Neoarius graeffei (lesser salmon catfish): 132890721
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Entry
132890721 CDS
T10798
Symbol
pdlim3b
Name
(RefSeq) PDZ and LIM domain protein 3b isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132890721 (pdlim3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ngra04990
]
132890721 (pdlim3b)
Domain-containing proteins not elsewhere classified [BR:
ngra04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
132890721 (pdlim3b)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
132890721
NCBI-ProteinID:
XP_060783854
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All DBs
Position
8:54149694..54175397
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AA seq
339 aa
AA seq
DB search
MPQNVLLEGPAPWGFRLCGGKDFNQPLIITRVTPGSKASLVNLCPGDVILAIDGVPAEGM
THTDAQNKIKESTNQLCLKIERPETKLWSPQVIEEGKAHPFKVNLEAEQQDLGYFEHQFN
VRPKPFTPGGQSRDNTSQRVMPNVVQGTAPVTNRGQIEALARSTQYNSPINMYSDASLSE
ALQHTQLSAVADKPATSGKTLTSIEDSDVYRMLQEDHETPYQPRQSGSFKALQEYIESDG
TKPMVTRSVKAPVTKPQAAAASLQKLPLCDKCGNGIVGTVVKARDKFRHPACFVCSDCGM
NLKQKGYFFVEGQLYCETHARIRMRPPEGHDLVTVYPNA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaaacgtgttgctggaagggcctgccccgtggggatttcgactgtgtggtggc
aaagatttcaaccaacctctaatcatcaccagggtgactcctggcagtaaggcctcgctg
gttaacctgtgcccaggagatgtcatcctagctattgacggagtcccagcagaagggatg
actcacactgatgcccagaacaagataaaagaatctactaatcagctgtgcctcaaaata
gagaggccggaaaccaaactctggtcaccacaagtcatagaggagggcaaagcacaccca
ttcaaagtcaacctggaagcagagcaacaagaccttggctatttcgaacaccagtttaat
gtcaggccaaagcccttcacacctgggggtcaaagcagagataacacatctcagagggtg
atgccgaatgtagttcaggggactgcaccagttactaatcgcggtcagattgaagccctg
gctcgttccactcagtataattcccccattaacatgtactcagatgccagtctatcagaa
gctctacagcacactcagttatctgctgtagctgataaaccagcaacaagtggaaaaacc
ctgacatccattgaggactcggatgtgtaccgaatgttgcaggaagatcatgaaactcct
tatcagcctcgccaatctggctccttcaaggccttgcaggaatacatagagagtgacggt
acaaagccgatggtaaccagaagtgtcaaagctccagtgacgaagcctcaagcagccgca
gcctccctacagaaactgcctctgtgtgacaaatgtggcaatggcattgtgggtactgta
gtcaaagcccgggacaagttccgccaccctgcgtgctttgtgtgctctgactgtggcatg
aacctgaagcagaaaggatacttctttgtggagggacagctgtattgtgagactcacgct
cgaatccgaatgagacctccagagggacacgacttggtcaccgtgtaccctaacgcttaa
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