Neoarius graeffei (lesser salmon catfish): 132889496
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Entry
132889496 CDS
T10798
Symbol
fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03460
Fanconi anemia pathway
ngra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132889496 (fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
132889496 (fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132889496 (fancl)
03400 DNA repair and recombination proteins [BR:
ngra03400
]
132889496 (fancl)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132889496 (fancl)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132889496 (fancl)
DNA repair and recombination proteins [BR:
ngra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
132889496 (fancl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
zf-HC5HC2H
PHD_NSD
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
132889496
NCBI-ProteinID:
XP_060782045
LinkDB
All DBs
Position
7:complement(57619082..57663383)
Genome browser
AA seq
371 aa
AA seq
DB search
MTQGLLKEFPLLVALDKEQTIYDGFVSVQERDFRLRITLPPDHQLKQAKLHCCWELKQLL
KNHQHILKQRLQHSSDLFGFLLELRTILEVALKSQPGWPSIPPPQYYSQLIAEIESLGWD
KLMFIDTDFHTLKLKAEDSSHRQHVFTVMLKPKYPAEAPECSADLPVPLVVPWTPQSNLA
HMHSQFLLIVEALAEFWAVMDEIDEHTWVLEPEKPSRADTMRRIAIGNNISIKVEIDPRH
PKMLPECCLLGAEHVVTPLRSKLNANMHLWNPDCSVLQNMKDVMEIEFPSPATHEKSSFS
VECGICYSYRLDSAIPDQVCNDPRCGQPFHQACLYEWLRGLPTSRQSFNIVFGECPYCSK
PITVKMALQKP
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaggcttgcttaaagagtttcctttattagttgcgctggataaagagcaaact
atttacgatggctttgtctcagtacaggaaagagacttcaggttaagaataacgctgcct
ccagaccatcagctgaaacaggcaaaactgcactgctgctgggaactgaaacagctgctg
aaaaaccatcagcacatcctaaagcagaggttacagcattcttcagatttgttcgggttt
cttctggagctgaggaccatattggaagtggcactgaagagccagccaggctggccgtcc
atcccaccacctcagtactattcacagctcatcgcagagatcgagagtttaggatgggat
aagctgatgttcatcgacactgacttccacactcttaagttgaaggcagaggactcctct
catcgtcagcatgtctttacagtcatgcttaaaccaaagtacccagcagaagctccagaa
tgttccgcagatctgcctgtcccactggtcgttccatggactccacagagcaatttagcc
cacatgcatagccagttcctgctgattgtggaggctttggctgaattctgggcagtgatg
gatgagattgatgagcacacctgggtgctggaacctgaaaaacctagcagagcagacacg
atgagaaggatcgctattggaaacaacatctccataaaggttgagatcgaccccaggcac
ccgaagatgttgccagaatgctgcctgcttggagcggagcatgtggtaacccccctgagg
agcaagctgaacgctaacatgcatttatggaaccccgactgcagcgtcctgcagaacatg
aaggatgttatggagatagaattcccgtcacctgccacccacgaaaaatctagttttagt
gtggagtgcggcatttgctattcatatcggctggactctgccattccagatcaggtgtgc
aacgatccacgctgcgggcagccttttcatcaggcctgtctctatgagtggctgagaggt
ttgcccaccagtcgccaaagcttcaacattgtgtttggagaatgtccttactgcagcaag
cccatcacagtgaaaatggctttacaaaaaccatga
DBGET
integrated database retrieval system
