Neoarius graeffei (lesser salmon catfish): 132890802
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Entry
132890802 CDS
T10798
Symbol
slit3
Name
(RefSeq) slit homolog 3 protein
KO
K06850
slit 3
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ngra00536
]
132890802 (slit3)
Glycosaminoglycan binding proteins [BR:
ngra00536
]
Heparan sulfate / Heparin
Axon guidance molecules
132890802 (slit3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
LRR_9
hEGF
LRRNT
Laminin_G_1
EGF_TEN
LRRCT
LRR_14
LRR_NXF1-5
EGF_3
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
132890802
NCBI-ProteinID:
XP_060784031
LinkDB
All DBs
Position
8:66618594..66986744
Genome browser
AA seq
1527 aa
AA seq
DB search
MAPAARVKPSALQRGSLLALLCGLLCLVSARACPHKCSCSSSHVDCQAQSFKSVPRGIPR
NTERLDLDKNNITRITKVDFSGLKNLRVLHLENNQISVIERGAFQDLKQLERLRLNRNRL
QVLPELLFQSTPKLGRLDLSENQIQAVPRKAFRGITNVKNLQLDSNHISCIEDGAFRALR
DLEILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLRQRRGLAPFTQ
CMSPTHMRGLNVPDVQKREFICTGPTQSEPRSCAPQASVCPASCTCNTNFVDCRRKGLTE
IPANLPEGIVEIRLEQNLIKSIPPGAFSPYKKLKRIDLSKNQISDIADDAFSGLRSLTSL
VLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQSLNLLSLYDNKLQTISK
GLFTPLRSIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPRRLANKRISQIKG
KKFRCTGSEDYRSRLTGECFQDLVCPERCRCEGTVVDCSNLKLTSIPPHLPEHTTDLRLN
DNEISSLDTMGAFKKLPNLRKINLSNNKLREIREGVFDGAGSILELLLTGNKLQAVHGRM
FRGLSGLKTLMLRSNQITCVDNTTFTGLSSVRLLSLYDNRISTIVPGAFSTLHSLSTINL
LSNPYVCDCHLAWLGQWLKKTRVVSGNPRCQKPAFLKEIPIQDVATPDFTCDGIDENICL
PSVPRCPDPCTCSDTVVRCSNRGLRSLPKGIPKDTTELYLEGNLLTSVPKELSYLKQLLL
VDLSNNSISSLTPFIFSNMTQLSTLILSYNQIRCVPVHAFDGLRSLRLLTLHGNDLSTIP
EGAFNHLTSLSHLALGANPLYCDCELRWLSQWVKAGFKEPGIARCTGPPDMADRLLLTTP
LNRFQCNGPVDLNMMSKCAPCLANPCQNNGTCVSDVTGSYHCTCPFGYKGRNCEILTNAC
LSQPCINGGTCHLSPGQDGHYSCVCMPGFEGQRCEVNPDDCEDNDCENNSTCVDGINNYT
CVCPSNYRGDLCEEVVDPCLPGFDPCQHDSKCVPLSKGYRCECLPGYVGQHCEQDYNDCL
ENKCQHGAECVDAINGYTCVCKDGFNGLFCENPPPMILLQKTSPCEQSDCQNRAQCLLIE
GEPVCRCLPGFFGNKCQKMLTAHFLGKDTYIELPGSTIRPSTHISLQVATDKDNGMLFYK
EDHDPLAVELYQGHIRLMYDIAKYPPTTVYSVESVNDGLFHTVELLIQNQTLSLVVDKGA
PKSLGKLARPPSVEPNTHLYIGGVPSGISAIGLRAGAERTSQSFNGCIHNVRINGELQEL
STGLTGTEGILPGCHSCTVCAQGPCRQRGEVGVTCECPTSSSGPLCEQQGYANPCQSSRC
VHGLCVPKGSSYSCKCAQGYVGQYCDRREEPAACRGQYCVHGECRVDESGNPACHCQPGY
TGSTCDTELTCQGEMVRELLKRHIGQKTCTSTSKVPRVDCPRSCQPGLCCAPTKSRRRKV
SFKCSDGSSFSEEIETILECSCSKCPS
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggctgcgcgcgtgaagccctcggcgctccagcgcggctccttattggcgctg
ctgtgcggcttgctgtgcctggtctctgcgcgcgcgtgtccgcacaagtgcagctgttcg
agctcacacgtggactgccaggcgcagagcttcaagagtgtaccgaggggcatcccgaga
aacaccgagcgtctagacctggacaagaacaacatcactcggatcaccaaggtggacttt
tctggactcaaaaacctcagagttctgcatttggaaaacaatcagatcagtgtgattgaa
agaggagcgttccaggacctcaaacagctggagaggctgcgtctgaaccggaaccggctg
caggttctgccagagctgctattccagtctacacccaagctgggtcgcctggacctgagt
gagaatcagattcaagccgtacctcgtaaggctttccgtggaatcaccaacgtcaagaac
ctgcaactggacagcaaccacatcagctgcattgaagatggagccttccgagccctgcgc
gatctggagatactcactctcaacaacaacaacatcaccctcattccgctgtccagcttc
aaccacatgcccaagctgcggactctccgtctgcactccaacaacctgcactgtgactgc
cacctgtcgtggctctctgattggctgcggcagaggcggggcctggctcccttcacccag
tgcatgtcccccacccacatgagaggcctcaacgtccctgatgtgcagaaacgagaattc
atttgtacaggccctactcagtccgagccgaggtcttgtgctccccaagcgtccgtctgt
cctgccagctgcacctgcaacaccaacttcgttgactgtaggagaaaaggtcttaccgaa
atcccagccaatctgcctgagggcatcgtagaaattcgtctggaacaaaacctgattaag
agcattccacctggggccttctctccatataagaaactgaaaagaatagatctgagcaag
aatcagatttcagacatcgctgatgacgccttcagcggcctccgctccctcacctcactg
gtgctgtatgggaacaaaattactgagatccccaaaggcttgtttgatggccttgtctcc
ctgcaactgctgctgcttaatgccaacaagatcaactgcctgagggtgaacacgttcaaa
gacctgcagagtctcaatctgctctctctctatgacaacaagctgcagaccatcagcaaa
ggcctgttcaccccactgcgctccatcaagaccctacatcttgctcagaatccctttatg
tgtgactgccatctgaagtggctggctgactacctgtttgacaatcccatcgagacaagc
ggggcgcgctgcagccacccgcgccgcctcgccaacaagcgcatcagtcagatcaagggc
aagaagttccgctgcacaggctcagaggactatcggagtcgtctaacaggcgagtgtttt
caggacctcgtgtgccctgaacgctgtcgctgtgagggtaccgtggtggattgttccaac
ctcaaactcaccagcatccctcctcaccttcctgaacacactactgatctgcgcctaaac
gacaatgaaatctcatcgctggacaccatgggggcttttaagaagctcccaaaccttcgg
aagataaacctgagtaacaataagctgcgggagattcgggagggtgtgttcgatggcgct
ggcagcatccttgagctcctactcactggaaacaagctacaggctgtccacgggcgcatg
ttcagaggcctgagtggcctcaaaaccctgatgctgaggagcaaccagatcacctgtgtg
gacaacaccaccttcacgggcctcagctcggtacgtctgctgtctctctatgataaccga
atctccacgatcgtcccgggagccttctccaccctgcactccctctccaccattaacctg
ctgtccaacccatatgtatgtgactgtcatttggcatggctgggccagtggctgaagaaa
accagggtggtgagcggaaaccccagatgccagaagcctgctttcctgaaggaaatcccc
atacaggacgtggctacgcctgacttcacctgcgatggtatagacgagaatatctgcttg
ccatcagtccctcgctgtccagacccttgcacatgctccgatacagtggtgcgctgcagt
aaccgcggactgcgctctctgcccaagggcatccccaaggataccacggagctgtatctg
gaaggaaacctgctcacctcggtgcccaaggagctgagctatctgaaacaactgctgctt
gtagacttgagtaacaacagtatcagctctctgactccgttcatcttcagcaatatgact
cagctttccacacttatcctgagttataatcagatccgctgtgtaccggtgcacgcgttt
gacggactgcgctcactccgtctgctgactctccacggaaacgacctttcaactattcca
gagggagccttcaaccacttgacgtctctgtcacatctggctctgggtgcaaacccacta
tattgtgattgtgagcttcgctggctctcacagtgggttaaagctggttttaaggagcct
ggcattgctcgctgtactggaccacctgacatggctgaccgtctgcttctgaccacgccg
ctcaatcgcttccagtgcaatggtcctgttgatctgaatatgatgtctaagtgcgccccc
tgcctggccaacccatgccagaacaacggcacgtgcgttagtgatgtcacaggttcatat
cactgcacctgtccctttggctacaagggacggaactgtgagatcctcacgaatgcctgc
ctgagccaaccctgcatcaatggaggcacatgtcacctttctcctggtcaggatggccat
tacagctgtgtgtgtatgcctggttttgagggccagcgatgtgaggtgaaccccgatgac
tgtgaagacaatgattgtgagaataactccacttgcgtggacggcatcaacaactacacc
tgcgtctgcccttctaactacagaggagacctgtgtgaagaggtggtggacccctgcctg
cctgggtttgacccctgccagcacgactccaagtgtgtgcctctcagtaagggctacagg
tgcgagtgtttgccaggttatgtggggcagcactgtgagcaggactacaatgactgtctg
gagaacaagtgtcagcatggggctgagtgtgtggatgccatcaacggttacacatgtgtc
tgcaaggatgggttcaatgggctgttttgtgagaaccctcctcccatgatcttgctacag
aagacgagtccatgtgagcagtcggactgtcagaacagagctcagtgtctcttgattgag
ggtgaacctgtgtgtcgctgtctacctggcttctttggcaacaagtgccagaagatgctt
accgcacacttcctcgggaaagacacatacatagagctacccgggtctactatccgtcct
tccactcacatatccctgcaggtggctactgataaggacaatggcatgctgttttataag
gaggatcatgaccctttggctgttgagctgtatcaaggccacattcgactgatgtatgac
atcgccaagtaccctcctacaactgtgtacagtgtggaatcggtgaacgacggactcttc
cacacggtggaattgttgatccagaatcaaactttgagtctggtggtagataaaggagcc
cctaagagtctgggcaaactggcacggccaccatcagtggagcccaacacccacctttac
atcggaggagtgccgtctgggatcagcgccattggactgcgtgcgggagctgagcgcaca
tcccagtccttcaacggctgcatccataacgtccgcatcaacggagagctgcaggagctg
agcactgggctgacaggcacagagggcatcctgcctggctgccactcgtgcactgtgtgc
gcacaggggccgtgcaggcagaggggcgaggtgggcgtgacctgtgagtgtcctaccagc
agcagcggcccactgtgtgagcaacagggctacgctaacccctgtcagtccagcagatgt
gtgcatggcctgtgtgtgcctaagggttcgtcctacagctgtaagtgtgcacagggttac
gtgggtcagtactgtgacaggagagaggagccagccgcctgcagggggcagtactgtgtg
catggggaatgcagagtggatgagagtggaaatcctgcatgccactgccagcccgggtac
acaggcagcacctgtgacaccgagctgacgtgtcagggcgagatggtccgtgagctgctc
aagcgtcacataggccagaagacatgcacatccaccagtaaagtaccccgggtggattgt
ccacgctcgtgtcagccaggactctgctgcgcccccaccaagagccgcagacggaaagtc
agcttcaagtgctcggacggctcctccttctccgaagagatagagacgatcttggagtgc
agttgctcgaaatgtccttcataa
DBGET
integrated database retrieval system
