Neoarius graeffei (lesser salmon catfish): 132890935
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Entry
132890935 CDS
T10798
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04110
Cell cycle
ngra04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
132890935 (smc1b)
04114 Oocyte meiosis
132890935 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngra03036
]
132890935 (smc1b)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
132890935 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
132890935 (smc1b)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
SlyX
Motif
Other DBs
NCBI-GeneID:
132890935
NCBI-ProteinID:
XP_060784307
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Position
8:complement(80966464..81034890)
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AA seq
1235 aa
AA seq
DB search
MGYLKQIDVENFKSWKGKQTIGPFKRFTCIIGTNGSGKSNVMDALGFVMGERASSLRVKQ
AKDLIHGAHINKPVSRTASVTMRFCNDNDEETVFCRTISGDSSEYRVNGKQVALSRYTAE
MEKIGIVVKARNCLVFQGAVEAIAMMNAKERTKMFERISNSLELANEYDTKQAALQKAKE
DTQFHFNRKRAAAAEKKQVFKDKTEAEKYQALVEQLSESKLQLSLFQLYHNERGINALVE
SLREKQEAVAVKKSVVEELEQTVKAQKKEHGRLSRELQKLEKEIKSQEETLNHQRPQYIR
AKVNTSHHQRKVDETRTSLLKSQKQEAKKEQELQELETELQELERAWRVYEREIEERAAQ
RGEDVHLEEAQLERYKELKELARKKGAVLFQRAEKLHWEVKADQEKLEFDKRRTSEVEAN
IKHAEDHLDELNRRAGKLEEYAITSNKSLDELREQERSLGEMLERGRLRRLEVNEELGVV
VQELQNARMDSQENRRQQKRDEILESLRRLYPDVVYGRLMDLCQPIHKKYQLAVTKVFGY
YMNAIVVSSAKVARDCIQILKEERAERETFLPIDNLDVKPLNERLREVRGAKMVVDVVQC
SQNAPQLKRVVQFVCGNSLVCENLKDARYIAFGGPERLKTVSLDGTLFSKSGVISGGSVY
LRSKARRWEEKDMNGLKERKEQLSAELRELIKLKRKEVELHQLTAQAQGIQTRLKYSNSE
LESIRKKTIPACQAEISKLESELSNLKSQIEMQTSNVQVKDSEVTALQDEVNHMEDTVFS
DFCAEIGVANIREYEQDFMRQQGEIENKRLQFESQRTRLNTQFEYEQEQLHKQRRLIKKM
EDSIKKEEDVILMLKKEEEKLLAAVDESQSKLLVLKNKQVEQTSYINKAKAELDKRISGL
QQNSRELVKLQKEMISVETALEHQRLGKHNLLLGCKIEGVPLTVLSGSLDDISDIQLDSE
SVSTTTQDIYERERQIVIDYRPLGDNLKSLTEQQEVMDQLEVLREKLSSLERLIHVSKPP
NMKALEKMIEVKDSFRGVVDAFEASASVAKKCHQEFEQVKAKRFHRFSQCFEHISVTVNN
IYKDLCRNDSAQATLSAENPDEPFLGGISYNCVAPGKRFMAMDNLSGGEKSIAALALVFA
IHSFRPAPFFVLDEVDAALDNTNIGKVTSFIREQSRNNFQVIVISLKEEFFSRSDALLGI
YSEFNDCMSSHLLSVDLTPYPLNDDNGKERHKDMM
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggctacttaaagcagatagacgtggaaaatttcaagtcgtggaaaggaaagcagaca
ataggcccgtttaagaggttcacttgcatcattggcactaatggttcgggtaagtcaaat
gtgatggatgctctggggtttgtgatgggagagagagcctccagtctccgagtgaagcaa
gccaaagatctgattcatggcgcccacatcaataaaccggtctcacgcaccgcctcagtc
actatgcgcttctgcaacgataatgacgaagaaacggttttctgcagaacgatatccggt
gactcctctgagtaccgagtcaatggcaaacaggtggcactgtccaggtacacagccgag
atggagaagatcggcatcgtggtgaaagccaggaactgcttagtgtttcagggtgctgta
gaggccatcgctatgatgaatgcaaaggaacgcacaaagatgtttgaacgcatcagtaac
tccttggagctggcgaacgagtacgacaccaagcaggcagcactgcagaaagcaaaagag
gacacacagttccattttaatcgcaaacgggcagccgctgcagagaagaaacaggtgttc
aaggacaaaactgaggcagagaaatatcaggcactggtggagcagctcagtgaaagcaag
ctgcagctcagccttttccagctttatcacaatgagaggggtattaatgcgctcgtggag
tccctgagagagaaacaggaggctgtcgctgtcaaaaagagcgtagtggaggagttggag
caaactgtgaaggctcagaagaaagaacacggacgcctgagccgagaactacagaaacta
gagaaggagatcaagtcccaggaagaaaccctaaaccatcagaggcctcagtacatcagg
gccaaagtgaacaccagtcaccaccagcgcaaggttgatgagacacgcaccagcctgctg
aagagccagaagcaggaagccaagaaggaacaggagctgcaggagttggagacagagctg
caggagctggagagggcttggagagtttatgagagggagatagaagagcgggcagctcag
aggggcgaggatgtgcatctggaagaagctcagctggagcgttataaggagctgaaggaa
ctggccaggaaaaagggggctgtcttatttcagagggctgagaagctacactgggaggtg
aaggctgatcaggaaaaactggagtttgacaaaaggcgaacaagtgaagttgaggcaaac
attaagcatgctgaagatcatctggacgagttaaacaggagggcagggaaactggaggag
tatgccatcacctctaacaaatccctggacgagctgcgggagcaggagcggagcttgggg
gagatgttggagcgcggacggttgcggaggctggaggtgaacgaggaactgggagtggta
gtgcaggaacttcaaaatgctcgcatggacagccaggagaatcggagacagcagaaaaga
gatgagatccttgagagcctgcgcagactctacccggatgttgtgtatggacgcttgatg
gacttgtgccagcccatccacaagaaataccagctcgctgtcacaaaggtgtttggctat
tacatgaacgccatcgtcgtgtcctctgcaaaagtggcccgtgactgtattcagatttta
aaggaagagagagccgagcgagagaccttcctccccattgacaacctggatgtaaagccg
ctaaacgagcgtctcagggaggtgcgcggagccaagatggtggtggatgtggtgcagtgt
tcccagaacgcacctcagctgaagagagtggtgcagtttgtgtgtgggaattccctcgtg
tgtgagaatctgaaagacgcccgctacattgcgttcggcggcccagaacgccttaagact
gtgtctttggatggtaccttgttctccaagtcgggggtgatctccggtggctctgtttat
ctgcgcagtaaagctcgacgctgggaggagaaggacatgaacgggttaaaagagcggaag
gagcagcttagtgcagagctgagggaactaataaaactgaaacgcaaggaggttgagctt
catcagctcacagcccaggcccagggaatccagactcgcctcaaatactccaactctgag
ctggagtccatccgcaaaaaaaccatccctgcctgtcaggctgaaatctccaaactggag
agtgagctctcaaacctgaagtctcagattgagatgcagaccagtaacgtgcaagtgaag
gacagcgaggtgacagcgctccaagatgaagtcaatcacatggaggacacggtgttctca
gacttctgtgctgagattggagtagccaacattcgtgagtacgagcaggattttatgagg
cagcaaggagagatcgagaataagcggctacagtttgagtcccagcggacccgtctgaac
acacagttcgagtatgagcaggagcagctgcacaaacagcgcaggctgatcaaaaaaatg
gaggactccattaagaaagaagaagatgtcatcctcatgttgaaaaaggaggaagagaag
ctgcttgctgcagtagatgagtctcagtcaaagctcctagtcttaaagaataagcaggtg
gaacagacgtcttacattaataaagcaaaggctgagctggataaaaggatcagtgggctt
cagcagaactccagggaactggtaaagctgcagaaggagatgatctctgtggaaactgcc
ttggagcatcagagacttggcaaacacaacctgctcctgggctgcaaaatcgagggcgtg
cctctcaccgtgctctcaggatcactggacgacatcagtgatatccagctggactctgaa
tctgtaagcaccaccacacaagacatttatgagcgagaaagacagattgtgatcgactat
agaccactgggagataacttgaagagtctgactgagcagcaggaggtgatggaccagctg
gaggtgctgagagagaaactgtcgtctctggagagactaatccatgtgtccaagccaccc
aatatgaaggccttggagaagatgattgaagtgaaggacagcttccgtggagtggttgat
gcatttgaggccagcgcaagtgtagctaagaaatgccatcaagagtttgagcaagtgaag
gccaaacgcttccatcgcttcagccagtgcttcgagcatatttctgtcaccgtcaacaat
atctacaaagacctctgcaggaacgacagtgctcaagcgactctgagtgcagaaaatcct
gatgagcctttcctgggtggtatcagttataactgtgtggcacctgggaagagatttatg
gccatggacaacctgtcaggaggagagaagtcaatcgcagcgctcgctctggtgtttgct
attcacagcttccgtccggctccattctttgtgctggatgaggtggacgctgctttggac
aacacaaacattggcaaggtgacgagcttcattagggagcaatcaagaaataactttcag
gtcatcgttatctcactgaaggaggagttcttttcacggtcagatgctctgctggggatc
tactctgagttcaatgactgcatgtccagccacctcctgtcagtggacctcacgccgtac
cccctcaacgacgacaacggcaaagagagacacaaagacatgatgtaa
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