Neoarius graeffei (lesser salmon catfish): 132890386
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Entry
132890386 CDS
T10798
Symbol
rnf130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132890386 (rnf130)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132890386 (rnf130)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132890386 (rnf130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
PspB
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
132890386
NCBI-ProteinID:
XP_060783184
LinkDB
All DBs
Position
8:1832191..1897901
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AA seq
437 aa
AA seq
DB search
MQKKRRTSSSCMALFLCCILLSLLLPRCVSCAGTDKTDKTVVNKEEYYSATINATVQDSR
GNTKHVISKEDGRYGQNSPKSEVKGIIIAPAAVNGVVDMQGCCPYTRFIVPPKTTHWIAL
LQRGKCTFKEKILKAAAFNASAVLIYNNSSKEDTVTMAHEGTGVTVAVMITESLGKDLLI
FLEKNETVWVLVSVGSRGPVKNLNRGSLVFVSISFIVLMIISSAWLIFYFIQKIRDTNAR
DRSQRRLGDAAKKAISKLTTRTVKRGDKETEPDFNHCAVCIEGYQLNDVVRILPCKHVFH
KVCVDPWLNEHCTCPMCKLNILKALGIMPNLQCVDNVAFDMGRMTRTQSSSQRVALMDVT
SETNINVEPIARSGSSQLLSESELSHTHTHRSGDINIAVTKEWFIVGSFAVLSVLTLCYM
IIRATGNNYDNSALDMA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaaacggagaacatcttcatcctgcatggctttgttcctctgctgcatcctt
ctctcgctcctcctgcccaggtgtgtgtcctgcgcaggtacggacaaaactgacaaaacg
gtggtgaacaaagaggaatattacagcgctacaattaacgccacagtgcaggacagcagg
ggaaacaccaagcacgtgatatcaaaggaggacggcaggtacggacagaactcgcccaaa
tcggaggtgaaggggattataattgcacctgctgctgtcaatggagtggtggacatgcag
ggctgctgtccgtacactcgtttcatcgttcctccgaaaacgacacactggatcgctctg
cttcagagagggaagtgcacgtttaaggagaagatcctgaaggctgccgcctttaatgcc
tccgctgtgctcatctacaacaacagctccaaagaggacaccgtcaccatggcacatgaa
ggcactggggtcacggtggcggtgatgattaccgagtcactggggaaggatctgctgatt
ttcttggagaagaacgagacggtgtgggttttggtgtcggtcggttctcgaggtccggtg
aagaacctgaaccgcggctcgctggtgtttgtctccatctccttcatcgtcctgatgatc
atctcctccgcctggcttatcttctacttcatccagaagatcagagacacgaacgcacga
gatcgaagtcagcgacggcttggagacgctgcgaagaaagcgatcagtaaactgacgact
cgcacggtgaagcgaggcgataaggaaacagagcctgattttaatcattgtgctgtgtgc
atcgaaggataccagctgaacgacgtggtgcggatcttaccctgcaaacatgttttccac
aaggtgtgtgtggatccgtggctgaatgaacactgcacctgtcccatgtgtaaactcaac
atcctcaaagctctgggcatcatgcccaacctgcagtgtgtagataacgtggcgttcgat
atggggcggatgacacgcactcagtcctccagccagcgggtggcgctgatggacgtgacg
tctgagacaaacatcaatgtggagccaatcgcacgctccgggtcatctcagctgctgtcc
gagtcggagctgtcacacacacacacacaccgcagcggggacatcaacatcgccgtcacc
aaagagtggtttattgtgggcagcttcgccgtcctcagtgttttaacgctgtgctacatg
atcatcagagccaccggcaacaactacgacaactcggcattggacatggcgtga
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