Neoarius graeffei (lesser salmon catfish): 132890480
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Entry
132890480 CDS
T10798
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132890480 (rnf20)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132890480 (rnf20)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
132890480 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
BRE1
zf-RING_5
zf-RING_2
zf-rbx1
SOGA
Motif
Other DBs
NCBI-GeneID:
132890480
NCBI-ProteinID:
XP_060783337
LinkDB
All DBs
Position
8:15405864..15472583
Genome browser
AA seq
1006 aa
AA seq
DB search
MSAQKRPCDPSSSSGPPLEKRRDRDGGDGGEGLSTGASNAVETVIKLGGVSNSEEQDIKA
LQVKNRKLGEALDQRQVIEDELRERVERLETRQATDDASLLILNRYWNQFDDNMRLIARR
YDQSGSQPVDSQPGEGRSLKPGTPEPDGDSNQERAKDRGPQGEGASSFLAMLASSSSEEM
EAELQERVESSRKQASCVVEICESLKITVDQLKKDLHSDSDGSLVEITTRLNTLLANENE
CLRQLTDDLKQKHSHMTSESRSLARAASRADNRISELQVSIEELQWDTEKIRRRENRLNT
HLGEVLERLNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENRELADNRLSELQKLQQ
DLQTVVQENTNMKMELMCRAEGMVRETAEYRCLQSQFSVLYNESLVLKAQLDETRARLNT
TRAARLRQLDHMENDEVSLQRKVRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGP
INREMRHLISTLQTHNQQMKGEVVKFKLRLREAQQELNQLRATKGNPAVQSQSSTEMDIK
EEPASVLTSTASEAAVKAGSDHDSATPTTTGVSVKTEPGTEPEGTVKEEEKEKDKEKEKE
EKKEKDKDQKEREKVTRVAVKEEKEKPGTSSSQSDDTPAERCAVIGGPKRKEVEQLKIVR
VELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKSKAEAEELRQRLRDLEERERR
EGKKMADEEALRKIRLVEEQIDILNKKLSLAKQEEDALLSEMDVTGQAFEDMQEQNIRLM
QQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQVDAQLQVVRKLEEKER
LLQGTISAAERELNLRTQALDMNKRKAQESALLSEELRAQLEGVQQRLKEVREEVIENSI
SREKESFNARRAQEDISKLRRKIEKAKKPAESMRNGDEILNEEINEYKARLTCPCCNSRV
KDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcagaagcggccgtgtgatcccagcagctcgtctggtcctcccctggagaaa
agaagagacagagacggaggagacggaggcgagggtctgagcacaggggcaagcaatgct
gtggagacggtcatcaaactgggaggcgtgtccaactcggaagaacaggatattaaagca
ctgcaggtgaaaaacagaaagttgggggaggccttggaccaaagacaggttatcgaagat
gaattgagggaacgagtggaaaggcttgagactcgccaggctaccgatgatgctagctta
cttatccttaacagatactggaaccagtttgacgacaacatgaggttgattgctcgccgc
tatgaccaatcaggaagccagccagtggatagccagcctggtgaggggcggagcctaaag
ccagggacaccagagccggatggagattctaatcaggagagagcaaaggacaggggtcca
caaggagagggagcgagctcgttccttgccatgctggccagtagtagcagtgaggaaatg
gaggcggagctacaggagagggtggagtccagccgtaaacaggccagttgtgtggtagag
atttgtgagagcttaaagatcactgtggatcaacttaagaaggacctgcactctgactca
gatggtagcctcgtggaaatcactactcgtctcaataccttactggccaatgagaatgaa
tgtcttcgccagctgacagatgacctcaagcaaaaacatagtcacatgaccagcgagtct
cgttccctggcgcgtgctgcgagtcgtgctgacaacagaataagcgaactgcaggtgtca
atagaggaactgcagtgggacacggagaagatccgtcgcagggaaaaccgcctgaacaca
catctaggggaggtgctggagaggctcaatagtaaaggctataaagtatgtggcgaggcc
agcagtgtgtgtgggaccatcaccatcaacaagagaaagtttgaggagatgaacagcgag
ttggaggagaaccgggagttagcagataaccggcttagcgagctgcagaaattacagcag
gacctacagacagttgtccaggagaacaccaacatgaagatggagctcatgtgcagggca
gagggaatggtgagagagacagcagagtatcggtgtctgcagtcccagttctctgtgctt
tataacgaatctctggtcctgaaagcccagctggatgagaccagagctcgcctgaacaca
accagagctgcccgccttcgccagctcgaccacatggagaatgacgaggtgtctctgcag
cgtaaagttcgtactgaagtcattcagctggaggacactctggctcaggtgcgcaaggag
tacgagatgctgaggattgagtttgagcaaacactcgctgccaacgagcaagcaggcccg
atcaatcgggagatgcgtcaccttatcagcactctgcagacgcataaccagcagatgaag
ggagaggtggtcaaattcaagctcagactccgagaggcccagcaagagctcaaccagctc
cgtgctacaaagggtaatcctgctgtccaatcccaatcaagcacagagatggatataaaa
gaagaacctgcctctgttttaacgtctaccgcctctgaagctgcagtgaaagcagggtca
gatcatgactcggccacgcccactaccactggagtgtcggttaagactgaaccgggaact
gaacctgaaggcacagtaaaagaagaagagaaggagaaagacaaggaaaaagagaaagag
gagaagaaagaaaaagacaaagatcagaaggagagagagaaggtaactcgtgtggcggta
aaggaggaaaaggagaaaccgggcacgagcagtagtcaatcagacgacacgccagctgaa
cgctgcgctgtgattggagggccaaagaggaaggaagtggagcagctgaaaatcgtcagg
gtggagcttaagaaagcccaagagtctcagagagagatgaagctcttgctggacatgtac
cgctctgccccaaaagaacagagggacaaagtgcaactgatggctgcagagaaaaagtcc
aaagctgaggcagaggagctccgtcagcgcctgcgggatctggaggagcgggagaggagg
gaaggaaagaagatggctgatgaggaagctctgagaaagattcgcttagtggaggagcag
attgacatcctcaacaagaaactctcccttgccaagcaggaggaggacgccttgctgagc
gagatggacgtcaccggacaggcctttgaggacatgcaggaacagaacattcgcttgatg
cagcagctccgcgagaaagacgacgccaacttcaagctcatgagcgagcgcatcaaatcc
aaccagatccacaagctcctgaaagaagaaaaagaagagctggcggaccagctgctcaca
ctgaaaacacaggtggacgctcagctgcaggtggtgaggaagctggaggagaaagagcgc
ctccttcagggcaccattagtgctgcagagagagagttgaacctgcgcacacaagccctg
gacatgaacaaacgcaaggcccaagagtctgcgttactgtcggaggagttacgggctcag
ctggaaggagtgcagcagcgattgaaagaagtccgtgaggaggtgatcgagaacagcatc
tccagagagaaagaatccttcaatgcccgccgtgcgcaggaggacatctccaaactgcgc
aggaagatcgagaaagccaagaagcctgccgagagcatgcgaaacggtgacgagatactt
aatgaggaaattaatgaatacaaggcccgtttgacgtgtccgtgctgcaactctcgtgta
aaggatgccgtgttgacgaagtgcttccacgtcttctgcttcgagtgtgtgaagacgcgt
tacgatacacgccagaggaagtgcccgaagtgcaacgccgccttcggcgccaacgatttc
caccgcatttacatcggatag
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integrated database retrieval system
