Neoarius graeffei (lesser salmon catfish): 132889966
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Entry
132889966 CDS
T10798
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04150
mTOR signaling pathway
ngra04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
132889966 (lrp5)
04150 mTOR signaling pathway
132889966 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132889966 (lrp5)
Membrane trafficking [BR:
ngra04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
132889966 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
EGF_LRP2
SGL
DUF5050
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
132889966
NCBI-ProteinID:
XP_060782751
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All DBs
Position
8:complement(93886568..93969367)
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AA seq
1346 aa
AA seq
DB search
MKCLFSDLLLFCSVTLCVGSPLLLFANRRDVRLVDAESVRADSAVLVSDLEDAAAVDFLF
SESLVFWTDVSEEAIKQTFYNQSSNAVKEAVLGSGQKVVVSGLDSPDGLACDWLGRKLYW
TDSETNRIEVANLDGTSRKVLFWQDLDQPRAIALNPAQRYMYWTDWGEEPRIERSGMDGS
SRMVIIQEDIYWPNGLTIDLDEQKLYWADAKLSFIHKANLDGTARETVVEGTLTHPFALT
LFDETLYWTDWQTRSIHACNKHTGNNRREILNGIYSPMDIQVLGQKRQPYIHTPCSDRNG
GCSHLCLLSPSPPYYSCSCPTGVKLREDGKTCRPGTNGCTESNGGCSHLCFNGPRGITCA
CPMGLELLSDLRTCVIPEAFLLFTNRADIRSISLGTNSNDVAIPLSGIKEASALDFDVAE
NRIFWTDVSTKTISRAFMNGSGVEAVIEFGLDYPEGMAVDWMGRNIYWADTGTNRIEVAR
LDGQYRQVLVCKDLDNPRSLALDPANGYMYWTEWGGRPRIACAHMDGTNIITLVDKVGRA
NGLTIDYVDQRLYWTDLDTCMIESTNMQGLQREIVADDLPHPFGLTQYRDFIYWTDWNLR
SIERADKRSGQNRTVVQGQLEYVMDILVFHSSRQDGSNQCSHNNGNCAHLCLATPSGAQC
RCASHYTLQPNGHNCSSPSSFLLFSQKSSISRMVLGEQSPDMILPIHVLRNLRAISFDPL
KRFIYWIDGKQSIRKARDDGSQAATVVSPSPTQPLKQPHDLSVDPFSRTVYWTCENTNTI
NVQRMDGQIVGEVVRDDVDKPRAIVVNAEKGYMYFTTLQDRSAKIEGASLDGTERESLFT
TGLIRPVALALDNKLGKLFWVDADLKRIESSDLSGANRIVLQDSNILQPIGLTVLGDHLY
WIDKQQQMIERVDKRSGDRRTRIQGRIQSLTGIHAVEFMETDEFSAHPCSRDNGGCSHIC
IAKGDGTPRCSCPIHLVLLQNLLSCGDPPTCSADHFTCATGEIDCIPMAWRCDGIAECAD
HSDEMNCPVCSEQQFQCHGGQCLDSKLRCNGEQDCTDGSDELDCHSICMPNQFRCKNNKC
ISKKQQCDSYPDCTDDSDELFCDFSPSSGDERHTNTIGPVIGIILSVFVLGGMCFVCQRV
VCRRYKGPSGGFPHDYITGTAHVPLNFISTSNTQHANCTGISCGKSIVSSVSLMGSSSSG
APLYDRNHVTGASSSSSSSTKAAFYPQILNPPPSPATDRSLYNTEVFYSSNSPSTTRSYR
PYVMRGGAPPTTPCSTDVCDSDYTPSRWKSNKYYMEVNWDSEPCPPPPTPRSHYMSAEES
CPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtttattctcggatctgctgcttttctgctccgtgactctgtgtgtcggttct
cccctgctgctctttgctaatcggcgtgatgtgcgcctggtggacgctgagtcagtgcgt
gctgactcggccgtgttggtcagtgacctggaggacgcggccgctgttgacttcctgttc
tctgagagtctcgtgttctggactgacgtcagtgaagaggccatcaaacagacgttctac
aaccagagcagcaacgcggtgaaagaagcagtactgggttcgggtcagaaggtggtggtt
tcgggtctggactctcccgatggtctggcatgcgattggcttggaaggaaactctactgg
accgactctgaaacgaaccgcatcgaggtggcgaacctggatggaacgtcacggaaagtt
ctgttctggcaggatctggatcagcctcgggccatcgcactcaatcctgcacagaggtac
atgtactggacggattggggtgaggagccgaggatcgagcgctcagggatggacggcagc
agcaggatggtgattatacaggaggatatttattggcccaacggactgaccatcgatctg
gatgagcagaagctgtactgggccgacgccaaactcagcttcatccacaaagccaacctg
gatggcactgcacgagagacggtggtggaagggacgctcacacacccgtttgccctcaca
ctctttgacgagacgctgtactggacggactggcaaactcgctcaattcacgcctgcaac
aaacacacgggtaacaaccggagagaaatcctcaacggcatctactcacccatggacatc
caggtgctgggacagaagagacagccttacatccacacgccctgcagcgacagaaatgga
ggatgttctcacctgtgtctgctctcgccctcaccaccgtactacagctgctcctgtccc
actggcgtcaaactgcgcgaggatggcaaaacctgcagaccaggcactaacggctgtacc
gagtccaatggtggctgcagtcacttgtgtttcaatgggccgcgtggtatcacgtgcgcg
tgtccgatgggtctggagctcctcagtgatctgcgcacgtgtgtcattcctgaagcgttc
ctgctcttcactaaccgcgcagacatccgcagcatctcattgggaaccaacagcaacgat
gtcgccatcccactcagcggcattaaagaggcctcggcactcgacttcgacgtcgcagag
aaccgaatcttctggactgacgttagcaccaagacgattagccgtgcgtttatgaatggc
agcggtgtggaggcagtgatcgagtttggtctggattatcccgagggaatggcagtggac
tggatgggcaggaacatctactgggccgacaccggaaccaaccggatcgaggtggcccgt
ctggatggtcagtaccgccaggttctggtgtgcaaagacctggataaccctcgttcgcta
gcgctggatccggctaatgggtatatgtactggacagagtgggggggtcggccccggatc
gcctgcgctcacatggacggtaccaacatcatcactctggtggataaagtgggccgagcc
aatggtctgaccatcgactacgtggatcagagactgtactggaccgacctggacacgtgt
atgatcgagtccaccaacatgcagggtctgcagcgtgagattgtggctgatgatctgcca
cacccgttcggtctcacgcagtaccgggactttatctactggacggattggaacctgcgc
agtatcgagcgagcagataagcggagcggtcagaaccggactgtggtgcagggacagctg
gagtacgtgatggacatcctggtattccactcgtcacgacaggacggatccaaccagtgc
tcacacaacaacggcaactgtgctcacctgtgcctggccacgccctcaggggcacagtgt
cgctgcgcctcgcactacacactgcagcccaacggacacaactgcagctctccctccagt
ttcctgttgttcagtcagaagagttctatcagtcggatggttctgggtgagcagagcccg
gatatgattttgcctatccatgtgttgaggaatctgcgagcgatcagctttgacccgctg
aagcgcttcatctactggatcgatgggaagcagagcatccgcaaggcccgggacgacggc
tctcaggcggcgacagtggtgtccccgagccccacacagcctctcaaacagccacacgat
ctgagtgtggacccgttcagccgcacggtatactggacctgcgagaacaccaacaccatc
aacgtgcagcgcatggacgggcagatcgtcggggaagtggtgcgagacgatgtggacaaa
cccagagccatcgtcgtcaatgccgagaaaggctacatgtatttcaccacactgcaggat
cgctcggcgaagatcgagggcgcgtctttagacgggacggaacgcgagtctctgttcacg
actggattgatccggcccgtggcactcgctctggataacaaactgggcaagctgttctgg
gtggatgccgacctgaaacgcatcgagagcagcgatctgtccggagccaatcggattgta
ctccaggactccaacatcctgcagccgatcggtctgaccgtcctcggagatcacctgtac
tggatcgataagcagcagcagatgatcgagcgcgtggacaaacgcagcggggacaggagg
acacggattcagggacggattcagtctctgactggaattcatgctgtggagttcatggag
acggacgagttctcagcccatccttgttcccgtgacaacggaggatgctcacacatctgc
attgccaaaggagacgggacaccgcgatgctcgtgtcccatacacctggtgctgctgcag
aacctgttgagctgcggagacccgcccacatgctcggcggatcatttcacgtgtgcgacg
ggtgagatcgactgcatcccgatggcatggcggtgtgacggcattgctgagtgcgcggac
cacagcgatgagatgaactgccccgtgtgctcggagcagcagtttcagtgtcacggtgga
cagtgtctcgacagtaaactgcgctgcaatggagaacaggactgcaccgacggatccgac
gaacttgactgccacagcatctgcatgcccaatcagttccgctgtaaaaataataaatgc
atttcaaagaagcagcagtgcgactcctaccccgactgcacagacgattcagatgagctt
ttctgcgatttctcaccgtccagtggtgacgagcgtcacaccaacaccatcgggccagtg
attgggatcatcctgtcggtgttcgtgctgggtgggatgtgctttgtgtgtcagcgtgtt
gtgtgtcgccgctacaaagggccgagtgggggattccctcatgattacatcaccgggacc
gcccacgtccctctgaacttcatcagcaccagtaacacacaacacgctaactgtacagga
atatcatgtgggaagtctatcgtgagctcagtcagtctgatgggcagcagcagcagtgga
gctcctctgtatgacaggaaccatgtaactggagcttcatccagcagttcatccagcacc
aaagctgcattttaccctcagattctgaatcctcctccgtcaccagccacagatcgttca
ctctacaacactgaagtgttttattcgtccaacagcccgtccacaaccaggtcttacagg
ccgtatgtgatgcgtggcggggctccacccaccacgccctgcagcacagatgtgtgtgac
agcgactacacgccgagccgctggaagagcaataagtactatatggaggtgaactgggac
tcggagccgtgcccgcccccgcccaccccacgcagccactacatgtctgccgaggagagc
tgtcctccatcgccctccaccgagcgcagctacttccacctgtgtccacctccaccctca
ccctgcaccgactcgtcctga
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