Neoarius graeffei (lesser salmon catfish): 132890629
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Entry
132890629 CDS
T10798
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
Membrane trafficking [BR:
ngra04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
132890629 (sh3tc2)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132890629
NCBI-ProteinID:
XP_060783651
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Position
8:complement(44996246..45026410)
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AA seq
1454 aa
AA seq
DB search
MACCCCCPASCLRNCFLLSDISTLDLNTLWEEPPYALTRANDLFPGNDVMATGDEEVETE
AEVESEGITGESYWKRKEALSTVSLAVGDHFSSDVILLFSGRRRSNLEPDSVLQEALRTR
LRVVESNSQDVIQLFKELSARLVSVHAEKDHFVITFKTVEEIWKFSTYLALGYVARCLEN
FLCDQAFWLDPLLLSDVEICVTVDEEHLATLYLGLLLQEGSFFAKALVNSEQCIEEEDEL
VYKKNDLVMVKDIGQQSTWEGTLLSTGQHGLVPVHAMQPLPYPFYQWFLRKYDGNAGGFS
FTKGQSDQPIVTGTCIAVVDHYPMVKDELHFSQGDLIEVEGLLISSLNTFIGKHLSSGQR
GFVHMAHVRPENVKPLRGQLVFLSEEERVALLQFNPCIEQCHTGLLDKLFSTDISTVYRL
DRLDDSDFTYIRNQPKQEQKPPVDARKSIILEHSDTPPYHPSPRPSFYASQSCLDKDNEA
FSFNLEDTFREMDEYEEDPPFMDEGIWDTEEAEFVDPILTLLNLDHFQESFHALYDLSYS
FLDTVFGGLPVEEVLLHLESLREGAKKGRMVWAHRRTCFLLGRLCAKKLKYSQARVYFEE
ALVVPVEGFNDKPLLIALYTNLTAVYLKQKMTDKLPYTLEKASALILCLPLHNFCSLDEF
ELLKPILRRAIVDNDKHLEARTCYLILCLFLQNKKIEEALPFVERLQFLSLTLSAEEGMP
IGPVDLNWILCRLYHKKYLPYLALASLSLDSAQDHSLDNAFQKIELFLKNSVRLNPCWKD
GSALLPVQVVVYLQQALSIASCGEHLKIQRDLCLSLASVYQQYGTLERAVLCAQQAVQAG
SHINEEEGFEASVLLAWLFVLTEKPDRAQSTLQPLLNSLNKTDSPTQCGVVHNLLALCLH
KQGKVTEAAREFHCALKISQENGNKHNEALALANLGCLALSVGAPGLAERFLLRSLHLFQ
FLSESPSDEEHVQTLLWLGRSYKDRGESQKVRLCYEMGLLVAISAKNLHSQMVVAKVLSH
LYADLMLYGQCIIYYEHCVGLSRELKDKRLEGEYLDILSNLYLSLNTEKSSRKSLDYTKQ
SLRISIDLGKKQEESQTWLQVGRIYYLIHEDELADMYLQAAVKTALRINDLCFAMNIYED
AGDVFFKGHRNRLAAVSFFRDGGLPFARCLKDVHSEFRLLCKLSELLLKEGQHKEALQYA
TLAMQISTSTGVCLNERVSYHRLASIYFTLEQYEMAENYYLKALSLCPTALEHKEEARYY
VKVYCRLADLTLHKIKDAFDAMGYFHLALAAALEDGGSLQARYIIYMKLAEIHANYLPDV
RLSQRYMDSAWSLKRELAGHTDSSDTDDEYMNHVATEYAEAKSISHSCDGSRSSDLNDTP
VSANMMDTSHTITVQKEAETEAVPADYMCREDMDTCSIEGTNCGPGQHTNSEISQINQRL
HSSHTDSSLLSTEF
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggcatgctgctgctgctgtccagcttcgtgtctgagaaactgcttcttgctttcagat
atatcaactcttgatctcaatacgttatgggaagagcccccatatgcactaacaagagcc
aatgatctctttccaggaaatgatgtcatggccactggggatgaggaagtggaaacagag
gctgaggtggagagtgaggggatcactggtgagagttactggaagaggaaggaagctctc
agcactgtctctttggctgtaggagatcacttctcttcagatgtgatattgctgttcagt
ggcagaaggcgctccaatttggagccagacagcgtgctgcaggaggcactgcgcactaga
ctaagggtcgtagagagcaacagccaagatgttattcagctttttaaagagctctctgca
cgtttggtttcagtgcatgctgaaaaagaccattttgttataacctttaagacagtggag
gaaatctggaagttctctacgtacctagctctaggatatgtagcaaggtgcttggagaac
tttctctgtgaccaggctttctggctggaccctcttttgctcagtgatgtggaaatttgt
gtgacagtagatgaggaacacctagccaccctctatctggggctcctacttcaagaaggt
tcattcttcgctaaagctctggttaacagtgagcagtgtatagaagaagaagatgaattg
gtttacaagaagaatgaccttgttatggtgaaggatattggacagcagtccacgtgggag
ggaacactgctgtctactggtcagcatggtctagtgcctgttcatgcaatgcagcctcta
ccctaccctttttaccagtggtttcttagaaaatacgatggcaatgcaggagggttttca
ttcacaaaaggacaaagtgaccaacctatagtaacaggaacttgcatagcagtagtggac
cactacccaatggttaaggatgaactgcacttcagccaaggagatctcatagaggtcgaa
ggcttgcttattagctcactgaatacgttcattgggaaacacctctctagtggacagaga
ggatttgtccacatggcccatgtgagacctgaaaatgtcaaaccactcaggggacaattg
gtctttctgagtgaggaggagagagtggctctcttgcagtttaacccatgcattgaacag
tgccacactggtctattggacaaactcttctccactgacatcagcactgtttacagatta
gatagactggatgactcagattttacctatatcagaaaccaaccaaagcaagaacagaaa
cccccagtagatgccaggaagagcattatactggaacatagtgataccccaccctatcac
ccctctcctcgaccttcattctacgcttctcagagttgtctagacaaagataatgaagcc
ttctccttcaacctggaggacactttccgagagatggatgagtatgaggaagatcccccc
tttatggatgaaggcatctgggataccgaagaagctgagtttgttgacccaattttaacc
ctcctcaatctggaccacttccaggaatcttttcatgcactttatgacctctcctactcc
ttcttggacacagtctttggtgggcttccggtggaagaggttctcctgcatctggagagc
ttgcgggaaggagcaaagaaaggcaggatggtgtgggcccatcggcggacctgcttcctt
ttgggcaggttgtgtgccaaaaagctcaaatactctcaggctcgagtctactttgaggag
gcactggttgtccctgtagagggttttaatgacaagcctctgttgattgccctgtatacc
aaccttacagctgtgtacctgaagcagaagatgacagacaagctgccttatacattggag
aaagcaagtgctcttatactgtgcctcccattgcataacttctgctctcttgatgagttt
gaactgctcaagccaattctacgcagagctattgttgacaatgataagcaccttgaggca
cggacttgctatctaattctctgtctatttttgcagaacaaaaagattgaggaggctttg
ccttttgtggaaagacttcagttcctcagtctcactctctcagcagaagaaggaatgcct
atagggccagttgacctgaactggatactatgcaggctctaccacaagaagtatctgcca
taccttgcattagcatctctcagtctagattcagctcaggatcattctttggataatgcc
tttcaaaagattgagctattcctgaagaattcagtcagactgaatccttgttggaaggat
ggctctgctctgctcccagtccaggtggtagtttacctccagcaggcattgtctatagcc
agctgtggagaacacctgaagatccagagagacctttgtctgagtttggctagtgtctac
cagcagtatggaactttggaaagggcagttctctgtgcccaacaagcagtgcaggcaggg
agtcacattaatgaggaagagggctttgaggcatcagtgctgctggcctggctctttgtg
ctcacagagaaaccagatagagcccaatctactttgcagcctctccttaactcgctgaat
aaaacagacagtccaacacagtgtggagttgtccacaacctacttgcgctatgtcttcac
aaacaggggaaggtcacagaagcagcaagggaatttcactgtgctctaaagatttcacag
gaaaatgggaacaagcataatgaagctctggctctggctaatctggggtgccttgcctta
tcagtaggagctccaggcctagcagagaggttcttgctcaggtctctgcacctttttcag
tttctctctgaaagcccctcagatgaagagcatgttcagactctgctgtggctaggcaga
agctacaaagataggggagaaagtcaaaaggttaggctgtgctatgagatgggtcttctc
gttgccatcagtgccaagaacctgcacagtcagatggttgtagcaaaggtgctcagtcat
ctatatgctgacttaatgctttatgggcaatgtataatttactatgagcactgtgtcggg
ctttccagagaactgaaggataaacgtctggagggagagtacctggacattctcagcaat
ctctatctatcacttaacactgagaagtcctcacggaagtctctggactacaccaagcaa
agtctcagaatttcaatagacttaggaaagaaacaggaggagtcacagacatggctacag
gttggccgtatctactacttgatccatgaggatgaattggcagatatgtatcttcaggca
gctgtaaagacagccctaaggataaatgacctatgttttgctatgaacatttatgaagat
gctggagatgtcttcttcaaaggacacagaaatcgactggctgctgtttcattttttaga
gatgggggtttgccatttgcaaggtgtctgaaggatgtgcattcagagtttaggctttta
tgtaagctctctgaattgctgctgaaggaaggtcagcacaaggaggccctgcagtatgct
acactggcaatgcaaatcagcacctcaactggtgtgtgcctgaatgagagggtgtcctac
catcgcctggcctcaatctacttcactcttgagcagtatgagatggctgagaattactat
ttgaaggctctgtccctctgtcccactgcactggagcataaagaagaggcccgctactat
gttaaagtttactgcagactagctgatctaactctgcataagataaaggatgcttttgat
gccatggggtattttcacttagccctagcagcagctctggaagatggagggagccttcag
gccaggtacataatttacatgaagctggcagagatccatgctaattacttacctgatgtg
aggctgagccagagatatatggacagcgcatggagcctaaagagggagctggcaggacac
acagactccagtgacacagatgacgaatatatgaaccatgttgcaacagagtatgctgag
gcaaagtcaatcagtcattcctgtgatgggtcaaggagctcagacttgaacgatacccct
gtaagcgccaatatgatggacactagccatacaataactgttcagaaggaggctgaaaca
gaggctgttcctgctgattacatgtgcagagaggatatggacacctgcagcatagaaggg
actaactgtgggcctggacagcatacaaattctgaaataagtcagattaatcaaagactc
cacagcagccacacagattctagcttactatctacagaattttga
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