Neoarius graeffei (lesser salmon catfish): 132891511
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Entry
132891511 CDS
T10798
Symbol
ranbp2
Name
(RefSeq) E3 SUMO-protein ligase RanBP2
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03013
Nucleocytoplasmic transport
ngra03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132891511 (ranbp2)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132891511 (ranbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132891511 (ranbp2)
03110 Chaperones and folding catalysts [BR:
ngra03110
]
132891511 (ranbp2)
04121 Ubiquitin system [BR:
ngra04121
]
132891511 (ranbp2)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132891511 (ranbp2)
Chaperones and folding catalysts [BR:
ngra03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
132891511 (ranbp2)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
132891511 (ranbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
WH1
TPR_2
TPR_1
TPR_16
TPR_7
TPR_CcmH_CycH
KaiA
TPR_14
ANC1_spectrin
TPR_8
Motif
Other DBs
NCBI-GeneID:
132891511
NCBI-ProteinID:
XP_060785155
LinkDB
All DBs
Position
9:complement(20139961..20250790)
Genome browser
AA seq
2972 aa
AA seq
DB search
MRRSKADVERYISSVESLSPSQKEKPVKGFLFAKLYFEAKEYELAKRHILAYLTVQVRDP
KAHRFLGQLYELEGEIEKAVGCYKRSVDLNPAQRDLVLKVAELLCSKPEFDSRAEFWVEK
AAKLLPGHPAVFDLREKLLSVQGQRGWNQLYDLLQSELQLRPSDAHVNGRLVQLYCLDGR
LEEAAKHCLAVESTGVLRHSLDWYATVVQTLQEYVAQPSVSSNEKACRKFHKELLLAHSN
LLRLTVAEKDCRESVKALQNFDRAMQSLKNTASKAADELLEVFTEMRAHLYLYAGTLLLK
MAVEKEEQWRAVVDLAALCYLLAYQVPRPQKKPEKGERTSPRPLESLACYRQSQAGHMLL
NLNQETEHFVKEVVEVFGNRSGQDTLFEKLFSTQAPLDLSFIGNDIISNISTRSPDVQEL
AKWDSGSVLHCGDLQHLTWLGLQWSMMGQRPAVKDWLKQLFPRLTLETFKLDTNAPESIC
LLDLEVFLCGVVFTSHTQLQETAKISASSRLHEPRCLPSQLMKLLSSERQREWWDAVYSL
IHKKAIPNTSAKLRMIVQHGLSTLRAREKHGLQPALLIHWAKHLSVMGDGVNSYYDQKEY
VGRSVHYWHVVLPLLEKIEKRRSIPEPLDPLFMHFASKDIQVSEIKGYEEEAMMAFATLL
DIEGNTEQAILKLEKLNCISSYWHLAQIYQRLSEEAGNGVEETQEMCVSLLQQFRKYLSK
IYHAGADDMEKLPVSMEEIMDLLNEVNQQLGESGEAVDGVHEGLPMTSSPHSLTDPAVAA
SQKFSMSSPAKSVLSPSKRSVFSPKTPPHWVEDQKSLLQMLCQQVEALKNEVHDLRHNSS
GSTESPFHRVYGGNYAAEAFQEPFSATQSFHGVPLTVATTGPSVYYNQSPAYNSQYLLRT
AANVTPSKAPVYGMNRLPQPHMYAYQQPTHTPPLQTGACMYSQDQVFGTSIRFESPATSL
LSPYSEEYCSHVSQPSTNPALPEPGYFTKPTVIPAQSCKSSEGKSVDFKMNFGQQNPVET
SKPVTGAASQTTPTAAAFKFNSNFKSNDGDFTFSAVEVKNNSESLLGLLTSDIPPRPEGH
STLNSQSHDPTPSHSGVFTFGSKKGFSFVDGAQGKTTLFGKPDQTFSFANMTKPVTGEES
EEKCVESDDSTHVEEDEDGPHFEPIVPLPNKIDVKTGEEEEEEMFCNRAKLFRFEAETKE
WKERGIGSIKILKHKTSGKYRLLMRREQVLKICANHYITADMVLKPNAGSDKSWVWYAVD
YADEMQKTEQLAIRFKTADEAALFKQKFEEAQKDILKQPKLQSQLNENDSKPSTFEESSR
NVDLKTLFAKKESEWDCNVCAVRNNTSSKECVACSSPNPCGDLKAETKPDDGFKSAPAPS
TGAFMFGLGGSSKDAGDASFKAFGSQIPFSFKFGTPPTVTPSNQGETKSGQLEQNVDSNR
NVDLKTLFAKKEGEWDCNVCAVRNNSSSKECVACSSPNPCSDSKPDTKPADGFKSAPAPA
PSTGAFKFGLGGSSKDAGDASFKAFGSQIPFSFKIGSQAFSHGDAKRNEPSASTCVANQT
KTDAAPESTKQSASAACSIGSGFDKFIKKRGQWDCDNCLVRNEAAAANCVSCNAPCSSRK
NEAKWDCNVCLVRNEGTSSCCVSCKSPYLNANSTQAAPASSTFSFSTDGQANHPASTGFT
ANFEAGTFHFGQGKKDTPPTTQAETSSASSKSSISMPGLTSEFKFGIKGSESKPANSEPA
SVLLKNIAEQHREKEKEASSTSVQSADSLSNDDCPLITGKQVPFSFADLANSSQGNFQFG
QKDPSFKGFERAGEQLFTSFLQNQKADTSVDQEEEDMYRTEENDDIQFEPVVKMPEKVDL
VTGEEDEECLYTIRVKLFRFDNETHQWKERGVGNLKILKNNQNGRLRVLMRREQVLKVCA
NHWITTTMNLKPLSGSDRAWVWLANDFSDDDPKLEQLAAKFKTPELAEEFKQKFEACQRL
LLDIPLQTPHKLANSDRTANLIRKAEEMKSGLKDLKSFLTYDAVKGKHEESSVATANDIS
ALKSHGESTGPTLEWDNYGLQDDDHDESADTSICASPQASSPLQKNLFRFGESSAGFSFN
FQPILSPSKSPAKLNQSGTSVGTDDEQEISQEEERDGQYFEPVVPMPEVVELLNGEENEQ
VVFSHRAKLYRYDKDLNQWKERGIGDIKILQNYDTKRTRLVMRRDQVLKLCANHWIASDM
KLEPMKGAEKAWIWSAYDFAEGEGKVEQLAVRFKLLETANSFKEFFEKAKDAQEKAALLV
SASPREVLTSPQSLCGQAAIEVLEETTKEKTEQPSESSQAATQSPSPHISPLVSSPKFVF
GSSHLQKIFGSPVSPKQMVSSPATSLEDQASGSASSSKTAESKMTTPFKVPERASKIQED
VRNAGDSHDSDVEIVFEQQPTPEQADLAQKLMLPPTFFTYKNKPGYVSDDSDDEDYESAV
RNLNGKLYPDSAPPGPAQASGDAEEPECVLVWEKKPTLEEERKAKSLQLPLTFFCNASSD
TDTEPDRLEDFGTELQKVQQAQSEINSQEKPSESSSDQPATDDNGCPIDLSTKTHEPETP
TDSNTTQDAPSIFATGFSSELTFADLAKSSTDFAFGKKDPNFSWANAQAAVFSSTATASR
NEDEDEEGSDEDVSNSDIHFEPIVSLPEVEVKSGEEDEEILFKQRAKLYRWDRGLGQWKE
RGVGDLKILFHPVKKCYRVLMRREQVLKVCANHTITKNIELKPMNTSANALVWTANDYAE
GDGKVEQLAAKFKTADLAESFRKTFTDCQRCMSQVDSAQSSKVMELCRPSNPVVFFTIAA
DDEPLGKITMELFANVVPKTAENFRALCTGEKGFGYRNSIFHRIVPDFMCQGGDITRQDG
TGLKCIYGDKFEDENFEVRHTGPGILSMANHGRDTNSSQFFITLKKTEHLDFKHVAFGVV
KDGMDVVKQMGELGSKKGSPSKTIRVTDCGQL
NT seq
8919 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgaagtaaggcggacgttgaacgctacatttcttcagtagagagtctctctccg
tctcaaaaagagaaaccggtgaagggatttttatttgcaaaattatattttgaagccaag
gagtatgaactcgctaaaagacacatcttggcgtatttaaccgttcaggtcagagatccc
aaagcacatcggttccttggtcaactttatgaacttgaaggagaaattgaaaaagctgtt
ggatgttacaagcgctcggtggatctgaacccagcccagcgtgacctggttctgaaagtt
gccgagctgctgtgcagtaaaccggagtttgacagcagggcagaattctgggtggagaaa
gctgccaagcttttgccgggtcaccctgctgtcttcgacctacgggagaaattgctgagt
gtgcaggggcaaagaggctggaaccagctttatgacctgctgcagtccgagctccagctg
cgtccttctgatgcccatgttaacggcagactggtgcagctctactgcttggatggacgt
ttggaagaagcagcgaagcactgcctggctgtggaaagcactggagtcttaagacacagc
ctagactggtacgccactgttgtccagacgcttcaggagtacgtggctcaaccaagcgta
tcttctaacgaaaaggcatgtcgcaagttccacaaggagctcttgctggctcatagtaat
ctcctgaggctcacggttgctgaaaaagattgcagggagagtgtgaaggcgcttcagaat
tttgaccgtgctatgcagtctttaaagaacactgcctcgaaagctgcggacgagctcctg
gaggtgttcacagaaatgagagctcatctgtatctttatgctgggaccctgctgctgaag
atggccgtggaaaaggaggagcagtggagagctgttgtcgatttagcagcactctgttac
ctgctggcttatcaggttccaagaccacagaaaaagcctgagaaaggtgaacgcacgtca
ccgagacctctcgagtcattagcttgttatcgccaaagccaagcaggccacatgctgctg
aatctaaaccaggaaacggagcactttgtgaaggaggtggtggaggtgtttgggaacaga
agtgggcaggacaccctgtttgagaagcttttcagtacacaagcccctttggatctctca
ttcattgggaatgacatcatctccaacatcagcacacgatcaccggacgtacaagagctg
gcaaagtgggacagtggttccgtcttgcactgtggggatttgcaacacctgacatggctg
ggattgcagtggtcaatgatgggccagagacccgcagtgaaagactggctgaagcagctc
tttcctcgtctcactctggagacattcaaactggacaccaatgctccggagtcaatctgt
ctgcttgaccttgaggtgtttctgtgtggtgtggtgttcacaagtcacactcagctgcaa
gaaacagcaaagatttctgccagttcacgcctgcatgagcccagatgtttaccatcgcag
cttatgaaactcttgtcgtcggagagacagagggagtggtgggatgcagtctatagcctc
attcataaaaaagcaatacccaatacatctgctaaactgcgaatgatcgtccaacatggc
ctgagcaccctgcgagcgagagagaaacatggtcttcagcctgcgctgctcatccactgg
gccaaacatctcagtgtcatgggcgatggtgtgaactcctactatgaccagaaagaatac
gttggccgtagtgtgcactactggcatgttgtgctccctttgcttgagaaaattgagaag
agacgcagcattcctgagcccctcgatccattattcatgcatttcgctagtaaggacata
caggtttctgaaattaaaggctatgaagaggaggctatgatggcattcgctactcttctt
gacattgagggcaatactgagcaggccatcttgaagcttgagaagctcaactgcatctct
tcttactggcatcttgctcagatctatcagagactctctgaagaggcaggaaatggagtt
gaggaaactcaagaaatgtgcgtcagccttctccagcagttcaggaaatacttatcgaag
atctaccatgctggtgcagatgacatggagaagctgccggtgtcaatggaggaaattatg
gacttgctcaatgaggtcaatcagcagcttggagagagtggagaggctgtggatggagtt
catgaaggacttccaatgacttcaagcccacactccctcacagatccagctgtggctgct
tcccagaagttctcaatgtcctctccggccaaaagtgtcctctctccctctaagagatcg
gtgttttctcccaaaacaccccctcactgggtggaggatcaaaagtcacttttgcagatg
ctctgtcaacaagtcgaggctttgaagaacgaggttcatgatctgagacacaattcctct
ggatcaacagagtccccatttcacagagtgtatggagggaattatgcagcagaggcattt
caggagcccttttcagcaacgcagtcgttccatggagtgcctcttactgttgccactaca
ggtccttcagtgtactacaaccagtcccctgcatataattcacagtaccttcttcgcact
gctgcaaacgtaacaccatccaaggcacccgtctatggaatgaatcgtctccctcagccg
catatgtatgcctaccagcaaccaacacatacaccccctcttcaaacaggagcatgcatg
tactctcaagatcaggtttttggtacctccatcaggtttgaatcgccagctacaagcttg
ctgtccccatacagtgaagaatactgcagtcatgtttctcaaccatctaccaatccagcg
ttgccagaacctgggtatttcactaagccaactgtaatacctgctcagtcctgtaagagc
agtgaaggcaagtcagtggactttaagatgaactttggccagcaaaatccagttgagact
tctaagccagtgactggagctgcctcccaaacaactccaacagcagctgctttcaagttc
aattcaaacttcaaatctaatgatggtgactttactttctcagctgtagaggtgaaaaat
aacagtgaaagcctcttggggcttctgacttcagatattcctcccagacctgaaggccat
tcaaccctaaactctcagtcgcatgacccaacacccagccatagtggggtctttactttt
gggagtaaaaaaggcttttcatttgttgatggcgcacagggtaaaacaactctttttgga
aaacctgaccaaacatttagctttgcaaacatgaccaagccagtgactggagaggaaagt
gaagagaaatgtgtcgaaagtgatgacagcacccatgttgaagaggatgaggatggtcca
cattttgaacccattgttcctctgcccaataagattgatgtcaaaactggggaggaggag
gaagaagaaatgttctgtaacagagccaaattgttccgttttgaggcagaaacaaaagaa
tggaaagaaagaggcattggatctatcaaaatcctaaagcacaaaacatcaggcaaatat
cgattgctgatgaggagagaacaggttttaaaaatatgtgcaaatcactacatcactgca
gacatggttctgaaaccaaatgctggatctgataaatcatgggtatggtatgctgtggac
tatgctgatgaaatgcaaaagacagaacagctggctattcgttttaagactgcagatgaa
gcagctttattcaaacaaaaatttgaggaagctcagaaagatattcttaaacagccaaaa
ctgcaaagtcaactgaatgaaaatgactccaaaccttctacctttgaggaatcaagcaga
aatgttgatcttaaaaccctttttgctaagaaggaaagtgaatgggattgtaatgtctgc
gctgtaagaaataacacctcatcgaaagaatgtgttgcttgtagcagccccaatccttgc
ggtgacctgaaggctgaaactaaaccagatgatggatttaaaagtgctcctgcaccctca
acaggagcctttatgtttggacttggtggaagttctaaggatgccggtgatgccagcttc
aaggcatttggatcccagattcctttttcctttaaatttggaacaccgccaactgttact
ccgtccaatcagggtgagacaaagtctggtcaacttgagcaaaatgtggattcgaacaga
aatgttgatcttaaaaccctttttgctaagaaggaaggtgaatgggattgtaatgtctgc
gctgtaagaaataactcctcatcgaaagaatgtgttgcttgtagcagccccaatccttgc
agtgactcgaaacctgacactaaaccagctgatggatttaaaagtgcccctgctcctgca
ccctcaacaggagcctttaagtttggacttggtggaagttctaaggatgccggtgatgcc
agcttcaaggcatttggatcccagattcctttttccttcaaaattggatcacaggcattc
agtcacggtgatgcaaaaaggaatgagccttctgcaagcacttgtgttgcaaaccaaacc
aaaaccgatgcagctccagaatctaccaaacagtcggcaagcgctgcctgctctattggc
tctggatttgataagtttatcaaaaaaagaggtcagtgggattgtgataactgcctggtc
aggaatgaggcagctgcagcaaactgtgtttcttgtaatgctccttgtagcagcagaaaa
aatgaagcaaaatgggattgtaatgtctgtctagttagaaatgaaggcacatctagttgt
tgtgtgtcatgcaagagtccttatctaaatgcaaacagtactcaggctgcaccagcatcc
tccacctttagctttagtactgatggtcaagctaaccatcctgcaagtacagggtttaca
gccaactttgaagctggtacttttcactttggtcagggtaagaaagataccccaccaaca
actcaagctgaaacgtcttcagctagttcaaaatcctctatttcaatgccagggttaacc
agtgaatttaaatttggtattaagggctctgaatcaaagccagccaacagtgaacctgcc
tcagtgttgctgaaaaacattgctgaacaacacagagaaaaagaaaaggaagcatcctcc
acatctgtccagtcagcggacagtctaagtaatgatgattgtccactgattacaggaaag
caggttccattcagttttgcagacttggccaattcttcgcagggtaactttcaatttggc
cagaaggatcccagttttaaaggctttgagcgggctggtgagcaactttttacctccttt
ctgcaaaaccaaaaagcagacacctctgttgatcaagaagaggaagatatgtacagaaca
gaagaaaatgatgatatccagtttgagcctgtggttaagatgcctgaaaaagtcgatctt
gttacaggggaagaggatgaggaatgtctgtacacaatacgtgttaagcttttcaggttt
gataatgaaactcatcagtggaaagaacgaggggttggaaatctcaaaattcttaaaaat
aatcaaaacgggaggcttagagttctaatgagacgagagcaagtgctgaaggtgtgtgct
aatcactggatcactactacaatgaacctaaaacccctttctggctcagatcgtgcctgg
gtatggttagcaaacgacttttcagacgacgatcccaagttagagcagttggctgccaag
tttaaaactccagagcttgcagaagagtttaagcaaaagtttgaggcgtgccaacgactc
ctcttggacattcctctacagacccctcataagctggctaattcagaccgaacagcaaat
ctcatacggaaagctgaggaaatgaaatctggtcttaaggacctcaaatcattcttgact
tatgatgcagtgaaaggcaagcacgaggaaagcagtgttgcaacagcaaacgatatctca
gctctcaagtcccatggtgagagcactggacccactttggaatgggataattatggtttg
caagatgatgatcatgatgaaagcgctgacacatctatatgcgcttctccacaagctagt
agtccattgcaaaaaaatttgttccgttttggagaatcatcagctgggtttagtttcaac
ttccagcctatacttagtccctccaaatccccagcgaagctgaatcagagtgggacatct
gtcggaacagatgatgaacaagaaataagtcaagaagaggaaagagatggccagtacttt
gaaccagttgtgccaatgcctgaagtggttgagcttttaaatggagaagagaacgagcaa
gtcgtgttcagtcaccgagcaaagttgtatcgctatgataaagacctcaaccagtggaaa
gaaaggggtatcggagacatcaaaattttgcaaaactacgatacaaagcgcacaagactt
gtgatgagacgtgaccaggttcttaaattatgtgcaaaccactggatagcctcggatatg
aaacttgagccgatgaaaggagcagaaaaggcatggatctggagtgcttacgactttgct
gaaggagaaggaaaagttgagcagttggctgtgcggtttaaattgctggagactgcaaat
tctttcaaggaattttttgagaaggccaaggatgcccaggaaaaggcagcccttcttgtg
tctgcttcccctagagaagtcctgacttccccccaatccctgtgtggtcaagctgctatt
gaggtacttgaggagacgacgaaagaaaaaaccgaacagccttctgaaagcagtcaagcg
gctactcagagtccaagcccacacatctcccctttggtctcttcccccaagtttgttttt
gggtcaagtcatttgcagaaaatatttggaagcccagtgtcccctaaacagatggtttct
agtccagctacaagtcttgaagatcaagcatcgggcagtgcttcaagctctaaaacagct
gaaagcaagatgacgactccattcaaagtgccagaaagagcttctaagatccaggaggat
gtaaggaatgctggtgacagtcatgactctgatgttgaaattgtgtttgagcaacagcca
actccggagcaggcagacctcgcccaaaagctaatgctgccgccaacgttttttacttac
aaaaataagccaggatatgtgagtgatgatagtgatgatgaagattatgagagtgctgta
agaaatctaaacggaaaactgtatcctgattctgccccacctggccctgctcaggccagt
ggagatgcagaggagccggagtgtgtgcttgtctgggaaaagaaaccaacgttggaggag
gagagaaaagccaagagccttcagcttccccttaccttcttctgtaatgctagcagtgat
acggacactgaaccagacaggctagaggactttggaacagagctacagaaagtccagcaa
gctcagagtgaaataaacagtcaagagaaacccagtgagagctcttctgatcagcctgct
acagatgataatggctgtcctattgacctctcgacaaagacccatgaacctgaaacacca
actgactcaaatacaactcaagatgccccttctattttcgcaactggattttcaagtgaa
cttacatttgcagacttggcaaagagttctacagactttgcctttggaaaaaaagaccca
aacttctcctgggccaatgctcaggcagctgtctttagctccactgcaacagcttccaga
aatgaggatgaagatgaggagggcagcgatgaagatgtttctaacagtgacattcacttt
gagcccatcgtttccttacctgaggtcgaggtgaagtctggtgaagaagatgaggagatt
cttttcaagcagagggcaaaactgtacagatgggatcgtggtttgggccagtggaaagag
cgtggagttggtgatctgaagatcctcttccacccagtgaaaaagtgctaccgtgtcctg
atgaggcgtgagcaggttttaaaggtgtgcgccaaccacaccatcaccaagaacatcgag
ctgaaacccatgaacacttctgctaacgcactggtttggacggcgaacgactatgcagag
ggcgacggcaaggtggagcagcttgctgccaaatttaagaccgccgacttggccgaatcg
ttcaggaaaacctttacagattgtcagaggtgcatgtctcaagtggactcggcccagtct
tctaaagtcatggaactttgcagaccaagcaacccggtggtatttttcactatagctgct
gatgacgagccactcggcaagatcacgatggagctttttgccaacgttgtccccaaaact
gcggaaaacttcagagctttgtgcactggagagaaaggctttggctaccgcaattccatt
ttccacaggatcgtccctgatttcatgtgtcagggtggtgatataaccagacaggacggc
acggggttgaagtgtatctacggggacaagtttgaggacgagaactttgaagtgcgccac
acaggcccaggtatactgtccatggccaatcatggcagagacacaaacagctctcagttt
ttcatcacgttaaagaaaaccgagcatttggacttcaaacatgttgctttcggagtcgtc
aaagacggcatggatgtggtgaagcaaatgggagagctgggctctaagaaaggcagtcca
agcaaaacgataagagttacagactgtggacagctgtaa
DBGET
integrated database retrieval system
