Neoarius graeffei (lesser salmon catfish): 132891418
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Entry
132891418 CDS
T10798
Symbol
sf1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132891418 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngra03041
]
132891418 (sf1)
Spliceosome [BR:
ngra03041
]
Complex A
Other components
Complex A specific factors
132891418 (sf1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
zf-CCHC_3
KH_12
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
132891418
NCBI-ProteinID:
XP_060784949
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All DBs
Position
1:76827825..76862584
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AA seq
680 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDSGPGAGLMPPPGPPASFPLQNFQQMPGAAFPGFPGA
AGSFPNPPITGPQSQGGDMSLKKRKRSRWSSETPDQKTIIPGMPTIIPPGLSREQERAYI
ALSPQRRCDVRTALSRACHTVSVRPPSCLPHQQSTELKVYQSLCKSPSPEPLYNSEGKRL
NTREYRTRKKLEEERHSLITEMVGLNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVG
LLIGPRGNTLKNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMEN
VKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQNTEPRSIT
NNTLCTKCGGAGHIASDCKFTSTYTQRQGDPPQSAQDKARMDKEYLSLMAELGEAPVPAS
GGAPNNPPPSGPRATGPSTNQPPPNRPPWMNSGPSDNRNFHGMHGGPGGHGGPHSFPPPM
PNMGGPPMPPNPNGMPPPWMQPPPPPMGQGPAPHGHPMGLLPPPMGMMPPPPPPPNNQPP
PPPSGPLPPWQQQAPPPPPTSSMATSAPLPWQQNTTTTSTPATGNLPPWQQPQPAATSAA
QPPPPMGNPSMVPPPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPNFVTMMG
IPGMPPFGMPPAPPPPPPQN
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggagcaaacgcaaccccgctggggaagctgcacccgagtatcggcgctaag
cggggcttcgactcggggcccggtgctggcttaatgcctccgcctgggcctccggcctct
ttcccgctacaaaactttcaacagatgccgggtgcggctttcccaggatttcccggggct
gctggttcatttccaaacccacccattactggaccgcagtctcaaggcggagatatgagt
ctgaagaagaggaaaaggagtcgctggagcagcgagacccctgatcagaagaccattatc
ccaggaatgccgaccatcatccctcctgggcttagtcgtgaacaggagagagcttatata
gctttgagcccacaacgacgatgtgatgtgagaacggctctctccagggcctgccataca
gtcagtgtgcggccaccatcttgcctcccccaccaacaatcaacggagttgaaggtttat
cagtctctttgcaagtctccttctcctgagccgctatataacagcgagggaaagaggttg
aacacacgcgagtaccgcacccgcaaaaaattggaagaggagagacattcgctcatcact
gagatggttgggctgaaccctgagtttaagccccctgcagactataagcctccagccacc
agagtcagtgataaagtgatgatcccacaggacgagtatccagaaattaattttgttgga
cttctcattgggccacgtggcaacacgctgaagaacattgagaaagagtgctgtgctaag
atcatgatccgtgggaagggttctgttaaagagggcaaagtgggtcgtaaggatggacag
atgctcccaggagaggacgagcctctacatgctttggtcactgcaaacaccatggagaat
gtcaagaaggctgtcgagcagatccgtaatatcctgaagcagggtattgagaccccagag
gatcagaatgacctgaggaagatgcagctgagggagctggcccgactcaatggcactctg
agagaggacgataacaggattctgcgcccttggcaaaatactgagccacgtagcattacc
aacaataccctgtgcacaaagtgtggaggagctgggcatatcgcctctgactgcaagttt
actagtacttatacccagaggcaaggtgatcctccccagtcagctcaggataaggcccgt
atggataaagagtatctgtctctaatggccgagctgggagaggctccagttcctgcttcc
ggtggtgcccccaacaaccccccacccagtggccctcgagcaactggaccaagcaccaac
caaccacctccaaaccgtcctccgtggatgaattctggcccttctgataacaggaacttc
catggcatgcatggtggcccaggtggtcatggaggtccccatagtttcccccctcccatg
cccaatatgggtgggccacccatgcctcccaaccctaatggaatgcctccaccgtggatg
cagccaccccctccacccatgggccagggcccggctcctcatggacacccgatgggtttg
ttgcctccacctatgggtatgatgccgccgcctccacctccaccaaacaaccagccaccc
ccgcccccatccggacctctgccaccttggcaacagcaggccccacccccgccacctacc
agcagcatggcaaccagtgcaccactgccatggcaacagaacaccactaccacttccacc
ccagctacgggtaacctccctccatggcagcaaccccagccagcagcaacctctgctgcc
caaccccctccaccgatgggaaacccctccatggtgccccctcctccaggagttcaaccc
ccactgccccctggtgccccccctcctccccctcccccacctccaggctcagctggaatg
atgtatgcaccccctccacctcctccacccatggaccccaactttgttaccatgatggga
atcccaggaatgcctccatttgggatgccacctgccccacctcccccaccaccccaaaat
taa
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