Neoarius graeffei (lesser salmon catfish): 132890867
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Entry
132890867 CDS
T10798
Symbol
si:dkey-219c3.2
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132890867 (si:dkey-219c3.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngra03021
]
132890867 (si:dkey-219c3.2)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132890867 (si:dkey-219c3.2)
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132890867 (si:dkey-219c3.2)
Coactivators
SAGA/TFTC/STAGA complex
132890867 (si:dkey-219c3.2)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
132890867 (si:dkey-219c3.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
132890867
NCBI-ProteinID:
XP_060784152
LinkDB
All DBs
Position
8:70756046..70915486
Genome browser
AA seq
1000 aa
AA seq
DB search
MHFAAKQRTRTTRSVERLPKMAGVPDPLEDMLYSEVDEKAVSDLVGSLESELGGQSKGHS
EARRSGAHESGNSNLGKAQAGTALEARAAGLPRVEVKQENGSERTPRHNSEPVPAAGNAG
ALMATNRVQPNSTLVPKPAVPGLATSPNCSSDAAVVASSSSSSSSSSSSATDTLPSTNHI
ASPVRAVSSRAQVGENGSSATGPLSSPAPTPGVNGAVIASASASGTTNSSTSTSKGTNGT
FLAPNHILSQPASLSTTQAVPAGALHRPSNITSNPSDPKLTAPVSVASVPASTLPTSSAS
LIKTNPQTQIKTIVPNQLAGSSVTVRPPVTVHSGAVSSPVPVASTPSVLVKQEAGLTAQA
AGMLRPAAPSPAASTVPVRPGVPAAPAPRAVVPQLTVRPQQQTTIQLPPGFTIPQGMVLV
RTEAGQLVLVPQQVLAQAKAQNQTKAALSPTPATTTTGATIRVTTSVPQSPVTSQAIRPI
SPAQAKVVQAASPASPALQKTPLVTASAAQKPSGPTVITTGARVQVPNQTLLKPSPTVTA
PAAPTTGITGLSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVKALVQDLLDAKIEP
EEFTNRLQTELKSSPQPYLIPFLKKSLPALRMTLLNSQQSLTQLAQTSSSSLTVSAIKAP
PPRSLTTTVPAVRPTGAQDQASLMAVKRTGPQTGPVRMPVVITQSVRPQGAVVRGPVVQV
RGPVGIAIQASANQKQKLNDPGGGTFRDDDDINDVASMAGVNLNEENARILATGSELVGT
QIRSCKDEAFLPANVLHKRILEIARGFGVTEVMADVVSLVSHATEARLRSTLENVSALAR
HRTESSRDEEHHEQTSDVRAQLKFFEQLERLEKQRKDDEEREILLKVAKSRSRQEDPEQA
RLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKPDSPGASGAEASGSSSGSAGASS
SSARQVRQRITRVNLRDLIFCLEQERSTAHSLLLYKALLK
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgcacttcgcggcaaaacaacgcacgcgcacgacacgctctgtcgagcgtcttccaaag
atggcgggcgtccccgatccgctggaagatatgctgtattctgaagtggacgaaaaagcc
gtcagtgacctcgtgggttcgttagagtcggagctgggcgggcagagtaagggccacagc
gaggcgcggaggtccggagcgcacgagagcggaaacagcaacttaggaaaagcccaagcg
ggaaccgcattggaggcgcgagcggcaggactgcccagagtggaggtaaagcaggagaac
ggctccgagaggacaccgagacacaactccgagccggtccctgccgctggcaacgccggc
gcgctgatggcgaccaaccgagtgcagccaaacagcacgttagtaccaaagcccgctgtg
ccgggactcgcaacttctcccaactgttcaagtgacgcagcagttgtagcatcctcatcc
tcctcatcctcatcctcctcatcctcagctaccgatactctccccagcacaaatcacatc
gcttcacctgtccgtgccgtgtcctccagagcccaggttggtgagaatggcagcagtgcc
actggacctctgtcctctcctgctcccactcctggtgtgaacggtgctgtcattgcctct
gcctctgcctctggcaccaccaacagcagcacatccacttccaaaggcactaatggtact
tttcttgctcctaatcatatactgtctcagcctgcaagtctatcaactacccaagcagtc
cctgctggtgccctgcaccgaccttccaacatcacgtccaatcctagtgaccctaaactt
acagcgcccgtaagcgtcgcctctgtcccggcctctacgctgcccacctccagtgcgagt
ttgatcaaaacgaaccctcaaacccagattaaaactattgtcccgaatcagctcgctggt
tcgtctgtaaccgtacggcctcctgtaaccgtgcactcgggtgccgtgagttccccggtt
cctgtcgccagcaccccgtcggtactggtgaaacaagaagcaggtctgacagcgcaggct
gctgggatgctaagacctgctgctccgtctccagcagcgagcaccgtgcctgtacgacct
ggggttcctgcggcacctgctcccagagcggtggtgcctcagcttacagtcagacctcaa
cagcagaccacgattcagttaccaccaggattcactataccacaaggaatggtgcttgtc
cggaccgaagcaggccagttggtgttggttcctcagcaggttctggcccaggcgaaggct
cagaatcagacgaaagcggctttgtctcctacgcctgcgacgaccacaaccggcgctacc
atccgagtcaccacatctgtgccgcaatcgccagtgacctcccaagccatccgaccgatt
tctcctgcacaggctaaagtggtccaggcagccagtcctgctagccctgctctacagaaa
acccctttggtgacagcgagcgctgctcagaagcccagcggccccactgtgatcacaacc
ggagctcgtgttcaagttccaaatcagacgctcctgaaaccctcacccactgtcacggca
cctgctgcacccaccacaggaatcaccggcctctctcaggaaatgcaagagaatgtgaag
aaatgcaagaatttcttagcaacgttgatcaaactggcatcccataattccccctctccg
gaaacctcaaagaacgtgaaggcgctcgtgcaggacctgctggatgccaaaattgagcct
gaagaatttacaaatcgtctgcagacggagctgaagtcgtctcctcagccctacctcatc
ccctttctgaagaaaagcttgcctgctctgcggatgacgctgttgaactcgcagcagtct
ctgacccagctcgctcaaacctcctccagctctctgactgtgagtgcaatcaaggctcca
cccccacgctccctcaccaccacggtgcctgctgtccgccccaccggtgcacaggaccaa
gcctccctaatggctgtgaagaggacaggaccacagacaggtccagttcggatgcccgtg
gtgatcacccagtcggtccggcctcaaggcgctgtggtgagagggccagtggtacaggtg
agaggtccagtgggcatcgccatccaggcttcagccaatcagaaacagaagctgaatgac
ccaggaggtggaactttcagggatgatgatgacatcaatgacgtggcgtccatggcgggc
gtgaacctgaacgaagagaatgctcgtatattagccacgggctctgagctggtgggcacg
cagatccgctcctgcaaagacgaggcattcctgccagctaatgtgctccacaagcgcatc
ctcgagatcgcacgtgggttcggtgtaaccgaggtgatggcagacgtggtgagtttggtg
tcccacgccaccgaggccagactccgttccacgctggaaaacgtctctgctctcgcacga
caccgcacagaatccagcagggatgaagagcaccacgagcagacgtcagacgtgagggca
cagctgaagttcttcgagcagctggagaggctggagaaacagcgcaaagacgacgaggag
agagagatcctgctgaaagtggccaaaagtcgctccaggcaagaagaccctgagcaggct
cggctaaagcagaaagctaaagagatgcagcagcaggaactggcacaaatgagacagcga
gatgcgaacctcactgcactcgccgctatagggccacgcaaaaaacgtaaaccggactct
cccggggcttctggagcagaggcatcaggaagctcctcaggctcagccggcgcctcctcg
tcctccgctcggcaggtgaggcagcggataacgcgggtcaacctcagggacttgatcttc
tgcctggagcaggagcgctccacggcccactcgctgctgctctacaaggctctgctcaag
tag
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integrated database retrieval system
