Neoarius graeffei (lesser salmon catfish): 132891037
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Entry
132891037 CDS
T10798
Symbol
det1
Name
(RefSeq) DET1 homolog
KO
K10571
de-etiolated-1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132891037 (det1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132891037 (det1)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
132891037 (det1)
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Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
132891037
NCBI-ProteinID:
XP_060784468
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Position
8:91371130..91577404
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AA seq
551 aa
AA seq
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MASSEDEFQTLKPRRIQNQNVVHRLELRRISSGRPGAHWYRVRCFHQNLFPNFTAVNVEK
PPCFLRKFSPDGRCFVAFSSDQTSLEIYEFRGCQAAEDLLQDHDEGRDGEVLSESVRARL
FSRFFSLLHVTSVASNGEHLNRECSLFTDDGRYVIVGSAAYLPDEPQPHFFEVYRNNEAV
TPNPRSPLEDYSLHIVDLHTGRLCDTRAFKCDKIILSHNQGLYLYRNILAILSVQQQTIH
VFQVTAEGTFLDVRTIGRFCYEDDLLTLSAVYSEAQVEGPAGFSRLYKEKSISSLKHRLL
VFLWRRAERDGSATAKRRFFQFFDQLRQLRMWKMQLLDENHLLIKYTSEDVVTLRVTDPS
QPSFFVVYNMVSTEVIAVFENTSDQLLELFENFCDLFRNATLHSEAVQFPCSASSNNYAR
QVQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVSVMERP
KTCGDHPIRFYARDSGLLKFKIQAGLLGRPINHTVRRLVAFTFHPFEPFAISVQRTNAEY
VVNFHMRHSCL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcggaagatgagttccagaccctgaagccgcgccgcattcagaaccagaat
gtggtgcacagactggagctgcggcgcatcagctcgggccgacccggcgctcactggtac
cgcgttcgctgtttccaccagaacctcttcccaaatttcaccgccgtgaatgtggagaag
ccgccgtgtttcctgcgcaagttctctccggatggccgctgcttcgtggcgttctcttcg
gaccagacctcgctggagatctacgagttccgaggctgccaggcggctgaggatctgctc
caggaccacgacgagggccgagacggcgaggttctgagtgagagtgtgcgagcccgtctg
ttctcgcgtttcttctcgctgcttcacgtgactagcgtggcgtcaaacggcgagcacctg
aaccgcgagtgcagcttgttcacggacgatgggcgctatgtgattgtgggctcggcagcg
tacctgcctgacgagcctcagccgcactttttcgaggtttatcgcaacaacgaggcggtg
actccgaacccgcgctcgccgcttgaggattactcgctccacatcgtcgacttgcacacg
ggacgcctctgcgacacgcgcgcctttaaatgcgataaaatcatcctgtcgcataatcag
ggactttacctgtacaggaacatcctcgccatcctctcggtccagcagcagaccatccac
gtctttcaggtgacggcggaggggacgttcctggacgtgcgtacaatcgggcggttctgt
tacgaggacgacctgttgacactgtcggccgtgtactcggaggcgcaggtggagggcccg
gccgggttctcgcgcctctataaggagaagagcatcagctctctgaagcaccgcctgctg
gtgttcctgtggagacgagccgagcgtgacggcagcgccaccgcgaaacgccgcttcttc
cagttcttcgaccagctgcggcagctgcgcatgtggaaaatgcagctgctggatgagaat
cacctgctgatcaaatacaccagcgaggacgtggtgaccctgcgcgtcactgacccctcc
cagccgtctttcttcgtggtgtataacatggtgagcacggaggtgatcgcggtgtttgag
aacacgtctgatcagctgctggagctgtttgagaatttctgtgatctgttccgtaacgct
acgctacacagtgaggctgtacagttcccctgctccgcctccagcaacaactacgcccgg
caggtccagcgcaggtttaaggacactatagtgaatgcgaagtacggcggtcacacggag
gcggtgcggcgtttactcggtcagctgcccatcagcgctcagtcatacagcagcagcccc
tacctcgacctgtcgctcttcagctacgacgacaagtgggtctccgtcatggagcgacca
aaaacctgcggagatcaccccatacggttttacgcgagagactctggtctgctgaagttt
aagatccaggctggtcttctgggtcggccgataaatcacaccgtgcggcgcctcgtcgcg
ttcaccttccacccgttcgaaccgttcgccatctccgtgcagcgcaccaacgctgagtat
gtcgtcaacttccacatgcgccacagctgcttgtga
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