Neoarius graeffei (lesser salmon catfish): 132889714
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Entry
132889714 CDS
T10798
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132889714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132889714
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132889714
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
HECT type E3
132889714
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
132889714
NCBI-ProteinID:
XP_060782467
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All DBs
Position
7:81067339..81192693
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AA seq
1044 aa
AA seq
DB search
MLCWGSSAWGQLGIGVSEAAVFEPRRCCVFDGRGLKEAVCGRQHSLFLMHDGSVYTCGSN
SLGQLGHEKPGVKPELVGALDAQKIAGVACGQAHSLALSEQGQVFAWGAGEWGQLGLGTA
EEAVRVPRLIKKLCEHRISQVMCGNQHCIALSKDGQLFTWGQNSSGQLGLGKSEPSCLCP
QPLKSLCGIPLSQISAGGDHSFALSLSGAVFGWGRNSAGQLGLNDEQDRAVPCHIKFLRS
QKVVYISCGEEHTAALTKDGGLFTFGNGSRGQLGHDSTNNEPLPRRVLELMGTEVSQITC
GRHHTLAFVPSTGLVYAFGCNAQGQLGLGTRGNAMIPLPVRNIQPPFLTNTHTGTDHHSI
SRIHCGGDHSFLVLSHGKSCPEDFRVINTSKSISLINKESLNSWRLKLLDSTDSTITNDI
ILLLSSTACWNASFLDQIDDGHFKTNPKVPGIDLDSVRLLFEILMKPAYSRLLEQTTKSF
ESLLIPQLPCSPPDVEAMRIYLILSECPALHDSKNYISLTIPLAMAILRLDANPSKVLDN
WWSLLDGEVFSRLVEMYKSIVVFLLTGGKALLIPMFLESYISATLKLLEKLHKVNQKAHH
VEYSCFYIPDITSLVDIQEDYLRWFLSKAEIKMRSPPVQNSVTLCAYPFILNAQAKTTML
QTDAELQMQMAVSGANLHNVFMLLTLEPLLAQNPFLVLHVRRDHLVSDALRELTIYNDVD
LKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTHYPESNLLWFSDKCFVEHN
WFHLIGIVCGLAIYNSTVVDLHFPLVLYKKLLDVPPALDDLKELSPTEGRSLQQLLDYEE
DDLEDAFCLNFAISREYYGVMEVKELVPGGENKMVDKSNREEFVQAYLNYVFTESVRELY
SAFASGFLKVCGGRILSLFQPSELMAMVVGNSSYNWEELEKNASYKGEFSASHPTVRMFW
EVFHEFPLEKKKQFLLFLTGSDRIPIHGMSSLRIIIQSTSAEEHFLPVAHTCYNLLDLPC
YRSKETLRSRLTRAIEQYEGFSLV
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctggggcagttcggcttggggtcagctgggcatcggtgtatctgaggccgcc
gtgtttgagccgcggcgctgctgcgtgttcgatggcagagggctgaaggaggcagtatgc
ggcaggcagcactcgctgttcctaatgcatgatgggagcgtttacacatgtgggtccaac
agcctcggacagctgggtcatgagaagcctggcgtcaagcctgagctggtcggcgcgcta
gatgcccagaagattgcaggcgtggcatgtgggcaggcccattctctggcactgagtgag
caagggcaggtgtttgcatggggtgcaggcgagtgggggcagctcggtctcggcacagca
gaggaagctgtccgggttccccgattgattaaaaagttgtgtgaacatcggatctctcaa
gtcatgtgtggcaaccagcactgtatcgcactttctaaagacggtcagttgttcacgtgg
ggtcagaactcgagcggtcagctgggtttggggaaaagtgagccgagctgtctgtgtcct
cagcccctcaagtccctgtgtgggatcccactgtctcagatcagcgctggaggagaccac
agcttcgccctgtctctctccggagccgtgttcggctggggcaggaacagcgccgggcag
ctgggcctcaacgacgagcaagatcgagctgttccctgccatattaaattcttgcgctca
cagaaagtggtctacatcagctgtggggaggaacacacagccgccctgaccaaggatgga
ggtctgtttacatttggaaatgggtcgagaggacagctggggcacgactccaccaacaac
gagcctctgccacgcagggttttggagctcatgggcaccgaggtgtcccaaatcacttgt
ggcagacatcacacgctggcgttcgtgccctccaccggcctggtgtacgcctttggctgt
aatgctcagggccagctcggcttagggaccagaggaaatgccatgatccccctgccggtc
cgaaacatccagcctccttttctcaccaacacacacacaggcacagatcatcacagcatc
agcaggattcactgtggaggcgatcacagctttctggtgctgtcacatggcaagagttgc
cctgaggacttccgtgttatcaacacatcgaaaagcatctcgctgattaacaaggagagt
ctaaacagttggaggctgaagctcctggacagcactgactccaccatcacaaatgacatt
attctgctgttgtcgtcgactgcttgttggaacgccagcttcctggaccagatcgatgat
ggtcattttaaaaccaaccccaaagtccctggcatcgacctcgactcagtccggctgctg
ttcgagatactgatgaagccggcctactcacggctgctggagcagaccacaaagagcttc
gagagtttgctgatccctcagctaccctgctctcctcctgatgtcgaggccatgcgcata
tacctgatcctctccgagtgtccggctcttcacgactccaaaaactacatctccctcacc
atcccactcgccatggccatcctccggctggacgccaaccccagcaaagtgctcgataac
tggtggtcactgctggatggtgaggtcttctccagattggtagagatgtataagagcatt
gtggtgttcctgctgactggcggcaaggcccttcttattccgatgtttctggagagctac
attagtgctacgctgaaactgctggagaaactacacaaggtgaaccagaaagctcaccat
gtggaatacagctgcttctatatccctgacatcaccagcctggtggacatccaggaagac
tacctcagatggttcctaagcaaagctgagattaaaatgcgatctcctccagtacagaat
tcagtcacgttatgtgcctacccgttcatattgaacgctcaagctaagacaaccatgttg
cagacagatgctgaactgcagatgcagatggcagtgagcggtgccaacctgcacaacgtg
ttcatgctgttaaccctggaacccttgctggcacaaaacccgtttctcgtcctgcatgtg
cggagggatcacctggtcagcgacgcgctgcgtgagctcacgatctataatgacgtggac
ttgaagaagcccctaaaggtgatttttgacggagaggaggccgtggatgcaggaggagtc
actaaagagttcttcttgctcctgctcaaagaactgatggatccagtctatggcatgttc
acccattacccagaatccaacctgctctggttctctgataaatgttttgttgaacacaac
tggttccacttgatcggaatcgtctgtggcctggctatctacaactccactgtggtggac
ctgcactttcctctcgtgctctacaagaagcttctagatgttcctcctgcgctggatgac
ctgaaggagctgtcccctactgagggcaggagtctgcagcagctgttggactatgaggag
gatgacctagaggacgccttctgtctcaactttgctattagccgggagtattacggggta
atggaggtgaaggagctcgtccctggaggagagaacaaaatggtggacaagtccaacaga
gaggagtttgtgcaggcctatctgaactacgtattcaccgagtcggtgcgagagctgtac
tctgcgtttgccagcggtttcctgaaggtgtgtggtggccggatcctctctctgttccag
ccctctgagctcatggctatggtggtggggaacagcagctacaactgggaggagctggag
aagaatgccagttacaaaggcgagttctcggcctcccaccctacagtgcggatgttttgg
gaggtgttccacgagtttcccttggagaaaaagaaacagttcttattgttcctcacaggc
agcgaccggatccccattcacggcatgtccagccttcgcatcatcatccagtccacgtcg
gcggaggagcacttcctgcccgtcgctcacacctgctacaacctgctggacctgccgtgc
tacaggagcaaagagacgctgcgctcgaggctcacacgcgccatcgagcagtacgaaggc
ttcagcctggtgtga
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