Neoarius graeffei (lesser salmon catfish): 132891248
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Entry
132891248 CDS
T10798
Symbol
sox1a
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132891248 (sox1a)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132891248 (sox1a)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
132891248
NCBI-ProteinID:
XP_060784711
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All DBs
Position
9:46175291..46180222
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AA seq
284 aa
AA seq
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MYSMMMETDLHSPGPQTNTNPGQTGPNTGNKANQERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLGGAATGAGVGLGVGMSAAGVGQRLESPGGHGGSGGAGYSHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYGQHPGSGAHHHHHPHAHHHHPHNPQPMHRYDMSALQYSPISS
SQSYMSASPPGYGGISYSQHQNAGVASSAAIGTLSSLVKSEPNG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggagacggacttacactccccgggaccccagaccaatacaaac
ccggggcagacaggtccgaatacggggaacaaagccaaccaagagcgcgtcaaacgccct
atgaatgcttttatggtgtggtcccgcggtcagcgccggaaaatggctcaggaaaacccg
aaaatgcacaactctgagatcagcaagagactcggcgcagagtggaaggtgatgtcagaa
gctgaaaagcggccctttattgacgaggcaaaaaggcttcgcgccatgcacatgaaagag
catccggattacaaataccgaccgaggcgcaaaaccaagacgctgcttaaaaaggacaag
tactctctggctggcggtctgctcggcggagcggccacgggcgctggagttggcctcggg
gtgggcatgagcgcagccggagtaggccagaggttagaaagtcccgggggtcacggaggc
tcaggcggcgccggttactcgcacatgaacggttgggcaaacggcgcgtattcgggccaa
gtggctgccgccgctgctgctgccgctatgatgcaggaggcgcagctcgcctacgggcag
catccaggcagcggggcacaccatcaccaccacccccatgcccaccaccatcatccgcac
aacccgcagccaatgcaccgctacgacatgagtgctctgcagtacagccccatatccagt
tcacagagttacatgagcgcgtcgccgcctggctatggaggaatttcctactcgcagcac
caaaacgcgggtgttgcgtcgtcggccgccatcggcacactgagctctttggtcaagtcc
gagccgaacgggtga
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