgttttattgca
gcaaacgataagctgtggttctggctggaggtgaactctgtggtggatttctttactgtg
ccaccagtgtttgtgtccgtgtatcttaacaggagctggctgggtctgagatttctaaga
gccttgagactgatacagttctcagaaattttacagtttttgaatatcttaaaaacaagt
aattccatcaagctggtgaacctgtgttccatcttcataagcacatggctcacagctgca
ggattcattcatctggtggaaaactcaggggatccttgggaaaacttccaaaattcccaa
ccactttcatattgggaatgcgtgtacttactcatggtcaccatgtccacggtgggatac
ggggacgtctgtgcgaaaaccacccttggccggcttttcatggtcttcttcattcttggc
ggtttggccatgtttgccagctacgtccctgaaatcatagagttaataggaaaccgcaag
aaatatggtggttcctatagtgcggttaatggcagaaagcatattgtggtctgtggtcat
atcacacttgaaagcgtatccaacttccttaaagacttcctacacaaggacagggatgat
gtcaatgtagaaattgtttttcttcataatatttcccctaatcttgagctggaagccttg
ttcaaacgtcatttcactcaggtggaattctaccaaggatctgttcttaacccacatgat
ctagctagagtcaagatcgagtcagcggactcgtgcttaattctcgccaacaaatactgc
gcagacccggatgctgaagatgcatcaaacataatgagagtaatatccatcaagaattac
catccaaagataagaataattactcaaatgttgcagtaccacaacaaggcccatctgcta
aacattcccagctggaactggaaggagggcgatgatgcgatctgcctggccgaactgaag
gcaggtttcatagcccagagttgcctggcacagggcctgtccaccatgcttgccaacctg
ttctccatgaggtcattcatcaagattgaagaggacacatggcagaagtattatctggag
ggagtggccaatgagatgtacaccgagtacctatccagtgcctttgtgggcctttctttt
cctacagtttgtgagctatgttatgtgaagctcaaattgttgttgatcgctattgaatac
aagtcagagcagagggaaagcagtattctgatcaaccctggaaaccatgtaaagatgcag
gagggaaccttgggattctttattgccagtgatgctaaagaggtcaaaagagcatatttc
tactgcaaagcttgtcatgatgacatcacagatcccaaaaggatcaaaaagtgtggctgc
aagaggcttgaagacgagcatccatcagcgctgtcacccaaaaagaagcagcgcaacgga
ggcatgcgaaattcacccaactgctcacccaaagtgatgagacatgaccctttacttatc
ccaggaaatgaacagattgagaatatggacgtgaacgtgaagagatacgactccactgga
atgtttcactggtgtccttccaaagacattgagaaagtcattctgacgagaagtgaggcc
tccatgacggttctgagtgggcacgtcgtggtctgtatatttggagacgtcacttctgct
ttagtggggctacgcaacttggtgatgcctttaagagcaagtaacttccattaccatgag
ctaaagcacatcgtatttgtaggctcactggaatatctgaggagggaatgggaaaccctt
cacaacttccccaaggtctccatcttacccggcacaccattaagtcgagctgatttaagg
gctgtaaacatcaacctctgcgacatgtgcgttatcctttcagccaatcagaacaatatc
gacgatgcttcactgcaggacaaggaatgcatcttggcaacactcaacatcaaatctatg
cagtttgatgacagcattggggtcctgcaggctaattcccaaggttttacgcctccagga
atggacagatcatctccagacaacagtccagtgcatgggttggttcgccaagtgtccgtc
accactggctccaacatcccaatcataactgaactagtgaatgattcaaacgttcagttc
ctggaccaagatgacgatgatgacccggatacagagctgtatctgacccagccctttgcc
tgtgggacagcttttgctgtcagtgtgctcgactccctgatgagcgctacgtacttcaac
gataatatcctgacgctgatccggacactggtgacaggaggggccacaccggagctcgag
gcactgttggccgaggagaatgcactacgtggggggtatagcacgccgcagacgctagct
aacagggacaggtgtcgcgtggcacagcttgccctctatgatggcccttttgcagacttg
ggggatggtggttgttatggggacttgttttgtaaagcgttaaaaacctacaacatgctg
tgctttggaatatatagattaagagatgcgcatctaagtacgctgagccagtgcacaaaa
aggtatgtcatcaccaacccaccctacgagttcgagctcgtccctacagaccagattttc
tgcctgatgcagtttgaccacaacgcaggtcagtcgcgaaccagcctgtcacactcgtct
cattcctcacactcgtccagcaagaagagctcttcagttcactccatcccagccaccaac
cggcccaaccgcagcagcaagacccgcgaaagccgcgacaaacacaaaaaagaaatggtt
tacagatga
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