Neoarius graeffei (lesser salmon catfish): 132890573
Help
Entry
132890573 CDS
T10798
Symbol
ebf1a
Name
(RefSeq) transcription factor COE1-A isoform X1
KO
K09103
early B-cell factor
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132890573 (ebf1a)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
132890573 (ebf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
132890573
NCBI-ProteinID:
XP_060783551
LinkDB
All DBs
Position
8:complement(30128475..30353002)
Genome browser
AA seq
603 aa
AA seq
DB search
MFGIQESIQRSGSSMKEEPIGGMNAVRSWMQGAGLLDATTAAQSGVGLARAHFEKQPPSN
LRKSNFFHFVLALYDRQGQPVEIERTSFVGFVEKEKEPTGEKTNNGIHYKLQLLYSNGIR
TEQDFYVRLIDSMTKQPIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPV
IIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHG
RRARRLDPSEGTPSYLEHATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLVW
SELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQK
VIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYNVPRTHNQL
SGLANSSVHTGMMGVNSFHGQLAVNVSESTQGANQGFSRNTSSVSPHGYVPSTTPQQGSY
STVSTSMNGYGNSSMTTLGGSPNFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSGIF
SFSPANMVSAVKQKSAFAPVVRPQASPPPTCTSANGNGLQVDQSFVDSSKYSTASSLQGL
AFS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggagagcatccagaggagcgggagtagtatgaaggaagagccgatc
ggcgggatgaacgcggtgcgctcgtggatgcagggagccggcctgctggacgccaccacc
gccgcgcagagtggtgtaggtctggcccgagctcactttgagaagcagcctccctcaaat
ctgcgcaaatccaacttcttccactttgtgttggctctgtatgacagacaggggcagccc
gtggagattgagcgcacgtctttcgttggatttgtggaaaaagaaaaggaaccgaccggt
gaaaaaacaaacaatgggattcattacaaattgcaacttctctacagtaacgggataagg
acagaacaagacttctatgtacgattgattgactccatgacaaaacagcctattatctat
gaaggtcaagacaagaatccggagatgtgccgagtgctgttgacacatgagatcatgtgc
agccgctgctgtgacaagaagagttgcggcaaccgtaacgagacaccctctgatcctgtc
atcatagacagatttttcctaaagtttttcctgaagtgtaaccagaactgtctaaagaat
gcagggaacccaagagacatgcgacgcttccaggtggtagtctctacgacagtcagcgtg
gatggtcatgttctggctgtgtctgataacatgtttgtgcacaacaactctaaacatggg
cgcagggctcgccgactggacccctcagagggcacgccctcatacttggaacatgccaca
ccctgcattaaagccatcagtcccagtgagggctggactacaggaggggctactgttatc
atcatcggggacaatttctttgatgggttgcaggtcatatttggcaccatgctggtctgg
agtgagcttatcacacctcatgccattcgggtacagactccccccaggcacattcccggg
gtggtggaagtcactctgtcctacaagtccaaacagttctgtaaggggacaccaggcaga
ttcatttacacagcactgaatgagcccaccattgactatggcttccagcggttgcagaag
gtcatccccagacatccaggtgatcctgaacgcttgccaaaggaagtgattctgaaaaga
gcagcagatcttgtcgaagccttgtatgggatgcctcacaataatcaggagatcattctg
aaaagggcagctgacatcgctgaggcactctacaatgtaccacgcacccacaaccagctc
tctggtctggcaaacagctctgtgcacactggcatgatgggcgtcaactctttccatggc
cagcttgctgtcaacgtctctgaatccacacagggagccaatcagggtttcagtcggaac
acaagtagtgtgtctcctcacggctatgtgcccagcactacaccccagcaaggcagctac
agtaccgtgagcacgagtatgaatggatatggtaacagcagcatgaccacgctaggagga
tcccccaacttcctaaatggctcagctgccaattctccctatgccatcgtgccctctagt
cccaccatggcatcctccaccagcctgccctccaactgcagcagctcctcaggcatattc
tccttctcaccggccaacatggtgtctgcggttaaacagaagagcgcctttgccccagtg
gtgcgtccccaagcctcaccacctcccacctgcaccagtgccaatggcaacggtctccaa
gtagatcagtcttttgtggactctagcaagtattccacagccagctccctgcagggactg
gccttctcctga
DBGET
integrated database retrieval system
