Neoarius graeffei (lesser salmon catfish): 132890544
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Entry
132890544 CDS
T10798
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03013
Nucleocytoplasmic transport
ngra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132890544 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
132890544 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132890544 (thoc2)
03041 Spliceosome [BR:
ngra03041
]
132890544 (thoc2)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
132890544 (thoc2)
Spliceosome [BR:
ngra03041
]
Complex C
Other components
EJC/TREX
132890544 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132890544 (thoc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
132890544
NCBI-ProteinID:
XP_060783476
LinkDB
All DBs
Position
8:complement(26709296..26918625)
Genome browser
AA seq
1552 aa
AA seq
DB search
MAALILPTDWIKNWEKSGKNEFLQLCRDLAGKADDEVFLKDLQMALYELCWHVVHGGLKV
DVAASLLADVMELREDMPSVLADVFCVLDIETGCLEEKHKRDHFTQLVGACLCCVSEAVL
KERLDPDTLESLGLIKQAQQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLVTELGQDL
SGNVTSRLVLESIKSLIGCFNLDPNRVLDIILEVYECRSDQDEFFIPLIKSYMCEHQTLC
HILGFKFKFHQEPNGETPSSLYHVAAALLQHNLIALEDLYVHLLPLDSSIVEEHKREILE
AKQIARKLTMVVVPSEKSDDKEKEKDKEEEKNDKPPNNQKLGLLEALLQIGDWQHAQSIM
EQMPPFYATSHKSIAVALCQLLHLIVEPLYRRAGVPKGAKGCVLKLLRNRQAPPPVESFE
DLSKDVFTMLGYLGPHLSHDPILFAKIVRLGKSFMKEHQSESKQDAKEKMDTLLSCFLSI
ADQVLLPSLTLMDCNACMSEELWGFFKLFPYQHRYRLYGQWKNETYSSHPLLVKVKAQTV
DRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQWYDNLITPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELGGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTAEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVIFSEGGEKHLKLVGKLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDVLCNQFHTPHDAAFFLSRPMYAHQIMAKYDELKKAEKGNRQQQKV
HKYIAACEQVMTPVHEAVVSLHLPRVWDDLRPQFYATFWSLTMYDLSVPHSAYDREVNKL
KMQIKAIDENTEMPLNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCVFSAIDAVYCARFVELVHQQKTQNFCTLLCYDRVFSDIIY
TVASCTENESRRYGRFLCCMLETVTRWHSDKAIYEKECGNYPGFLTIFRASGFDGGNKAD
QLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPFYPKVLNLGQALEC
RVHKICQEEKEKRPDLYALAMGYSGQLKSRKAHMVPENEFHYKEPASTANPGALQNGPGS
SSKPGTATPASANTGKNEEGAAEDTDKSKDKSQVAQKTACKNLTMANKASSSNGSSTPNS
IKGSKEKEDKEKSVKEKKEKKEKTAASTPETKPGGKEKQKEEKMGDAKDKVPKAEKDKRK
DDKKDEKIKSDAKAADKESSKERDVAKEGKLKESSKGEKNVASLKSPVPRSEGIESEREQ
KRRKLDTHSSPSHSSAVKDNLNDFKDSAIKQHHANNNTGLTKSEAEKKESDKSRDRSKER
DKKEERKDRKRDYSNSDREMSQEAKRRKDENGTSTSKHSKSASPPDSPRSNDKDNSKRSK
STSKDKSDLAKTEKTSGGKKESRHDKEKSEKKRDSTGAKEDKKHHKSSEKHR
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgatcctccctactgattggatcaaaaattgggaaaaatccggaaaaaat
gagttcctgcagctgtgtcgggacctggcaggcaaagcagatgatgaagtgttccttaaa
gatctccagatggccctgtacgagctctgctggcacgtggtccacggcggtctcaaggtt
gacgtggctgctagccttctggctgatgttatggagctgagggaggacatgccttctgtt
ttagcggatgttttctgtgtattagatattgagactggatgtctggaggagaaacataaa
cgagaccattttacccagctggtgggagcgtgtttgtgttgtgtttctgaagctgtcctg
aaagagaggctcgaccccgacacgctcgagtccctcggcttgatcaaacaggcacagcag
ttcaaccagaagattgtcaaaatcaagactaagctgttttataaacagcagaagttcaac
ttgttgcgtgaggagaatgaaggctatgccaagctagtgaccgagctgggccaggatctc
tcaggaaacgtcaccagccgtcttgttctggagagcatcaagtctttaataggatgtttc
aacttggacccaaaccgtgtgttggacataattttggaagtgtacgagtgccgttcagac
caggacgagttcttcatccctctgatcaagtcatacatgtgtgagcaccagaccctgtgc
cacatccttggcttcaagttcaaattccatcaggaaccgaatggagaaacgccatcgtct
ttgtaccatgttgctgctgcacttctccaacacaatctcatcgctctggaggatctctac
gtacatctgctcccgctggactcctccatcgtggaagagcacaaaagggagatcctggag
gccaagcagatcgcccgcaagctcaccatggtggtggtgccctcagaaaagagtgacgat
aaagaaaaggagaaggacaaagaagaggaaaagaatgataagccacccaataaccagaaa
ctgggtctgctcgaggcgctgctgcagatcggagactggcagcatgcacagagcattatg
gagcagatgccacccttctacgccacctctcataaatccattgctgtagcattgtgccaa
ctgctgcacctcatcgtggaacctctgtaccgcagggctggggtcccgaaaggtgcaaaa
ggctgcgtgttgaagctgctgaggaacaggcaggctcctcctcctgtcgagagtttcgag
gatctctcgaaggacgtgttcaccatgctgggttatctgggcccgcacctttcccatgat
cccatccttttcgccaagattgtgcgtctgggcaaaagcttcatgaaagagcaccaaagt
gaaagcaagcaagatgccaaggagaaaatggacacactgctcagctgtttcctcagcatt
gctgaccaggtcctgctgccctcgctcacactcatggactgcaatgcctgcatgtcagag
gagctctggggcttctttaagctcttcccttaccagcacaggtatcggctttacgggcag
tggaaaaatgagacgtacagcagccacccgttgttggtgaaggtgaaggctcagacagtg
gacagagccaagtacatcatgaagcgactgaccaaggaaaacgtgaagccgtcggggagg
cagattggcaagctgagccacagcaaccccaccattctctttgattacattctctcccag
atccagtggtatgacaacctcatcacccctgtggtggactctctgaaatacctcacctct
ctcaactatgatgtactggcttattgcattattgaagctttagctaacccggagaaagag
aagatgaagcatgatgacaccacaatttcatcttggcttcaaagtctcgccagtctttgt
ggagcggttttccggaagtacccaatcgagttgggaggtttgctgcagtatgtgaccaat
cagctcaaggcaggaaagagctttgacctgttgatcctgaaggaggtggtgcagaaaatg
gctgggattgagatcacagatgaaatgacagcagagcagctggaggccatgactggagga
gagcagcttaaagcagagggaggatactttggccagatcaggaacacaaagaagtcatct
cagcgactgaaggacgctctgctggaccacgagttggcgcttcctctttgcctgctgatg
gctcagcagaggaacggtgtcattttctccgagggaggggaaaaacacctcaaactagtg
ggcaaactctatgatcagtgtcacgatacactggtgcaatttggtggctttttagcatcc
aacctgagcacggaggattacatcaagagagttccttccatagacgtgctttgtaaccag
ttccacactccccatgatgctgccttctttttgtcccgcccaatgtacgcccatcagatt
atggccaagtacgatgagctgaagaaggccgagaagggaaaccggcagcagcagaaggtc
cacaagtatatagcggcctgcgagcaggtgatgacgcctgttcacgaagctgtcgtctcg
ctccacctacctcgagtgtgggacgacctgcgcccgcagttctatgccaccttctggtca
ctcaccatgtacgacctgtctgttccccatagcgcttatgaccgcgaggtcaacaagctc
aagatgcagattaaggccatcgatgagaacactgagatgccactgaacaaaaagaagaag
gagaaggagcggtgcactgcactgcaggacaagctgctggaggaggagaagaagcaactg
gagcatgtgcagagagtcctgcatcgcctcaagctggagaaggacaactggttactcgct
aaatcaacaaagaatgagaccatcactaaattccttcagctgtgtctgttcccacgctgt
gtcttttcagccattgatgccgtctactgtgctcgtttcgttgagcttgtgcaccaacag
aaaacacagaacttctgcacactactttgttatgatcgcgtgttctctgatatcatctac
acagtggcgagctgtacagagaacgagtctcggcgttatggccgcttcctgtgctgcatg
ctggagacggtgactcgatggcacagtgataaagccatctatgaaaaggagtgcggcaat
tacccagggttcctgaccattttccgagccagtggttttgacggaggaaataaggcggac
caacttgactatgagaacttcagacatgtcgttcacaaatggcattataagctaactaaa
gcctcggtgcactgtctggagacgggcgagtacacccacattcgcaacatcctcattgtg
ctgaccaagatcctgcccttctacccaaaagtgctgaatctgggccaggcgctcgagtgc
cgagtgcacaagatctgccaggaggagaaggagaagaggcctgacctctatgctttagcc
atgggctactctggccagttgaaaagtaggaaagctcacatggtgcctgagaatgagttc
cactacaaggagcctgcgagcaccgccaaccctggcgccctgcagaacggcccgggcagc
tccagcaagcctggcactgccactcctgcctctgccaacactggaaaaaatgaggagggg
gctgccgaggacacagacaaatctaaggacaaatctcaggtggctcagaaaacagcctgc
aaaaacctaaccatggcgaataaagcaagcagcagcaacggcagcagcacgcctaacagc
atcaaagggagcaaagaaaaggaggacaaggagaagagtgtgaaggagaaaaaggagaag
aaggagaagaccgctgccagcactccagagaccaagccaggagggaaggagaagcagaag
gaggaaaaaatgggtgatgccaaggacaaggtgcccaaggctgagaaggacaagaggaag
gatgacaagaaggacgagaagatcaagagtgatgctaaggcagcagacaaagagtcatcc
aaggagcgagatgtggccaaggagggcaagttaaaggaaagcagcaagggcgagaaaaat
gttgcgtccctcaagtcccctgttcccagatcagaaggaattgagtctgaacgggaacaa
aaaagacgaaagctcgacacacattcttcgccctcacactcctctgcagtaaaggacaat
ctcaatgacttcaaggactcagccatcaagcagcatcatgccaacaacaacacgggcctg
accaagagtgaagccgagaagaaagagtccgacaagtccagggaccgctccaaagagagg
gacaagaaggaggagaggaaggaccgcaaacgagactactccaacagcgaccgcgagatg
agccaggaagccaagcgccgcaaagacgagaatggaacaagcacctcaaagcatagtaag
agcgccagtccgcctgattcgccccgctccaatgacaaggacaacagcaaacgctccaaa
tccaccagcaaagacaagagcgaccttgccaaaactgagaagacctctggaggcaaaaag
gaatccaggcacgacaaagagaaatctgaaaaaaagcgagacagtaccggtgcaaaagaa
gataagaaacaccataaatcatcagaaaagcacagataa
DBGET
integrated database retrieval system
