Neoarius graeffei (lesser salmon catfish): 132890635
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Entry
132890635 CDS
T10798
Symbol
gria1a
Name
(RefSeq) glutamate receptor 1a isoform X1
KO
K05197
glutamate receptor 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04080
Neuroactive ligand-receptor interaction
ngra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132890635 (gria1a)
04082 Neuroactive ligand signaling
132890635 (gria1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngra04040
]
132890635 (gria1a)
Ion channels [BR:
ngra04040
]
Ligand-gated channels
Glutamate (ionotropic)
132890635 (gria1a)
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
132890635
NCBI-ProteinID:
XP_060783669
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Position
8:46099870..46441906
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AA seq
911 aa
AA seq
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MQRSIALLCTSVIGLCFGSSFPSNINIGGLFPTESHEYEVFRFALSQHQDIPKLVPQVDM
VKMGSSFSMTYAFCSQFAKGVYAIIGVYDRKTVSMLMSFCGALHVCFVTPSFPIETSNQF
VIQLRPELQDALVGVIEHYKWTKFVYMYSSDSGLIVLQKVLDTAAERNWLVTSVNVETMT
EASFLKVFQDLDKRKEGQIIIDCELERLSSILKKIIQLGKNLKSYHYILANMGFMDIDLS
EFKKGEANLTGFQLVDYVDPGVSRVAQQWMDFDKKDSKVPKKGLKYTGALTYDGVKVMST
AFQNLRRQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRIEGVTGHIQFNEKGRRI
NYTISVMELKATGPKKVGYWNEDEKFVSTAAYMSGTNETYGFHNRTYIVTTILESPYVML
KKNHEKLVGNDKYEGYCVELAAEIAKHVGYQYKLKIVADGKYGAKDPETKMWNGMVGELV
YGKASVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMC
IVFAYIGVSVVLFLVSRFSPYEWHAEDCEESGEANVNQAESISGQNAQNQVQQNQDQTNE
FGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMV
SPIESAEDLAKQTEIAYGTLDAGSTKEFFRRSKIAVFEKMWSYMKSADPSVFVKTTDEGV
IRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSPLRNRVNLAV
LKLNEQGLLDKLKNKWWYDKGECGSGGSDAKDKTSALSLSNVAGVFYILIGGLGLAMLVA
LVEFCYKSRTESCRMKQSINDAMHCTTLTRMSGSGSGGENGRIIAHDFPKAVQTLPCMSH
TAAMGLGASGM
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgaagcatcgctctgctctgcaccagcgttatcggactctgctttggttcgagt
tttccaagtaatatcaacataggaggattattccctaccgagtcgcacgaatatgaagtg
ttccgatttgcgctttcgcagcatcaggacattcccaaactggtacctcaagtagatatg
gtaaagatgggtagcagcttctccatgacttatgcattttgttcacagtttgcaaaagga
gtgtatgccatcattggtgtgtacgacaggaagacggtgagcatgctgatgtcattttgt
ggtgcactgcacgtctgttttgtgacacctagcttccccattgagacctccaaccaattt
gtgattcaactgcggcccgagttgcaggacgctttggttggggtcattgaacactacaag
tggaccaagtttgtctacatgtatagctccgactcaggactaatcgtactgcagaaagtt
ctggacacagcagcagagcggaactggctggtgacctcagtgaatgtggagaccatgact
gaggcatccttcctcaaagtctttcaggacctagataaaaggaaggaaggccagatcata
attgattgtgaactggaacgactcagctccatcctgaagaagattatacaactgggaaaa
aaccttaagagctatcactacatcctggcaaacatgggctttatggacattgacctgagt
gaatttaagaaaggtgaagctaatttgacaggctttcagcttgtggactatgtggatcca
ggtgttagcagagtagctcagcagtggatggactttgacaaaaaagactccaaagttcca
aagaaaggactcaagtacactggcgcgctcacttatgatggtgttaaagtgatgtctaca
gcttttcagaatctccgcaggcagaggattgacatatcacggcgtggtaatgctggtgaa
tgccttgcaaacccaccagccccctggggccagggcattgacattcagagagctttgcag
caggttcggattgaaggtgtaacaggacacatccagtttaatgagaaaggccggcgaatc
aactacaccatcagtgtgatggagctgaaggccacagggccaaagaaagtaggatactgg
aatgaggatgagaaatttgtgagcacagcagcctacatgtctggaactaatgaaacctat
ggatttcacaatcgcacatacatcgtcaccaccatcttggagtcgccatatgtgatgttg
aagaagaatcatgaaaagcttgtaggaaatgataagtatgaaggctactgtgtggagctg
gcagcagaaatagccaagcatgtgggataccagtacaaactcaaaattgttgctgatggg
aaatatggagctaaggatccggagacaaagatgtggaatgggatggttggagaactagtt
tatggaaaagccagtgttgcagtagcaccactgaccatcacattggtgagagaagaagtt
attgacttctccaagcccttcatgagcctgggcatttcaattatgatcaagaagcccacc
aagtccaaaccaggagtcttctcttttcttgacccactggcctatgagatttggatgtgt
attgtgtttgcctacattggcgtgagtgtggtgctctttctggtcagccgcttcagccca
tatgagtggcatgctgaggattgtgaggaaagtggagaggccaatgtcaaccaggctgaa
tctatttcaggccaaaatgcacagaatcaggtccaacagaaccaggatcagaccaatgaa
tttggcatcttcaacagcctctggttctcactcggtgctttcatgcagcaaggatgtgac
atctcacccagatctctctcaggccggatcgtgggtggtgtctggtggttcttcaccctc
atcatcatttcatcctacacagctaacctggcagccttcctcactgtggagaggatggtc
tctcctatcgagagtgctgaagacttagccaagcagactgagatcgcttatggtacactc
gatgctggctcaaccaaagagttctttaggcggtcgaagatcgcggtgtttgaaaagatg
tggtcctatatgaagtcagccgatccatctgtgtttgtgaagaccactgatgaaggagtg
attagagttaggaagtctaaaggaaagtatgcctatctgctggagtccaccatgaatgaa
tatattgaacaacgcaaaccctgtgataccatgaaagtgggcgggaatttggactctaag
ggttatggtgttgcgacaccaaaaggatcgccactcagaaatcgagtcaacctggcagtg
ttgaaactgaatgagcagggcctgttggacaaattgaaaaacaaatggtggtacgacaag
ggcgagtgcggcagtgggggaagtgatgcaaaggataagacaagtgcattgagtctcagc
aatgtggctggagttttttacattctaatcggaggcctgggcctggccatgctggtggca
ctggtggaattctgctacaagtcaaggactgagtcttgcaggatgaagcaatccatcaat
gatgccatgcactgcaccacactgacccggatgagtggcagcggcagcggtggggagaac
ggccgcatcattgcccatgacttcccaaaagctgtgcagacattaccatgcatgagccac
acggccgctatgggccttggagcctcaggcatgtga
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