Neoarius graeffei (lesser salmon catfish): 132890554
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Entry
132890554 CDS
T10798
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132890554 (rlim)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132890554 (rlim)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132890554 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_4
zf-RING_16
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
132890554
NCBI-ProteinID:
XP_060783503
LinkDB
All DBs
Position
8:28320462..28334375
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AA seq
634 aa
AA seq
DB search
MEGSDNADQGSSEQADSQRRQQQDRLNREEAFYQFVNNLSEEDYRLMRDNNLFGTPGEIT
EEELLNRLHQIRDGPEQPHSSSSNNPEVSMGEPRVSEAEGTEEASNGDTLLDWLNTVRQT
GNTTRSGHRGNQSWRAVSRTNPSSGDFRFSLEININRNIAEQQTQTEADRVESDQSRADG
SISEPETPIEAAEVVEEPVVEEMAVIVEPELPAPNSPAVTQPTSPQNQLPTSPSLPQVER
PSRGQIRARSPSPEQRRTRARTARSHLALSLDQLDGLPQAHHGLSSRSPELVPEMQVDGS
SRTRLHVLSRQNIQLESEETIATTEPQPAPQHHQEIEMPSGEAGASARRPPTIMLDLQVR
RVRPGEYRERDSIANRTRSRSQTSNNTFLYETERGGFRRTFSRSERAGVRTYVSTIRIPI
RRISDAGLGEATSMALQSMIRQIMTGFGELSYFMDSDSDSTDSSRGSNHAADVADTLGSP
DAGSPSTVTEPSLGAGGSNQSGSEAPTEEREDSGAAPRESRARQRAPINLEDSGSLPFLR
LAHFFLLNDDDDDQPRGLTKEQIDNLSMRNFGESDAFKTCSVCITEYAEGNKLRKLPCSH
EYHVHCIDRWLSENSTCPICRRAVLVSANRESIV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggagggctcagacaatgcagatcaaggcagtagtgaacaggccgattcacagcgcagg
caacagcaggaccgcctgaacagagaggaggccttctaccagtttgttaacaatctgagt
gaggaggactataggctgatgagagacaataatctttttggcacaccaggtgaaattact
gaggaagagttgttgaaccgtcttcatcaaattagggatggcccagagcagccccacagt
agcagcagcaacaatcctgaagtcagtatgggggagcccagagtttcagaggcagagggt
acagaagaagcatccaatggtgacactcttcttgactggctcaacactgtgcgtcaaact
ggtaataccacaagaagcgggcaccggggcaaccagtcatggcgggcagttagccgaact
aatccaagtagtggagacttccgtttcagtttggagatcaacatcaatcgcaacatagct
gagcagcaaacacagactgaggccgatcgggtagagtcagatcaaagccgtgctgatggc
tctatatctgaacctgagacacccattgaggcggcagaggtggttgaagagccagtggtg
gaggagatggcggttatagttgaaccagaacttcctgcgcctaatagcccagctgtaacc
cagccgacaagcccacaaaatcagctgccaacttctccaagtctgcctcaagtagaacgc
ccaagtagaggccagattagagctcgtagcccgagcccagaacagcgcagaaccagggca
cgaacagccaggagtcatttagcgcttagcctggaccagttagatgggcttccgcaggct
caccatggactatcctctcgaagtcctgaacttgtcccagaaatgcaggtagatggcagc
tccaggacacgactacatgttctctctcgacagaatatacagttagaaagtgaggaaact
atagcaactacagagccccaaccagcacctcagcaccaccaggaaattgaaatgccttca
ggagaagcaggtgcttcagcccgacgtcctccaacaataatgctggacttgcaggttcgt
agggtgcgaccaggcgagtaccgcgagagagacagcattgccaaccgtacccgctctcga
tcacagacctctaacaacactttcttgtatgaaaccgaacgtggaggctttcgcaggacc
ttttcacgttcagagcgggcaggtgtgaggacatacgtcagtactatccgtattcccatc
aggagaatctcggatgccgggcttggcgaggccacctccatggccctgcagtccatgatc
cggcagatcatgactggctttggtgaactcagctacttcatggactctgactctgactcc
acggattcaagccgtggctccaaccatgcggcagatgttgctgacacactgggaagtcca
gatgctggaagtccctctactgtgactgagccatcacttggggcaggagggtcaaatcag
agtggctcagaagcaccgactgaagagagggaggacagtggtgcagctccaagagaaagc
agggcaaggcaacgagctcctatcaacctagaagattctggctctttgccctttctgcga
cttgcacatttcttcttgctcaatgatgatgatgatgatcagcccaggggcctcacaaaa
gagcaaatcgataacctttccatgcgcaattttggtgagagtgatgcattcaagacctgt
agtgtctgcattacagaatatgctgaaggcaacaagcttcgtaaacttccctgctcacat
gagtaccacgtgcattgtattgaccgttggctttcagagaattcaacatgccccatctgt
cgcagggcagtccttgtttctgccaacagagagagcattgtttag
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