Neoarius graeffei (lesser salmon catfish): 132889489
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Entry
132889489 CDS
T10798
Name
(RefSeq) elongation factor 1-alpha 1
KO
K03231
elongation factor 1-alpha
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132889489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132889489
03016 Transfer RNA biogenesis [BR:
ngra03016
]
132889489
03012 Translation factors [BR:
ngra03012
]
132889489
04131 Membrane trafficking [BR:
ngra04131
]
132889489
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132889489
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
132889489
Transfer RNA biogenesis [BR:
ngra03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
132889489
Translation factors [BR:
ngra03012
]
Eukaryotic type
Elongation factors
132889489
Membrane trafficking [BR:
ngra04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
132889489
Exosome [BR:
ngra04147
]
Exosomal proteins
Proteins found in most exosomes
132889489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
132889489
NCBI-ProteinID:
XP_060782027
LinkDB
All DBs
Position
7:complement(56799291..56820226)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPETVAFVPISGWNGDNMLEASPNMTWFKGWKITRKDGSASGTTLLEALDAIQPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNVTTEVKSVEMHHEALS
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAAGFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKNLKSGDAAIVDMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKAPTGGKVTKSAQKAQKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggagaagctccacatcaacattgtggtcattggccatgttgactctggcaag
tccactacaactggccacctcatctacaagtgtggtggcatcgacaagagaaccatcgag
aagtttgagaaggaagctgccgagatgggtaagggatcctttaagtatgcctgggtgttg
gataagctgaaggcggagcgggagcgtggtatcaccattgacatatccctgtggaaattt
gagaccagcaagtactatgtcacaatcatcgatgctcctgggcatagagacttcatcaaa
aacatgattactggcacctcccaggcagactgtgctgtcctgatagtggcagctggcgtt
ggcgagtttgaagctggtatctcaaagaacggtcaaaccagagagcatgcactcctggcg
tatacgctgggtgtaaaacagctcatcgtgggtgttaataagatggactccactgagccc
aactacagccagaaacgctatgaggaaattgtaaaggaagtcagcacttacattaagaaa
attggctacaaccctgaaaccgtggcatttgtccccatttctgggtggaatggtgataac
atgttggaggccagccccaatatgacttggtttaagggctggaagatcacccgtaaggat
ggcagtgcatcaggaactactcttctggaggctctggatgccatccagcccccaactcgt
cccactgataaaccactccgtctgcctctgcaggacgtctacaagattggaggcattgga
actgtacccgtgggtcgtgtggagactggtattctgaagccagggatggtggtaaccttt
gcacctgttaatgttactactgaggtgaagtctgtggagatgcaccatgaggctctgtct
gaggccctgccaggggacaatgtgggcttcaatgtcaaaaacgtctcggtgaaggatatc
cgccgtgggaatgtcgctggggacagcaagaatgatccaccccaggaggcagctggcttc
actgctcaagtgatcatcctgaaccaccctgggcaaatcagtgctggttatgctccagtg
ctcgactgccacactgcacatatcgcctgcaagtttgctgagctcaaggagaagattgac
cgccgctctggaaagaaacttgaggataatcctaagaacctcaagtctggggatgccgcc
attgtggacatgatccctgggaaacctatgtgtgtggagagcttctcggagtatccgcct
cttgggcgctttgctgtgcgtgacatgcgtcagactgtggcagttggagtgatcaaggga
gttgagaagaaggctccaactggtggaaaggtcaccaagtctgctcagaaggcccagaaa
gccaaatga
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