Neoarius graeffei (lesser salmon catfish): 132891392
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Entry
132891392 CDS
T10798
Symbol
tspearb
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ngra03037
]
132891392 (tspearb)
04990 Domain-containing proteins not elsewhere classified [BR:
ngra04990
]
132891392 (tspearb)
Cilium and associated proteins [BR:
ngra03037
]
Other cilia and associated proteins
Stereociliary proteins
132891392 (tspearb)
Domain-containing proteins not elsewhere classified [BR:
ngra04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
132891392 (tspearb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_1
DUF3747
Motif
Other DBs
NCBI-GeneID:
132891392
NCBI-ProteinID:
XP_060784886
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All DBs
Position
9:complement(91773662..91813896)
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AA seq
679 aa
AA seq
DB search
MNAALMLLKFVILFCCFISSWSAPWRPCTGTLPHLEQHLLPLDLLHSVLPVVGSHQTQVR
MVQSQGSRGLKLSGPPKALSFPSSEIFTNCNFFPAEFSIVVTLKIPNINPDKDEYIFTLL
DGDSDELLVGLRLAHDKVHFLQRIDDRMERVTFRQVNMADGHWHTMVLALSGHYAVLTLD
CGIPVELQLEKPFPEQLYIAGSKFFIGSRRRWSGLFSGLIRQLVLMPGSDASSRLCPSSD
PTLSVLSVPQILLHLPVKPPTNQLPLYPYEAELRVSQRVPPVCVSAVVGQLWFSTEKRSL
FLCNGTTWITMLHEKEKLDYVEDHQDLFTNSETFDIEVFQLPSFGLFIATANRDSSYGSA
IYRWTNGRFERFQNINTYDAQAWKFFTVGKKRFLVVANSRRSNSNKCELSVIYKWRMKKQ
CFVEYQKIETHSARDWEAFRIQDDNFLAVANHREGEMNHNIDSVIYRWNRQTRKFEVNQT
ISTSGAYDWEFFTIGLYHFLVVANTFNGKSTDISSTIYIWMGGKFQPFQYITTFGAIDWE
MFQIDNRFFLAVANSQKFSESSTVIYNINSTIYELNTTSQSFIKFQDIATSSALDWEFFT
VGDDKFLVVANSYDGASYSLNSVVYRWQGYEGFVPVHRLNTHGCRDWEFFTSSDGSYLIS
SSARAAYSKVLKLKTYFQR
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagctctgatgctgctgaagtttgtcatccttttctgctgtttcatcagcagc
tggtcagcaccatggagaccatgcacaggtacacttccacacctagaacagcatctgtta
cctctggacctgctgcatagtgtccttcctgttgtaggcagtcaccagactcaggtccgg
atggttcaatcccagggttcaagaggactgaagctctccggacctccaaaggctctgagt
ttcccatcatcagagatcttcaccaactgcaacttctttcctgctgagttctccattgtg
gtcacactgaagatccccaacataaatcctgataaagatgaatacatattcactcttttg
gatggagattcggatgagctgcttgtcggtcttcgtcttgcccatgataaagtgcacttc
ctacagcggatagatgacaggatggagcgtgtgaccttcaggcaggtgaacatggcagac
ggacactggcatacaatggtgcttgcactcagtggccactacgccgtactcactctggac
tgtggcattccagttgagctgcagctggagaagccatttcctgagcagctgtacatagct
ggctccaaattcttcattggcagcaggaggagatggagtggcctgttctctggtttgatt
agacagcttgtcctcatgccaggatcagatgcgtcctctcgtctgtgtccctcgtctgat
cccacactgtctgttctatcagttcctcagattctcttacacttgccagtcaaacctcca
accaatcagcttccactttacccctatgaggcagagttgcgtgttagtcagcgtgttcct
ccggtgtgtgttagtgctgtagtgggccagttgtggttcagcactgagaagagatcactg
ttcctatgtaatggtactacgtggatcaccatgctgcatgaaaaagagaagctggattat
gttgaagatcatcaggacctcttcacaaactcggagacatttgatattgaggtttttcag
ctcccatcttttggtttgttcatcgctacagcaaatcgtgactctagctatggttcagcc
atttacaggtggaccaatggcagattcgagcgatttcagaacatcaacacttacgatgct
caagcatggaaattcttcactgtgggaaaaaagaggttcttggtcgtggcaaactccaga
agaagtaacagtaacaagtgtgagctctctgtgatttataaatggagaatgaagaaacag
tgctttgttgagtatcagaagattgaaacacacagtgctcgcgactgggaagctttccgt
atccaagacgacaacttcctcgctgtggctaatcacagagaaggcgagatgaaccacaac
attgacagtgtgatctacaggtggaaccgacaaaccaggaagtttgaggtgaatcagacc
atctcaacatctggagcctatgactgggagttcttcaccatcggattgtaccacttcctg
gtggtagccaacacctttaatggcaaatccacggacatcagctccaccatctacatctgg
atgggaggaaaattccagccatttcagtacataacgacatttggagcaattgactgggag
atgtttcaaatcgataacaggttctttctggctgtagcaaactctcagaagttcagtgaa
tccagcacagttatctacaacatcaactccaccatctatgaacttaacaccacctcacag
agcttcattaagttccaggatatagcaacaagcagtgctttggattgggagttcttcact
gtgggtgatgataaattcctggtggtggcaaactcatatgatggagcttcatactcctta
aacagtgttgtatataggtggcagggttatgagggatttgtgcctgtgcacagactaaac
acgcatggatgcagagactgggaattcttcacttcctctgatggatcttacctcatttcc
tccagcgccagagctgcatactccaaagtgctcaagctgaaaacctacttccagcgctga
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