Neoarius graeffei (lesser salmon catfish): 132889730
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Entry
132889730 CDS
T10798
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
132889730 (smarca5)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
132889730 (smarca5)
RSF complex
132889730 (smarca5)
WICH complex
132889730 (smarca5)
B-WICH complex
132889730 (smarca5)
NORC complex
132889730 (smarca5)
BRF complex
132889730 (smarca5)
NuRF complex (fruit fly)
132889730 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132889730
NCBI-ProteinID:
XP_060782502
LinkDB
All DBs
Position
7:complement(83420170..83474973)
Genome browser
AA seq
1040 aa
AA seq
DB search
MSETEGSVDKQREEEARVDTTTAATTTITTITTTQDGVSGAEAAAQDGGEQSSSPVAEKV
KVEQSAGYEEKVKTDRTNRFEYLLKQTEVFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEK
QNLLSAGDNRHRRTEQEEDEELLSESSKAANVCTRFDESPSYVKTGKLRDYQIRGLNWLI
SLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWV
PSLRAVCLIGDRDERTAFIRDTLLPGEWDVCVTSYEMLIIERAVFKKFNWRYLVIDEAHR
IKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTN
NCLGDQKLVERLHTVLRPFLLRRIKADVEKSLLPKKEVKMYVGLSKMQREWYTKILMKDI
DILNSAGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMAVLDKLL
PKLKEQGSRVLIFSQMTRMLDILEDYCMWRNYGYCRLDGQTPHEERQVSINVFNEPNSPK
FLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITENT
VEERIVERAEMKLRLDSIVIQQGRLVDPSMNKLGKDEMLSIIRHGATHVFASKESEITDE
DIDVILERGEKKTMEMKEKMSTLGEGSLRNFTMDTENSVYNFEGEDYREKKKVITNWIEP
PKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYR
KTIGYKVPRNPDLPNAAQVQKEEQAKIDEAEPLNEEELEEKENLLSQGFTIWNKRDFNQF
IKANEKWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQR
RISIKKALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDEL
RQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPRNSSA
QKRKQDGTPDGRGRKKKLKL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagacggagggaagcgtggacaaacagcgggaagaagaggctcgagttgataca
acaacagcagcaacaacaacaataacaacaatcacaacaacacaggatggtgtttcaggt
gctgaagcagcagcgcaggatggaggtgagcagtcgtcctctcccgtggctgaaaaggtg
aaggtcgagcagtcagcaggttatgaagagaaagtgaaaacggaccggaccaacagattc
gagtacctgctgaagcagacggaggtgtttgctcactttattcagcctgctgcccagaag
acccctacctctccgctgaagatgaagcccggccgtcctcgcattaaaaaggacgagaaa
cagaacctcctgtctgccggagataaccgtcaccgtcgcactgagcaggaggaggatgag
gagctgctcagtgagagcagtaaggctgccaacgtgtgcacacgctttgacgagtctcca
tcctatgtgaaaacgggcaaactccgagattatcagatccgtggactgaactggctgatt
tcactgtatgagaatggaatcaacggcatcctggctgatgaaatgggtcttggaaagact
ctccagaccatttctctcctgggctacatgaaacactacaggaacatccccgggcctcac
atggttctggttcccaagtccacgctgtataactggatgaacgagtttaagcgctgggtg
ccctcgctccgagccgtctgcctcatcggagaccgggacgagaggacggctttcatccgt
gacactttgttgccgggagagtgggacgtgtgcgtcacttcctatgaaatgctcatcatt
gagagggctgtctttaagaagtttaactggagatacctggtgattgatgaagctcatcgt
atcaagaacgaaaaatcaaagctgtcagaaattgtgcgagagttcaagactaccaaccgg
ttgctgctcacaggaacccctctacagaacaatctacacgagctgtgggccctgctcaac
ttcctcctgcctgatgtcttcaactcctccgaggactttgattcctggtttgacacaaat
aactgtcttggagaccagaaactggttgagcgtttacacactgtattgcgtccttttctg
ctgaggcgtatcaaagctgacgtggagaaatcgctgcttccgaaaaaagaggtcaagatg
tacgttgggctcagcaagatgcagagagaatggtacactaaaatcttgatgaaggacatt
gatatcctgaactcggcagggaagatggataagatgcgtctgctgaacgttctgatgcag
ctcaggaagtgctgtaatcacccgtacctgtttgatggcgcagagcccggcccaccgtac
accactgacctccatcttgtcgtcaacagcggcaagatggccgtcctcgataaactgctg
cccaagctgaaggagcaaggttctcgtgtgctgatcttcagccagatgaccaggatgctg
gacattctggaagactactgtatgtggcgtaactatggttactgccgcctggatggacaa
acgcctcacgaggagagacaggtctccatcaatgtctttaatgagcccaacagccccaag
tttctgtttatgctgagcactagggctggtgggctggggattaacctggctacagccgat
gtggtcattatttatgactctgactggaatcctcaagtggacctgcaggccatggatcgc
gctcacagaattggtcagaagaagcaagtccgcgtgttccgtttcattacagagaacacc
gtagaggagaggatagtggaacgtgccgaaatgaaactacgtctagactccatcgtcatc
cagcaaggtagattggttgatccaagcatgaacaagttgggcaaagacgagatgttgtcc
atcattcggcacggcgccactcacgtctttgcttccaaggagagcgaaattactgatgaa
gacattgatgtcatcctggagagaggcgaaaagaagacaatggagatgaaggagaagatg
tccacacttggtgaaggctctctgaggaatttcaccatggacacagaaaacagcgtgtac
aacttcgaaggcgaggattacagagagaagaaaaaggtcatcaccaactggatcgaacca
ccaaaaagggagcgtaaagccaactatgctgttgatgcctacttcagagaggccctacgt
gtcagtgagcctaaagcaccaaaggctcctcggcctcccaaacagcccaacgttcaagac
ttccagttcttcccacctcggctttttgagctgctcgagaaggagatcttgtactacagg
aaaactattggctacaaggtgccaaggaatcctgacctacccaatgctgctcaggtgcag
aaggaagagcaggcgaagatcgatgaagcagaacctctcaatgaggaagagctggaggag
aaggagaacctcctgtcgcagggcttcaccatttggaacaagcgagatttcaaccagttc
attaaggctaatgagaaatggggaagagacgatattgagaacatcgcccgtgaagtggaa
ggcaaaacgcctgaagaagtcatggaatattcagctgtgttttgggagcgctgcaatgag
ctgcaggatattgagaagatcatggctcagattgagagaggtgaagccaggattcagagg
aggatcagcatcaagaaagcactggactcaaagattggccgttacaaggcaccattccac
cagctaaggatttcttacgggaccaacaaggggaagaactataccgaggaggaggacaga
ttcctcatctgcatgctgcacaaactgggcttcgacaaggagagtgtttacgacgagctg
cgccaatgtatccgcaactcgcctcagttccgcttcgactggttcctcaagtctcgcaca
gctatggagttacagaggagatgcaacaccctgattactctaatcgaacgtgagaacatg
gagctggaagagcgggagaaggcagagaagaagaaacggggtcctcgcaattcttccgca
cagaaacgtaagcaggatgggaccccagacggccgcggtcggaagaagaagctgaagttg
tga
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integrated database retrieval system
