Neoarius graeffei (lesser salmon catfish): 132890549
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Entry
132890549 CDS
T10798
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
132890549 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132890549 (atrx)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132890549 (atrx)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
132890549 (atrx)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
132890549 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
132890549
NCBI-ProteinID:
XP_060783489
LinkDB
All DBs
Position
8:27298519..27415813
Genome browser
AA seq
2056 aa
AA seq
DB search
MSTENGRSSKLTALVTKLHESLDHSPEEKTATSQVDEISSGKMASSDSNLNEEIMEQVQP
SCSTEVPKATPRSKRKPAVVTKHTAVNEAESADECEQDCVADNTNDATIDMEEIPEDVVV
VKPEPVNNEGKDEFKGPEFRNKGGSKVKEESQRRRPDEHLEEIRSSRVNCTACGQQVNHF
QRDSVYQHPVLQVLLCKSCFKYYMSDDISKDEDGMDEQCRWCAEGGNLLCCDYCSNAFCK
TCILRNLGRKELSGIMNDDHKWHCYVCQPEPLQDLVAACEKVLRNLECMKKPKGDHDKPR
RDSMKHKQGKVKNSALNGKDVNFDGSGTLTFSYKTLKVPKELVKKTKKLIETTNGLNSTF
VQFIQQEPVYLGDNVVRHRHLKAFRSVLADLKKVHASLEEALDEEFRNLEVCSREENRSA
VNPNVSNTVPNSEHLDQSQDTRVVLDGTTDQVPVASEDNMDEENTVPADVEMAEEAVSSA
EIPANEFVENEATANVDNGEPDCEDDGSAAGEVSLDKDIVSIPPSVPEELFEMVESLSDC
VKQEGEKDSLDSPDSTSSKTSLSDGKSTESTKRSAKMSKKLVVKLTPIPLKITIKKDESK
SQSKEKDGALSPDESRRSPRMKTTPLRKSCEGRSQSRSDGTRANDDCDTSQIPVSAGMSD
SDSDEVPEVLRQVEDMEAGSDEEEAEPNSKSVDNAARKDSTDQPSEKTVKRKLIASSSDS
ESGVKSSTVKKQAAKKKKAQESDSSNHDSDLEKELKSLSKLNTTKKSSKRGKDEDASKKE
GDEAKKEGQKGPKRSFARKRRSQKGKEKVTMDSSSSEEEEEQAADSGEDSSDQQKIKPIL
ESVMPHTDAFHQSSGDEAQVKDEPTQLVDDDDDPENRIAKKMLLAQIKANYSSGDDSSSE
DEDSKKDKDEKSSTKVKTDDSSEGEGEEEEDSGSEVDVKKAGRRHRLLRKKLTLSEGESD
NDKPTKSSKEIKRRGRRKVSSDDSADSDFKRSGSGSESALSEEVSEDEEEEEDKSNKRRT
RSSKKAEKDGERSYQKEKKKKRRRIKVQDDSSSNKSAEEGEEEGGEGDEKGTPKGRKKIR
KILKDDKLRSETQNALKEEEERRKRIAEKERLREKLRETIVVEESSQITCPITTKLVLDE
DEETKEPLVQVHRNMVTKLKPHQVDGVQFIWDCCCESVKKTQKSAGSGCILAHCMGLGKT
LQVVTFLHTVLLCEKLDFSTALVVCPLNTVLNWLNEFEKWQEGLKDEESLEVTELATVKR
PQERAYALQRWHEDGGIMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVNPGPDFVICDEG
HVLKNEASAVSKAMNAIKTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFI
NPIQNGQCADSTLADVRLMKKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLAVRIMP
VQCKLYRYYLEHFTGVGSALEGGRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGY
FDEDSMDEFIASETEESSMSLTSEDEKPKRKKKRGKGKGESSDKSDSDDVEVIKEWNTSS
RGGNPEGRNRAEPVEEVRPSNSAPGSPSPDWYKEFVSESDAEVLEHSGKMVLLFEILRMA
EDVEDKVLVFSQSLISLDLIEDFLELASRAKDEGKNSPYKGEGKWFRNIDYYRLDGSTNA
LTRKKWAEEFNDTSNIRGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVY
RFGQLKTVYVYRFLAQGTMEEKIYDRQVTKQSLSFRVVDQQQIERHFTMNELTELYSFEP
DQLDDPSEKKSKRSTPMLPKDPFLAELLHSFKDQIVGYHEHDSLLDHKEEEALSEEDRKA
AWAEYEAEKKGLSMRFNQPSYPSVGIGSNYFPFNVAALASMSNQQLEELINQGRQKVLEA
TSALKSLPREPLEDIIGQLWKENPNLTETQVQGMALARQATFEMEMKHREAVYRDVLNKQ
QTLMMYVQKVIANRKVQEQQMALARQGLLMNQLALQNGIAGGMSQMELLGLYQQLGALQG
LPTSQIGKNPGPSKGL
NT seq
6171 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgaaaacggcagatcgagcaagctgactgcactggtgacaaaacttcatgaa
tccttggatcattctccagaggaaaaaactgctacatctcaagttgatgaaatctccagt
ggtaaaatggcctccagtgactcaaacctcaatgaggaaataatggaacaagtacagccc
agttgttctactgaagttccaaaggccacaccacgctcaaaaaggaagcctgcagttgta
acaaaacatacagctgtaaatgaggccgaatctgcagatgaatgtgagcaagattgtgtc
gctgataatactaatgatgccacaattgatatggaagagataccagaagatgtcgttgtg
gtgaagccagaacctgtcaacaatgaaggaaaagatgaattcaaaggcccagagttccgt
aacaaaggagggagcaaagtcaaggaagagagtcagaggcggcgtcctgatgagcacctt
gaagagattaggtcctcgagagttaattgcactgcgtgtgggcagcaagtcaatcatttc
cagagggactctgtgtatcagcatcctgtgctccaagttcttctctgtaaatcctgtttc
aagtattacatgagtgatgacatcagtaaggatgaagatggaatggacgaacagtgcagg
tggtgtgctgaaggaggaaatctcctttgttgtgactattgtagcaatgcgttttgcaaa
acatgtattctacgtaaccttggaagaaaggagctgtctggaatcatgaatgacgatcat
aagtggcattgctatgtgtgccaacctgagccacttcaagaccttgttgcagcttgtgag
aaggttctgagaaatctggaatgtatgaaaaagccaaagggagaccatgacaaaccgaga
cgtgacagtatgaagcacaaacagggcaaagttaaaaattcagctctcaatggaaaggat
gttaattttgatggatcagggacactaaccttttcttacaaaacattaaaggttccaaaa
gaactggtcaagaagacaaagaaactgattgagacaacaaatggcttgaacagcacattt
gtgcagtttatccagcaggaaccggtctaccttggtgataacgttgtccggcacaggcat
ttgaaagcgttcaggtctgttttggctgacttgaaaaaggtccatgcgtctttagaggaa
gcgctagatgaagagtttagaaacctagaggtctgcagcagagaggaaaacaggtcagcg
gttaatccgaatgtatctaacacagtccccaactctgagcatcttgaccagagtcaagat
actcgggtggttctggatggcaccacagatcaggttccagtagcgtcagaagacaacatg
gatgaggaaaacacagttccagctgatgtagaaatggcagaagaagccgtatcctcagca
gaaattccagccaatgaatttgtagaaaacgaagctactgcgaatgttgataacggtgaa
cctgactgtgaagatgatggatcagcagcaggtgaagtctctcttgacaaagacattgtg
tctatacctccatctgttcctgaggaactctttgagatggttgagagtctttcagattgt
gtaaaacaagagggtgaaaaggactctcttgattctccagacagtacatcaagtaagacc
tcactgtctgatggaaagtcaacagaatccactaagaggtctgcaaagatgagtaaaaaa
cttgttgtaaagctcacccctattcctcttaaaattaccatcaagaaagatgaaagcaag
tcccagtcgaaagaaaaagatggtgctctgtcaccagacgaaagcaggcgttcccccagg
atgaagaccacccctctacgcaagtcatgtgaagggaggagtcagagtagatccgatggt
acaagagcaaatgacgactgtgacacttcacagattccagtttcagccggtatgtcggac
tctgattcggatgaagtccccgaagtcctccggcaggtagaagacatggaggctggctca
gacgaagaggaggcagagcctaacagcaagtctgtggataacgctgcacggaaagattcc
actgaccagccctctgaaaagacagtgaagcgcaagctcattgcatcctcctcagattca
gaaagtggtgtgaagtcatcgacagtaaagaaacaagctgccaaaaaaaagaaggctcaa
gaatctgattcatccaatcatgactcagatcttgagaaggagctcaagagtttaagcaag
ctgaatactacgaagaaatcgtctaaacgaggcaaggacgaagatgcgagcaagaaggag
ggggatgaggccaagaaggaaggtcaaaaaggtccgaagagatcatttgcgcgtaaacgg
aggtcacagaaaggtaaagaaaaggtcacaatggattcgtcctccagtgaggaagaggag
gagcaggcagcagactccggggaggatagcagcgatcagcagaagataaaacctattctc
gagtctgtgatgccccacacggatgctttccatcagtcatcaggagatgaagctcaagtg
aaggacgaacccactcaactggttgatgatgacgacgaccctgagaatagaattgccaag
aagatgctgttggctcagatcaaagccaattactcatcaggggatgacagttcttcagaa
gatgaagacagcaaaaaagacaaagatgaaaaatcttcaacaaaagtgaagactgatgac
agttctgagggtgaaggagaagaggaagaggactctgggtcagaagtggatgtgaaaaag
gccggacggagacaccggttgcttcgcaagaagctgacgctaagtgagggcgagtctgac
aatgacaagccaaccaagagcagtaaagagatcaagagaagaggaagacggaaagtgagc
agtgatgactctgctgattcagacttcaaacggtctggttctgggagtgagtcagcactg
agtgaggaagtgagtgaagatgaggaggaggaggaggacaagagcaacaagcggagaaca
cgatcatccaaaaaagctgagaaagatggcgaaaggagttaccagaaagagaagaagaaa
aagcggcggcggattaaggttcaagacgattcctccagcaataagagtgctgaggaaggg
gaagaggaaggcggagaaggggatgaaaagggcacaccaaagggccgcaagaagatccgt
aagatcctgaaagatgacaagctgcgctctgagacccagaatgctttgaaagaggaagaa
gagagacgtaaacgaatagctgaaaaagagcggctgagggaaaaactacgagagacaatc
gtggtggaggaatcgtcgcagatcacctgtcccattactacaaaactggtgctggatgag
gatgaagagaccaaagagccacttgtccaagtccacagaaacatggtgaccaagctgaag
ccccaccaagtggatggtgtgcagtttatttgggattgctgttgtgagtctgtgaaaaag
actcagaagtcagctggctctggctgtatccttgcacactgcatgggtctgggcaaaacc
cttcaggtggtgacgtttctccacactgtgcttctgtgtgagaaacttgacttttcaaca
gctttggtggtgtgtccccttaacaccgtcctcaactggctaaatgagtttgagaagtgg
caagagggcttgaaagacgaggaaagcttagaggtgactgagttggccacagtgaaaagg
cctcaagagcgagcatacgccctgcagcgctggcatgaagatggtggcatcatgatcatc
ggttacgaaatgtaccgcaacctaacacaaggccggaacatcaagagcaaaaagcttaaa
gagacattccaaaagaccctcgtcaacccaggtccagactttgttatttgtgatgagggc
catgtgttgaagaatgaagcctcagccgtgtccaaagccatgaatgccattaagacccgg
cgaagagtggtactgactggaactccgcttcagaacaacctgattgagtaccactgcatg
gtgaactttatcaaagaaaacttgctgggctctgtgaaagagtttaggaaccgtttcatc
aaccccatccaaaatggccagtgcgctgactccacgctggctgatgtgcgtctcatgaag
aaacgagcacacattctctatgaaatgctggcaggatgtgtccaaagaagagactacact
gcacttaccaagttcttgccacctaaacatgagtatgtgctcgcagtgcggattatgcca
gtgcagtgcaagctgtacagatactatctggaacactttacaggtgtcggttctgccttg
gaggggggaagaggacgtgcaggcacaaagcttttccaggatttccagatgctcagcaga
atctggacacatccttggtgtctccagctggactatatcagtaaagaaaacaaggggtat
tttgatgaagacagcatggatgaattcattgcgtctgaaacagaggagtcctcaatgagt
ctgacttctgaagacgagaaacccaaaaggaagaagaaacgggggaaaggcaaaggtgag
agctcggacaagtccgacagtgacgatgtggaggtgattaaggaatggaacacgagctcc
cgtggaggaaacccagaggggaggaatagagctgagcctgtagaagaagttcgtcccagc
aactcggctcctggcagcccgtctcctgactggtacaaggagtttgtgagcgaatcggat
gctgaggttctggaacactccggaaaaatggtgcttttgtttgaaattctgcgaatggca
gaagatgtggaagataaagttttggtgttcagtcagtcactcatttcactggacctcatt
gaggatttcctggagttagctagcagagccaaagatgaggggaaaaactctccttacaaa
ggtgagggcaagtggttcaggaacattgactactaccgattagatggttcgactaatgcc
ttgacgaggaagaaatgggctgaggaattcaatgacaccagcaacattcggggtcgtctt
tttctcatctctacaagagctggctctctagggatcaacctagtggcagcaaaccgggtc
attatctttgatgcctcatggaatccatcttatgacattcagagcattttcagggtttac
cgcttcggccaactgaaaacggtgtacgtctacaggtttttggcacagggaaccatggag
gagaagatttatgataggcaggtgaccaaacagtccctgtcgttccgtgtggtggaccaa
caacagattgagcgccacttcaccatgaacgaactgactgaactctatagttttgagcca
gaccagctggatgacccatcggaaaagaaaagcaagcggtccacacccatgttacccaag
gaccctttcctggccgagctacttcacagcttcaaagatcagattgtaggttaccatgag
catgattccctactggatcacaaagaggaggaggctttgagtgaggaggaccgtaaggct
gcctgggccgagtatgaggcagagaaaaagggtctctccatgcgtttcaaccagccgtca
tatccttctgtaggcattggctcaaactacttccccttcaacgtggcagctctggcctcc
atgtccaaccagcagctggaggaactgatcaaccagggtcgacagaaggtgctggaggcc
accagcgctctgaagtctttgcccagggagcctcttgaggatattattgggcagttgtgg
aaggagaatcccaatctgaccgagacgcaggtgcagggcatggctctggccagacaggca
acctttgagatggagatgaaacaccgagaagccgtgtaccgagacgttctcaataagcaa
cagacgctgatgatgtacgtgcagaaggtgattgccaatcgcaaagttcaggagcagcag
atggcacttgctaggcagggactgctgatgaaccagctggcccttcagaatggcattgct
gggggaatgagtcagatggaactgctgggtctgtaccaacagctgggtgctctccagggt
ctgccaacctcccagatcggcaagaacccggggccctccaagggcctgtag
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integrated database retrieval system
