Neoarius graeffei (lesser salmon catfish): 132891001
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Entry
132891001 CDS
T10798
Symbol
bmal1a
Name
(RefSeq) basic helix-loop-helix ARNT like 1a
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132891001 (bmal1a)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
132891001 (bmal1a)
SSDB
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Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
bHLH_IRO3
PAS_4
bHLH_INO2
PAS_2
bHLH_NCOA
bHLH_NPAS4
PAS_8
bHLH_HIF1A
Motif
Other DBs
NCBI-GeneID:
132891001
NCBI-ProteinID:
XP_060784411
LinkDB
All DBs
Position
8:86738598..86778846
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AA seq
646 aa
AA seq
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MLLNASGHLEPQRRTSRDDLMADQRMDISSTMNDFMSPSSTELISSSVGTPGMDYTRKRK
GSATDYQLDGFPFDDGMDTDKDKQLGRDDQQGRIKNAREAHSQIEKRRRDKMNSFIDELA
SLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPAFLSDDELKHLILRAAD
GFLFVVGCDRGKILFVSESVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPR
ERLIDAKTGLPVKTDITPSPSRLCSGARRSFFCRMKCNRPSVKMEDKDFPSTCSKKKADR
KSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHPHIVPQPANGDIRVK
PTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHLIECHRQVLQMR
EKISTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVSGSVLEGTEANYPQS
ASSPQSMDSVLTSGDGGGKRALQTVPGIPGGTRAGAGKLGRMIAEEVMEIQRIRGSSPSS
CGSSPLNITSTPPPDTCSPGGKKIQNGGTPDLPSSGLVPGPDSIGYPYSNNPIMSDNSHL
SIDIMDEPGSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgaacgcctcgggacacttggaaccccagcgtcggacttcacgtgatgatcta
atggcggaccaaagaatggacatttcctccacaatgaacgacttcatgtcccccagttcc
acagagttgatcagtagttctgtcgggacgcccgggatggactacacacgcaagaggaag
ggcagcgctacagactaccaactcgatggatttcctttcgatgatggtatggacacggat
aaggataaacaattaggaagagacgaccagcagggccggataaaaaacgccagggaagcc
cacagtcagatcgagaagaggcgcagggataagatgaacagttttatagatgaactggcg
tcgttagtgccgacgtgcaacgccatgtctcgcaagctggacaagctgacggtcctgcgc
atggctgtgcaacacatgaagacgttacgaggagctacaaacccgtacacggaagcaaac
tacaagccagcgtttttatccgacgacgaactcaagcatctgatactgagagccgccgat
ggcttcctgttcgttgtaggatgtgatcgcggtaaaatcctgtttgtctcggagtctgta
tacaaaattctcaactacagccagaacgatctgattggtcagagcctgttcgactacctg
catccaaaggacatcgccaaagtgaaagagcagctctcgtcctccgatacggcaccaagg
gaacgactgatcgatgccaaaactggtttgcctgtaaagacggacattactcccagtccc
tccaggctctgctcgggggctcgtcgctccttcttctgtaggatgaagtgcaaccggccg
tctgtcaaaatggaggacaaagactttccctccacctgctccaagaagaaagcagaccgg
aagagcttctgcaccatccacagcacgggttacctgaagagctggcctcctaccaagatg
ggcctggacgaggacaacgagcctgataacgagggctgcaacctgagctgcctagtggcc
atcggccgtctgcacccccacatcgtccctcagccggcgaacggagacatccgcgtcaaa
cccaccgagtacgtctcccgccacgccatcgacggcaagtttgtcttcgtcgaccagaga
gcgacggccattctcgcatatttacctcaggagcttctgggaacgtccttctacgagtat
ttccatcaggacgacatcggacatctcatcgaatgccacagacaagttctgcagatgaga
gaaaagatcagcaccaactgttacaagtttaagatcaaagacggctccttcatcactctg
agaagccgctggttcagtttcatgaacccctggaccaaagaggtggagtacatcgtctcc
accaacaccgtggtctcaggcagcgtgctggaaggaacggaggccaactaccctcaatcc
gcttcctcgcctcagagcatggacagcgtgctgacgtctggagacggtggagggaaacgg
gccctccagacggtcccgggcatcccaggaggcacgcgagccggagccggtaaactcggc
cgcatgatcgccgaagaggtgatggagatccagaggattcgaggctcgtctccgtctagc
tgtggttccagcccactcaatatcaccagcactccaccaccggacacctgctcgccgggg
ggcaagaaaattcaaaacggtggaaccccagacctgccgtccagcggactcgtacctgga
ccggactcgataggatacccgtactccaacaaccccatcatgagtgataactcccacctc
agcatcgacatcatggacgagccgggctccagcagccccagtaacgacgaggcagccatg
gccgtcatcatgagcctgctggaggccgacgccggtctcggaggcccggtggacttcagc
gatctgccctggcccttgtga
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